Chy8G146500 (gene) Cucumber (hystrix) v1

Overview
NameChy8G146500
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH08: 1642764 .. 1643591 (+)
RNA-Seq ExpressionChy8G146500
SyntenyChy8G146500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTCCTTCTCTCTTCTTCCTTCTTCCATTCTCGGAATCCCCATTTCTTCCTCCTCCTGATTCTCTGGTCACTTCCTTTTCTCTTTTTTCCTTCCATTGTTGATGCCATTACTTCTCTTTTTCTCACTTTTCTGTGTTTCCCTTTTTGACTCAGGACATTGCAAGGGAATTCAGATGCTCTACTCCTGCTGCTGCTGCGTCCGACTCTGTTTTTGTTTTGGTGCTTAGATCTCATTTGCTTCTTTTGCTTTCCTTTTTTCTTTCCCAGCTTTATTCCCTCTTTGTCTTTTTCTTTTTCTTTGTGTTTATCTTTTACTGCTCTCTAGATTTGGTTTTAAAACTTCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTTCTAATGAGCTTCGACTTCACTTTGGAACTATGGATGCTTTCTTCTTTTAACCTTTTTTAAGTTCCGTTTCATGCATCTTGCGTTTCTGTTATGCAATGTGAGATGATTATTTGTTAAAATATTTGGAAATCTCTTTTTCTCTTTAATTCTGTTTTGTTTTTTAGTTCTTGTGGTGTAGCGAGAGACCAGGTTTGGTTGTTGTTAGATCCTTGTAATTATGTTTTTCAATTAGTTTGAGGATACAGAGTATGGGATTCCTTCTATAGTTGCTGTAATATTCTGAATTTCTTTGTACCTTTTGGATTAATTTGAAGAGGATGGTGATTGAATGTTTGATTGCTGTAATCCTTGATTGAAGTTGGCTGCTACTGTTTCTGACTTTGAGATTATGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGA

mRNA sequence

ATGTTTCCTCCTTCTCTCTTCTTCCTTCTTCCATTCTCGGAATCCCCATTTCTTCCTCCTCCTGATTCTCTGGACATTGCAAGGGAATTCAGATGCTCTACTCCTGCTGCTGCTGCGTCCGACTCTGTTTTTGTTTTGGATACAGAGTATGGGATTCCTTCTATAGTTGCTTTGGCTGCTACTGTTTCTGACTTTGAGATTATGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGA

Coding sequence (CDS)

ATGTTTCCTCCTTCTCTCTTCTTCCTTCTTCCATTCTCGGAATCCCCATTTCTTCCTCCTCCTGATTCTCTGGACATTGCAAGGGAATTCAGATGCTCTACTCCTGCTGCTGCTGCGTCCGACTCTGTTTTTGTTTTGGATACAGAGTATGGGATTCCTTCTATAGTTGCTTTGGCTGCTACTGTTTCTGACTTTGAGATTATGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGA

Protein sequence

MFPPSLFFLLPFSESPFLPPPDSLDIAREFRCSTPAAAASDSVFVLDTEYGIPSIVALAATVSDFEIMMDLVHYDERLLIY*
Homology
[Close]
BLAST of Chy8G146500 vs. ExPASy TrEMBL
Match: A0A0A0L432 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572850 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1  MFPPSLFFLLPFSESPFLPPPDSLDIAREFRCSTPAAAASDSVFVLDTEYGIPSIVALAA 60
          MFPPSLFFLLPFSESPFLPPPDSLDIA EFRCSTP AAAS SVFVLDTE GIPSIVALAA
Sbjct: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA 60

Query: 61 TVSDFEIMMDLVHYDERLLIY 82
          TVSDFEI+MDLVHYDERLLIY
Sbjct: 61 TVSDFEILMDLVHYDERLLIY 81

[Close]
BLAST of Chy8G146500 vs. NCBI nr
Match: KGN54891.1 (hypothetical protein Csa_012629 [Cucumis sativus])

HSP 1 Score: 147 bits (372), Expect = 2.15e-44
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1  MFPPSLFFLLPFSESPFLPPPDSLDIAREFRCSTPAAAASDSVFVLDTEYGIPSIVALAA 60
          MFPPSLFFLLPFSESPFLPPPDSLDIA EFRCSTP AAAS SVFVLDTE GIPSIVALAA
Sbjct: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA 60

Query: 61 TVSDFEIMMDLVHYDERLLIY 81
          TVSDFEI+MDLVHYDERLLIY
Sbjct: 61 TVSDFEILMDLVHYDERLLIY 81

The following BLAST results are available for this feature:
BLAST of Chy8G146500 vs.
Match NameE-valueIdentityDescription
BLAST of Chy8G146500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4321.9e-3293.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572850 PE=4 SV=1[more]
BLAST of Chy8G146500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54891.12.15e-4493.83hypothetical protein Csa_012629 [Cucumis sativus][more]
BLAST of Chy8G146500 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy8G146500.1Chy8G146500.1mRNA