Chy8G150620 (gene) Cucumber (hystrix) v1

Overview
NameChy8G150620
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description(thale cress) hypothetical protein
LocationchrH08: 11166726 .. 11168444 (+)
RNA-Seq ExpressionChy8G150620
SyntenyChy8G150620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGCAGCTCCACCAAATGCAATCAAGCTCGACGGTCAAATGCAGCTGATGCCGGAGCCACCCGCGGAGCCATCCCACTCCACTCGTCACTCCGTCCAGACGCTCGTGGTGCTGCTGGCGGCAATCACCATTTTAGGTGTCATTGCTCGAGTTTTCGCTCGCCTTTGCGGTGGAGGAACTGATGACAACATTGAAGGTTGGGTTCAAACAAGGTGCAACAGCTGCATTGACGGCAGCAGCCCCCCTGCTCCGCCGCTCCCGCCGTCGGAAGTGGCGGAGGAGGAGAAGAAGTGAGATCAGGTGGGTAGTATAGTAATTTCCAGGTTTTTTTCTTTAAGAAATTGGAAATTTTGTGTGATTGTATCGTAATGTAATGGAGCAGAAGGATTTCATGTGCTTTGCTTTCCTTCGTTTTCCCATTCTTCTTCTATTATTTTCCCTTTAAAATTTACTGACACACAATTTTCTTTAATTATTATTAGTTATAATTCTTTTAAATTAATTAATAGACATTTCATATGTATATCTAAAATTTAAAATCTAAATTGATAGAATTAATTTGGAGTTTGAATTGAAATAATGGTTAATTTATCGTTTAAATTAAGTTCCGAGTATAAATTGATATTTTTTTTAATTAAAATATAATTTCTGTCTCTATACTTTAGAAATAATTTTATTTTGGTTCAGAATTAATTTTATTTTGGTTCATGTACTTTCAAAATATCTAATTTTAGTAATGGTAATTTAAACAAATATTATAATTAGAATTTATTGATATATAGAATTTAAATTCAATGATTTATTTTTGTAAAGAAACATAGAAAATTAAAAGTACACAATGAAACCCAAATTCAAAGGCAAAATGAGAAAAAGGGGAAAAAGAAAAGTTAGGAAGTGAAGGGTCCCCCTAATTTCTTAAAATTTGGTACTTAAAATGCATTTGAATTTCCACTTTTGCAAAAGCTGTCTTCTTTATAAGCAGCTTTGATTTCTTGATATTATTCCTTTTGACAACATATCACTATTTCAAGGTATTATTGGTTTATGTTACAACTTACAAGGGTACAATACAAATGATGAACTCAACTCATTCACCATCGTCCACGTACAATTGTTTCAACCAAAAGAATAAACCACCATCCAATCAAGTCTCAATTAGGTTGTTTGATTGGTGCAACCCTTGGGTCTTTCAACTCTACTCAAATGAGCGGCCACGTTTTTCCTCTTTTATCGTTGAAGTTCAATCATCTATCTCAATAATTGTTGTATTTAAGAAAAAAGAATGTTAAGTTTTGTTTGTTTAAAATGTGTTGAATAGGTCATTAAAAACTTTCAGTTTTGTGTTTATCCCTAAAATTTTAATTGAGTGCCTATATTACTTTTTTTTTTTTTAGTTTAATTGTACATCTAGTTGGTCTTTGACTTATTTGACACTTTTCTAAATTTACAGATCTACTAAATACAAAATAGAATGTTTACAGTTAGATTACACATAAAAATCAATTTGAAATCTAATGTAATAAAAAATAGCAAGAACATTCAAAATTAAAAGTTTAGAAACTTGTTAAAGAGTTAATTCAAGAATCTACAAGACATATTAGAAACCTTCTTGATACAAAAATGAAAGTTTAGATGCTAAATTGTTATTGAAACTTTTTCATCTAGCTACTATGCTTATCTTACATCTTTTCTTTTAGGTTAGAAATCCTGTTTTAG

mRNA sequence

ATGAGGGCAGCTCCACCAAATGCAATCAAGCTCGACGGTCAAATGCAGCTGATGCCGGAGCCACCCGCGGAGCCATCCCACTCCACTCGTCACTCCGTCCAGACGCTCGTGGTGCTGCTGGCGGCAATCACCATTTTAGGTGTCATTGCTCGAGTTTTCGCTCGCCTTTGCGGTGGAGGAACTGATGACAACATTGAAGGTTGGGTTCAAACAAGGTGCAACAGCTGCATTGACGGCAGCAGCCCCCCTGCTCCGCCGCTCCCGCCGTCGGAAGTGGCGGAGGAGGAGAAGAAGTTAGAAATCCTGTTTTAG

Coding sequence (CDS)

ATGAGGGCAGCTCCACCAAATGCAATCAAGCTCGACGGTCAAATGCAGCTGATGCCGGAGCCACCCGCGGAGCCATCCCACTCCACTCGTCACTCCGTCCAGACGCTCGTGGTGCTGCTGGCGGCAATCACCATTTTAGGTGTCATTGCTCGAGTTTTCGCTCGCCTTTGCGGTGGAGGAACTGATGACAACATTGAAGGTTGGGTTCAAACAAGGTGCAACAGCTGCATTGACGGCAGCAGCCCCCCTGCTCCGCCGCTCCCGCCGTCGGAAGTGGCGGAGGAGGAGAAGAAGTTAGAAATCCTGTTTTAG

Protein sequence

MRAAPPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGGTDDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKKLEILF*
Homology
BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A0A0KWC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166970 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.4e-39
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 0

Query: 1  MRAAPPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGG 60
          MRAAPPNAIKLDGQMQL+PEPPAEPSHSTRHS+ TL+VLLAAITILGVIARVFARLCGGG
Sbjct: 1  MRAAPPNAIKLDGQMQLLPEPPAEPSHSTRHSLHTLLVLLAAITILGVIARVFARLCGGG 60

Query: 61 T-DDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKK 99
          T DDNIEGWVQTRCNSCIDGSSP     PPS+VAEEEKK
Sbjct: 61 TDDDNIEGWVQTRCNSCIDGSSP-----PPSQVAEEEKK 94

BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A5A7URI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00170 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MRAAPPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGG 60
          MRA PPNAIKLDGQMQL+PEPPAEPSHSTRHSVQTL+VLLAAITILGVIARVFARLC GG
Sbjct: 1  MRAPPPNAIKLDGQMQLLPEPPAEPSHSTRHSVQTLLVLLAAITILGVIARVFARLCDGG 60

Query: 61 TDDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKK 99
          TDD IEGWVQTRCNSCIDGSS PA   PPSEVAEEEKK
Sbjct: 61 TDD-IEGWVQTRCNSCIDGSSLPA---PPSEVAEEEKK 94

BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A1S3CEC8 (uncharacterized protein LOC103499518 OS=Cucumis melo OX=3656 GN=LOC103499518 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MRAAPPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGG 60
          MRA PPNAIKLDGQMQL+PEPPAEPSHSTRHSVQTL+VLLAAITILGVIARVFARLC GG
Sbjct: 1  MRAPPPNAIKLDGQMQLLPEPPAEPSHSTRHSVQTLLVLLAAITILGVIARVFARLCDGG 60

Query: 61 TDDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKK 99
          TDD IEGWVQTRCNSCIDGSS PA   PPSEVAEEEKK
Sbjct: 61 TDD-IEGWVQTRCNSCIDGSSLPA---PPSEVAEEEKK 94

BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A438JKT6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012350 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.8e-17
Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = 0

Query: 8   AIKLDGQM-QLMPEPPA--EPSHSTRHSVQTLVVLLAAITILGVIARVFARLC-----GG 67
           A+++D Q+  L+  PPA  EPSHST  S++TLVV+LA ITI+GVIA + ARLC     GG
Sbjct: 9   AVRMDEQLPPLVQAPPAVGEPSHSTHRSIETLVVVLAVITIVGVIAGIIARLCGGRHFGG 68

Query: 68  GTDDNIEGWVQTRCNSCIDGSSPPAPPLPP-----SEVAEEEKK 99
             +++IEGWV+ +C SCIDG  P APP PP        AEE KK
Sbjct: 69  NGENDIEGWVERKCRSCIDGGIPAAPPPPPPAEESKPAAEEAKK 112

BLAST of Chy8G150620 vs. ExPASy TrEMBL
Match: A0A5B6YV78 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_005108 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 8.1e-17
Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 0

Query: 9   IKLDGQM-QLMPEPP--AEPSHSTRHSVQTLVVLLAAITILGVIARVFARLC-----GGG 68
           ++LD Q+  LM  PP  AEPSHST  S++TLVV+LA ITI+GVIA + ARLC     GG 
Sbjct: 10  VRLDDQLPPLMDRPPAVAEPSHSTHRSIETLVVVLAVITIIGVIAGIIARLCGGRHFGGN 69

Query: 69  TDDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKK 99
            + +IEGWV+ +C SCIDG  P APP   ++ A EE K
Sbjct: 70  GEHDIEGWVERKCRSCIDGGIPAAPPPEAAKPATEEAK 107

BLAST of Chy8G150620 vs. NCBI nr
Match: XP_008460761.1 (PREDICTED: uncharacterized protein LOC103499518 [Cucumis melo] >KAA0056141.1 uncharacterized protein E6C27_scaffold697G00230 [Cucumis melo var. makuwa] >TYK14146.1 uncharacterized protein E5676_scaffold513G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (423), Expect = 1.30e-51
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0

Query: 1  MRAAPPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGG 60
          MRA PPNAIKLDGQMQL+PEPPAEPSHSTRHSVQTL+VLLAAITILGVIARVFARLC GG
Sbjct: 1  MRAPPPNAIKLDGQMQLLPEPPAEPSHSTRHSVQTLLVLLAAITILGVIARVFARLCDGG 60

Query: 61 TDDNIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKK 98
          TDD IEGWVQTRCNSCIDGSS PAPP   SEVAEEEKK
Sbjct: 61 TDD-IEGWVQTRCNSCIDGSSLPAPP---SEVAEEEKK 94

BLAST of Chy8G150620 vs. NCBI nr
Match: KGN53864.2 (hypothetical protein Csa_019149 [Cucumis sativus])

HSP 1 Score: 162 bits (411), Expect = 9.97e-50
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0

Query: 4  APPNAIKLDGQMQLMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGGGTDD 63
          +PPNAIKLDGQMQL+PEPPAEPSHSTRHS+ TL+VLLAAITILGVIARVFARLCGGGTDD
Sbjct: 8  SPPNAIKLDGQMQLLPEPPAEPSHSTRHSLHTLLVLLAAITILGVIARVFARLCGGGTDD 67

Query: 64 -NIEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEKK 98
           NIEGWVQTRCNSCIDGSSPP     PS+VAEEEKK
Sbjct: 68 DNIEGWVQTRCNSCIDGSSPP-----PSQVAEEEKK 98

BLAST of Chy8G150620 vs. NCBI nr
Match: XP_034693668.1 (uncharacterized protein LOC117920325 [Vitis riparia])

HSP 1 Score: 96.7 bits (239), Expect = 2.44e-23
Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 8   AIKLDGQMQ-LMPEPPA--EPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGG----G 67
           A+++D Q+  L+  PPA  EPSHST  S++TLVV+LA ITI+GVIA + ARLCGG    G
Sbjct: 9   AVRMDEQLPPLVQAPPAVGEPSHSTHRSLETLVVVLAVITIVGVIAGIIARLCGGRHFGG 68

Query: 68  TDDN-IEGWVQTRCNSCIDGSSPPAPPLPPSEVAEEEK 97
             +N IEGWV+ +C SCIDG  P  PP PP   AEE K
Sbjct: 69  NGENDIEGWVERKCRSCIDGGIPAPPPPPPPPPAEESK 106

BLAST of Chy8G150620 vs. NCBI nr
Match: XP_010653790.1 (PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera] >RVX09549.1 hypothetical protein CK203_012350 [Vitis vinifera])

HSP 1 Score: 95.9 bits (237), Expect = 4.64e-23
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0

Query: 8   AIKLDGQMQ-LMPEPPA--EPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGG----G 67
           A+++D Q+  L+  PPA  EPSHST  S++TLVV+LA ITI+GVIA + ARLCGG    G
Sbjct: 9   AVRMDEQLPPLVQAPPAVGEPSHSTHRSIETLVVVLAVITIVGVIAGIIARLCGGRHFGG 68

Query: 68  TDDN-IEGWVQTRCNSCIDGSSPPAPPLPP-----SEVAEEEKK 98
             +N IEGWV+ +C SCIDG  P APP PP        AEE KK
Sbjct: 69  NGENDIEGWVERKCRSCIDGGIPAAPPPPPPAEESKPAAEEAKK 112

BLAST of Chy8G150620 vs. NCBI nr
Match: PIN10285.1 (hypothetical protein CDL12_17132 [Handroanthus impetiginosus] >PIN20013.1 hypothetical protein CDL12_07302 [Handroanthus impetiginosus])

HSP 1 Score: 93.2 bits (230), Expect = 4.29e-22
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0

Query: 17 LMPEPPAEPSHSTRHSVQTLVVLLAAITILGVIARVFARLCGG-----GTDDNIEGWVQT 76
          L+  PP +PSHST HS++TLVV+LAAITI+GVIA V ARLCGG       + ++EGWV+ 
Sbjct: 7  LVEPPPVQPSHSTPHSIETLVVVLAAITIIGVIAGVIARLCGGQHFGGSGEHDVEGWVER 66

Query: 77 RCNSCIDGSSPPAPPLPPSEVAEEEKK 98
          +C SCID   P APP PP+    +E++
Sbjct: 67 KCRSCIDAGVPMAPPPPPTLPPPKEEQ 93

BLAST of Chy8G150620 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 9.5e-18
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 0

Query: 10  KLDGQMQLMP-----EPPA--EPSHSTRH-SVQTLVVLLAAITILGVIARVFARLCGG-- 69
           +LD Q+   P     +PP+  +PSH++ H S++TLVV+LA ITIL V+A VFARLCGG  
Sbjct: 7   RLDDQLSTTPTTIYIDPPSQDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRH 66

Query: 70  ---GTDDNIEGWVQTRCNSCID------GSSPPAPPLPPSEVAEEEKK 99
              G D +IEGWV+ +C SCID       ++P  PP PP   AEE  K
Sbjct: 67  LSHGGDHDIEGWVERKCRSCIDAGIPAVSAAPSPPPPPPPATAEERSK 114

BLAST of Chy8G150620 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 8.3e-06
Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0

Query: 26 SHSTRHSVQTLVVLLAAITILGVIARVFARLCGGGT-----DDNIEGWVQTRCNSCIDGS 85
          S +   ++   + +   +T+L V+A V  RLC G T     D ++E W ++RC SCIDG 
Sbjct: 24 SSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILGYGDYDMERWAESRCGSCIDGH 83

Query: 86 SPPAPPLP 89
            P  P P
Sbjct: 84 IHPHRPSP 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWC63.4e-3988.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G166970 PE=4 SV=1[more]
A0A5A7URI41.3e-3890.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEC81.3e-3890.82uncharacterized protein LOC103499518 OS=Cucumis melo OX=3656 GN=LOC103499518 PE=... [more]
A0A438JKT64.8e-1752.88Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_012350 PE=4 SV=1[more]
A0A5B6YV788.1e-1754.08Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_005108 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008460761.11.30e-5190.82PREDICTED: uncharacterized protein LOC103499518 [Cucumis melo] >KAA0056141.1 unc... [more]
KGN53864.29.97e-5087.50hypothetical protein Csa_019149 [Cucumis sativus][more]
XP_034693668.12.44e-2356.12uncharacterized protein LOC117920325 [Vitis riparia][more]
XP_010653790.14.64e-2354.81PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera] >RVX09549.1 hyp... [more]
PIN10285.14.29e-2254.02hypothetical protein CDL12_17132 [Handroanthus impetiginosus] >PIN20013.1 hypoth... [more]
Match NameE-valueIdentityDescription
AT3G57500.19.5e-1848.15unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G26520.18.3e-0635.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR33429OS02G0708000 PROTEIN-RELATEDcoord: 12..98
NoneNo IPR availablePANTHERPTHR33429:SF19FISSION REGULATOR-LIKE PROTEINcoord: 12..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G150620.1Chy8G150620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane