Chy6G122540 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G122540
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cytochrome c-type biogenesis ccda-like chloroplastic protein
Location	chrH06: 20124453 .. 20130689 (-)
RNA-Seq Expression	Chy6G122540
Synteny	Chy6G122540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCCCTAAACACCCTAACACACCAGGTATTACCTTTCATTTCGCTCTCTTACTATGGGAGTTGCGAATATTTATCGTTTCAAACAAGTCACCCAAACACTATTTGAAGATGTACACAATTTTTGGGTATTCATCATTATGTTTTCAACTCTCTTTTATACACAGGGTCACTGGTTTCTTTAGGTAAACATGTCATGCCCATGAAATTTCTTGGGAGACAATCCGCAGCTGATGATCAATGTAAAGATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGGTTAGGCTTTCGCACGAACACTTTAATTTCACATGTTTTGAACACTTGTGTTAATGCAATAAATGTGTTACGCATTCATAGAACACTTGTTGAGAAGACCAAACAGATGCATATATAAGAAGATAATAATAGATTTTTATTGGCAGTTGAATCACCGTTAATTAAATTCTGTGATTATGGTTATTATTATTTTTATGTGAAATACATCAAACTAAATTTTTTAAGCGTATAAATGCTTCAACTCATTTATTTTGAATTTTCTTCTGTTTTAAAAATGATACACACACATATCTATGTTTTTTTGAAAATGTATATTTTAATAATTGTATTCTTGCTTTGTCATGTCCTAAATTTTTAGATGGCTCGTCACTGTGTTTGTGGCACGTCTCGTATCCATAGTTATGCTTCTTAGGGCTTCTGCTCTCTTCCTGAGGTGGAAGATGGTTCTACTTCAATCTTGTTATAATAATTTATTCTCGTTCTTTTTCAATTCATTGTTTGTTCATTATTTAACTATGACTGGTAATTTCATAAGTAACTGTAAGCAATCAAATGTATAGGATCATAGGCAACCTCTTATTTTCCTTTTAAATCCTGCTTTTCACTCCAAGTAAATTAGTCTGTACTTTACCTGCTTCAATGCTGCTGTGGTTTAGCATGGATTTTCTTAATTTTATTTCGTTTTCAATATTCCAGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGTAAGAGTTAGTCGTGTATTGCGTTTTCTAAAGCCACATGAATCTATATTCTTTTGAGACTTTAATTCCCTAAAATCCATTTATTTAATTACTTTTAAAGATTTTCTACATTACTTTTCACCAGTTCCTTTTAAAATCTTGATGAAATGTATATGTATTTCTATTTTCCTTTGGACATATAGTCGTGAGATGTTTCTTTATTTGTAAGTGAGTTTCAATTGTTTATCCTTTATGATGACCAAGTTTTTTATTTTTCATTTATTTAGTTATTTCACTACTTTTTGGGGGTGAGGTATGGGTTTGCTAGATAAGAATGGTTAACTCATTATAACTTCAATAGAAAACAAAACTTGGTAATAGGACTGCTCTTTAGCATTACTTTCCAGCTTTGTTTGCTTGGTTAAGATGCTGGTCTCTATCAATTGGATATCATGGTAACTAAATTAGTCTGCGTATATATTATTGGTGTATAACTGTAAATTATATCAGGAACTAGAATTATTTTCCTTCAAGTCAGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGTATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGGTTCAGTCTTGTTTTTCTGCCATTTACATTTCATGTCTTTTAAGGATTTGAATTTGATAGTGAACGGCTTTTTTTCTATTTCTCTGCCCTTGATCACTTTATTCCTTTTTGCAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGTAAGCATCTTATACATATATTCTTGGAATCTTGGTATGTTATTTTCCTGTCATATGTTGATGTTGTGATCCAATGGAACTTTGTAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTAAATTACTTTCTACACGTGCTCCAATTTTCTTCTCTTTGCACTTGTGATTGTGGTATCAAATTATAGAAATCTCCAAATCAATTGAGCGCTAGATGTTTGATGATACATCCAAGATCTTAGGCTCAACCCTCTAGGTTGAAAGTTTAGGCCCTGCTTGATAACTATTTGATTTTGGTTTTGGTTTTTTGTTTTTTAAATATAAGATTATAAACACTACTTCCATCCATATGTTTCTATATTCTATTATCACTTTCTACTAACATTTACGGAAAACAAGCCACATTTTGAAAATTAGAAAAAAAAAGGTTTTTGTTATTAAAATTTGACTAAGAATTCAAGTGTTTATTTTACAAAAGTTAACCATAATTGAAATTTTTTTTAGAAAACGAGCTAAGATTTTAAACACAGAAAACCAAAAACCAAAATTGTTATCAAGCAGGGCCTTAATAGTTTATAACACTGGTTGTCATCTGTTAGTTGGGCTTTGGGTCGACAAAACGTTAATGAGATAAGTGGGGAAGGTCGTGAGTCTATTGTAAAGAGTGGGGCCCTTCAACACCCTGGTAATAGAAAAATAATAATAATAAACCAGGACTAGAAAGAAACTATTCAATGGTTCTTCGATGTCAGAGTTTTCATATCCTTTGCCTGTCCAGATTTATCATCATTGTTACTATATCTTCTAGTTAATTTGAACTTGAGAGCATTTTGTTAGGCCACCAATTATATTGCTATACCAAAGGAGGGGGGGTAAAGAGGGCATGGCTTATGTAATTGGCAGTGGTGGCTTCAACATCCAATAGTAATAGGTGTTCCCCACAGTTAGTTAGAGGAGGAGAGAGAGAGTATTTGTGTAGGAAGGGAAGACATTGGAAACACTTGATTTTCAATTGAGTCATCTTCTTGAGAGTGAAGAGGGAATCCTTGCTTCTGTGAGAGGCTGGATGTTGTGATTTCCCTTGGAGCAATCATTTCCATTTGAATAAGACTTCCTTATATCAGTACCTATCACATTTCTATTGAAATATATGCATCGATGTGAGCGGATGAGTAAGGGAACAGTAATAGAATAATTCTAAGGGCACAGTGGTAATTAGCTTTTGGTGCTTTGGTTATGAGGGAAGTTGGACACCTTAGGGCCGGGAGATCATTTTGATAAGACTGGACTCAGTGTATTTGTTGTAGGAGAGAGATAACCCTCTCAAAAGGCTATTGATATTGTAATTTCTTAATTGATATTGCAATGTAGTAATCTGATGAAACTCCTCTTGATCACGTCCGATCAAGAAGGATAACTCTGTTCGATAAGGGTGATTGCTTACCGAATACGAAAATTACAATAAGGAAAAGAAAACAAACAGAAAAGTTCTCCTCTGCTTTCCTCTCTCTCAAGGAATAGCCTGAGGTCACAACAAAATTCTAACTGCCCTCTCTCTCCATAACCAACTCCTATTTATACTCTATTATTTAATTACGAAAATACTACTACAATATTAGTGCTATTTCCTTTGGCACGTGCGTCATCCTTGCTTCTTCTTCCTTCTACTATACTGGTGTATAATTGGGGGTCTATCATAATCCTTAGTGTTTTTCACATATTTTCTGTGTTTGGTATCCCGACAGAGTCCTTATACTCTGATGGTTGGGGTGAATATGCATACATGTGAGATGGTTTTCATAGAAATGGTTGAAACTGTGCTGGTGGTCTTGCTTTGAGAAGGGAAGTTAAATGGAATTTGATCTCTTCATATTTTCAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTAGAGGTATGATTAGATATTCGAAGGGTACTTTGTTATATCATTACCTATGATTCATAATCATCTCTTTTGTGGAAATAATAATTAAATTTGTTTCATTATAAATGTTTCACTTATTTGTATTTTTTAGTGGGTTGCAGAATCTGATACCCAAGTACTCGGCTGCTTTTTTCACAATGTCGTTTTGGAATAGTCTTCTGATGGGTTGATTCTATAATTTGTCACGAAATGCAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGTAATTGGCCCTCCATTTCTTTTGGCTACTGGTTACTTACCTACCTGGATCCCCTAACAAGATTTTAAATCTGATGTATTAGGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGTGCCCAAAGTATTTCCTACACTGATTCAACTTTGATCTTAGTTTCAATAGATTGAATTATATGATTATTAAAGAATCCTTGAAATTAAAAAATGTCATGTATATATGATATTGACCGGTTGTGACTTTGATCGTGTTCTCTCTTAAACCTAGCCTTGGAGCTTTGAAACATTTTTAGTGAATCAGTAGGGCTGATAACCAACCTAATTGTGGAAGAAGGATGAAGTAATCCTTTTCCTTAGTGTTCCCTGTTAATGACTACTCTCTTTTATAATAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACTACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGGTAATATGGTTATACTAGGAAGGATAACTTACCTGCATATAGATATTTTGTTTGAATATACTATAAGTTTATTATGTGACCTTTTAAAAGTTTTCCCTTTTGTTATTTTTAATGCTCTAATTCATTGGAGATTGTTGTAGTCTCGGGTTTTATTATCTATAATATGACTCTTGTATGCCTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGGTAATTCCTTTTAAACTCATCTCTACTTAATTAAGATTACAAATTAAATGTTCAATTTCAAAAGTTTGGAACCACTATGAGTTGACTTAGTGGTAAAAAAAGAGATGGAGTCTTAATAAACTACATGGGTTTATTCCATGGCGTCCATTTACCTAAGAATTAATTTCGTACGAGTTTTTTTGACATTCAAATGTTGTAGAGTTAGATAGATTGTTTCATCAGATTAGTCAAGGTGCAGATAAGTTGGGTCGGATCCTCACAAGCATAAGAAAAAACATTCAAAAGTTTGGTTTTGAACACAGGAAAAAATAAAGATGTTCCAACTTCAAAATGCACCTCTTCTATAAAGTTATTCTAAACTCACATAAAAGAAAAAATTCCCCTAATATAGGAGTGTTGCAACGAAAACACATCCAAGAAAAAGTCAGGTTTGCTGGGAAAAAACGGTGCATAAGAACTAAATAAATCTTGCAAACTAATTACACATTAGATGCAATAATAATGTTTGAATTCAAAAGTAAGTAAGATGAAGCAACTAAAATCTATAAAGTGACATCTTTTTTATAACCGCTACTCACGACTATTATTCCCTCTGAATGAGTTGCAAGTAGACTCAATAATTCTCTTGGTACTTGGTAGTATACAATAACTAATTTTGGCAGAATAACAACCTCAAACTACTGGGATCTATTGTATACTTGTTCTCAACTCAATTTAGGATAAAAGATATGAGAGGTCTTCCAATTGGGATGAGATGAATAAACAATTTGCTCTTCATAGACTAAGAGTTTGGTAATCTTCTAAATACACAATAAAATCAAATAAAATACAAAACTGAATTATCTTTTCTTAAATATAAACAATATTCATCGAATGGTAGAAGAATTTAATCTAACTATTAATCCCATAAAAAATTCACCGTTTTCATCGTATCATAAAATATGCAACAAGATTTCACATTGAAGTATGGATTAAGTTTTTGAGTTGATATGTTTTGGTAGATGAAATAAGATAATGTTTTGAAGTGGGTTTTGTTTGTTGTTTGATGTTTGATGTATATGCAGTGGCGCATTACTATTGGGTGGAGGTATATATACGTTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

mRNA sequence

ATGAGTCTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCCCTAAACACCCTAACACACCAGGGTCACTGGTTTCTTTAGGTAAACATGTCATGCCCATGAAATTTCTTGGGAGACAATCCGCAGCTGATGATCAATGTAAAGATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGTATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTAGAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACTACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCATTACTATTGGGTGGAGGTATATATACGTTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

Coding sequence (CDS)

ATGAGTCTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCCCTAAACACCCTAACACACCAGGGTCACTGGTTTCTTTAGGTAAACATGTCATGCCCATGAAATTTCTTGGGAGACAATCCGCAGCTGATGATCAATGTAAAGATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGTATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTAGAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACTACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCATTACTATTGGGTGGAGGTATATATACGTTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

Protein sequence

MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVTMAM*

Homology

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BLAST of Chy6G122540 vs. ExPASy Swiss-Prot
Match: Q2RAR6 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA1 PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 4.5e-120
Identity = 240/350 (68.57%), Postives = 277/350 (79.14%), Query Frame = 0


Query: 16  IQISTPKHPNTPGSLVSL------GKHVMPMKFLGRQSAADDQCKDIELVKNRNSRNYFQ 75
           +  S P   ++PG+ V +      G  V      G +  A  +C    LV+ R       
Sbjct: 26  VSASKPSTSSSPGTGVLVGVPRERGSSVSKAAIRGARLEAAARC---SLVRQR------- 85

Query: 76  AMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVA 135
               +  ++  S +A  AA A  +     G++ +  LAD  +GDWFG +LYSAGQQAN A
Sbjct: 86  -PMLLATVAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSVGDWFGNLLYSAGQQANEA 145

Query: 136 VQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFS 195
           VQDQLSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFS
Sbjct: 146 VQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFS 205

Query: 196 LGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDP 255
           LGLATTLA+LG+ ASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF+++DP
Sbjct: 206 LGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDP 265

Query: 256 RSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYV 315
           R+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV
Sbjct: 266 RAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYV 325

Query: 316 VPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVT 360
            PLL+AASFAGALQSLLSFR++S+WINPISGA LLGGG+YT LDRLFP T
Sbjct: 326 APLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363

[Close]

BLAST of Chy6G122540 vs. ExPASy Swiss-Prot
Match: Q2QY07 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA2 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 7.7e-120
Identity = 227/283 (80.21%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 77  ISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSA 136
           ++  S +A  AA A  +     G++ +  LAD  +GDWFG +LYSAGQQAN AVQDQLSA
Sbjct: 77  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSA 136

Query: 137 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTL 196
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTL
Sbjct: 137 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 196

Query: 197 ALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANF 256
           A+LG+ ASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF+++DPR+AAAN 
Sbjct: 197 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 256

Query: 257 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAA 316
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AA
Sbjct: 257 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 316

Query: 317 SFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVT 360
           SFAGALQSLLSFR++S+WINPISGA LLGGG+YT LDRLFP T
Sbjct: 317 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358

[Close]

BLAST of Chy6G122540 vs. ExPASy Swiss-Prot
Match: Q9M5P3 (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana OX=3702 GN=CCDA PE=1 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 2.2e-119
Identity = 232/290 (80.00%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 75  NAISATSFLAVDAAKAETLKH-MWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQ 134
           + +   + + + +AKA  LK  + + A S+Y LA+G +GD  G  LYSA QQAN AVQDQ
Sbjct: 65  SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 124

Query: 135 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 194
           LSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLA
Sbjct: 125 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 184

Query: 195 TTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAA 254
           TTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIELQLPSFFNNFDPR+AA
Sbjct: 185 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 244

Query: 255 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLL 314
           ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL+
Sbjct: 245 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 304

Query: 315 LAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP-VTMAM 363
           +AASFAGALQSLLS RK S+WINPISGALLLGGG+YTFLDRLFP  TM M
Sbjct: 305 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of Chy6G122540 vs. ExPASy Swiss-Prot
Match: P51364 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=2787 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.6e-24
Identity = 71/238 (29.83%), Postives = 126/238 (52.94%), Query Frame = 0


Query: 118 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 177
           +LY++    N     QL+ ++  S + +F +G  TS SPC +S+LP+ + YI   G   S
Sbjct: 6   LLYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLS 65

Query: 178 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 237
           + + + N   F LG  ++   LG+ A+   K Y Q+  G+P+ ++ + + MG +LL I+ 
Sbjct: 66  QIDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIVP 125

Query: 238 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 297
           L      NN + R    N   +++ YL+G+   LA S CSTP+  TLL +V ++ +  IG
Sbjct: 126 LST----NNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIG 185

Query: 298 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRL 356
              +L Y+ GY+ P+++ + F+    +  S    ++   P SG +LL  G ++    +
Sbjct: 186 LIFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237

[Close]

BLAST of Chy6G122540 vs. ExPASy Swiss-Prot
Match: Q1XDC3 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=2788 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.9e-19
Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 0


Query: 119 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSK 178
           +Y++    N     QL+ L+ TS + IF +G  TSLSPC +S+LP+ + YI       + 
Sbjct: 7   VYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLNP 66

Query: 179 AEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 238
                N   F LG  ++   LGI A+   K Y Q   G+P  ++ + + MGLNLL I+ +
Sbjct: 67  INKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVHI 126

Query: 239 QLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGG 298
             P F           N   + + YL+G+   +A S CSTP+  TLL ++ +++    G 
Sbjct: 127 NSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTGL 186

Query: 299 SLLLTYTTGYVVPLLLAASFAGALQSL 326
             +L Y+ GY+ P+++ + F+ +   L
Sbjct: 187 IFILIYSIGYIFPIIIGSIFSTSFLKL 207

[Close]

BLAST of Chy6G122540 vs. ExPASy TrEMBL
Match: A0A0A0L5A0 (DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.8e-189
Identity = 355/362 (98.07%), Postives = 357/362 (98.62%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVK 60
           MS LVSNSGAFIINSIQIST KHPNTPGSLVSLGKHVMPMKFLG QS ADDQCK IELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL
Sbjct: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSL 300
           PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGGSL
Sbjct: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+YTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360

Query: 361 AM 363
           AM
Sbjct: 361 AM 362

[Close]

BLAST of Chy6G122540 vs. ExPASy TrEMBL
Match: A0A5D3BU70 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00980 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.6e-181
Identity = 346/365 (94.79%), Postives = 353/365 (96.71%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPK---HPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIE 60
           MS+L+SNSG FIINSI+IST K   HPNTP      GK+VMP+KFLGRQSAADDQCKDIE
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTP------GKYVMPIKFLGRQSAADDQCKDIE 60

Query: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120
           LV+NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG
Sbjct: 61  LVENRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
           ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFP 359

Query: 361 VTMAM 363
           VTMAM
Sbjct: 361 VTMAM 359

[Close]

BLAST of Chy6G122540 vs. ExPASy TrEMBL
Match: A0A1S3BSW3 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493358 PE=3 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.8e-181
Identity = 345/365 (94.52%), Postives = 353/365 (96.71%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPK---HPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIE 60
           MS+L+SNSG FIINSI+IST K   HPNTP      GK+VMP+KFLGRQSAADDQC+DIE
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTP------GKYVMPIKFLGRQSAADDQCEDIE 60

Query: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120
           LV+NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG
Sbjct: 61  LVENRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
           ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFP 359

Query: 361 VTMAM 363
           VTMAM
Sbjct: 361 VTMAM 359

[Close]

BLAST of Chy6G122540 vs. ExPASy TrEMBL
Match: A0A5A7TZQ7 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00300 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.8e-173
Identity = 336/365 (92.05%), Postives = 345/365 (94.52%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPK---HPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIE 60
           MS+L+SNSG FIINSI+IST K   HPNTP      GK+VMP+KFLGRQSAADDQCKDIE
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTP------GKYVMPIKFLGRQSAADDQCKDIE 60

Query: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120
           LV+NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG
Sbjct: 61  LVENRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
           ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYI  +    S
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIVNWNI-SS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
             +VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 YFQVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFP 358

Query: 361 VTMAM 363
           VTMAM
Sbjct: 361 VTMAM 358

[Close]

BLAST of Chy6G122540 vs. ExPASy TrEMBL
Match: A0A6J1CP79 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012907 PE=3 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.8e-164
Identity = 315/362 (87.02%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVK 60
           MSL++S+SG   INSI IS+ K   +     + GK+VMPMK LGRQSAA+D+ KDIELV+
Sbjct: 1   MSLVMSHSGGLGINSIIISSSKRLYSK----TRGKNVMPMKLLGRQSAAEDRSKDIELVE 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           N+NS  +FQAMAFVN ISAT+FL V+AAKAETLK MWEGAASVYTLADGG+GDWFG  LY
Sbjct: 61  NKNSSRHFQAMAFVNVISATNFLVVEAAKAETLKDMWEGAASVYTLADGGIGDWFGSFLY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNS+AFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+L
Sbjct: 181 VVGNSLAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSL 300
           PSFF+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP++GGSL
Sbjct: 241 PSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPIVGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINP+SGALLLGGG+YTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPVSGALLLGGGVYTFLDRLFPVTM 358

Query: 361 AM 363
           AM
Sbjct: 361 AM 358

[Close]

BLAST of Chy6G122540 vs. NCBI nr
Match: XP_004149294.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X3 [Cucumis sativus])

HSP 1 Score: 673 bits (1736), Expect = 4.33e-243
Identity = 355/362 (98.07%), Postives = 357/362 (98.62%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVK 60
           MS LVSNSGAFIINSIQIST KHPNTPGSLVSLGKHVMPMKFLG QS ADDQCK IELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL
Sbjct: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSL 300
           PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGGSL
Sbjct: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+YTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 360

Query: 361 AM 362
           AM
Sbjct: 361 AM 362

[Close]

BLAST of Chy6G122540 vs. NCBI nr
Match: XP_031738651.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis sativus])

HSP 1 Score: 666 bits (1718), Expect = 3.11e-240
Identity = 355/369 (96.21%), Postives = 357/369 (96.75%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVK 60
           MS LVSNSGAFIINSIQIST KHPNTPGSLVSLGKHVMPMKFLG QS ADDQCK IELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMW-------EGAASVYTLADGGMGD 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMW       EGAASVYTLADGGMGD
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWNYFPSSQEGAASVYTLADGGMGD 120

Query: 121 WFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 180
           WFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG
Sbjct: 121 WFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 180

Query: 181 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 240
           SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL
Sbjct: 181 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 240

Query: 241 EIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 300
           EIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD
Sbjct: 241 EIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 300

Query: 301 PVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLD 360
           P+IGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+YTFLD
Sbjct: 301 PIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLD 360

Query: 361 RLFPVTMAM 362
           RLFPVTMAM
Sbjct: 361 RLFPVTMAM 369

[Close]

BLAST of Chy6G122540 vs. NCBI nr
Match: XP_011650559.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis sativus] >KGN56224.2 hypothetical protein Csa_010801 [Cucumis sativus])

HSP 1 Score: 656 bits (1693), Expect = 1.24e-236
Identity = 349/362 (96.41%), Postives = 351/362 (96.96%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVK 60
           MS LVSNSGAFIINSIQIST KHPNTPG      KHVMPMKFLG QS ADDQCK IELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPG------KHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILY 120

Query: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180
           SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE
Sbjct: 121 SAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAE 180

Query: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240
           VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL
Sbjct: 181 VVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQL 240

Query: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSL 300
           PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGGSL
Sbjct: 241 PSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSL 300

Query: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFPVTM 360
           LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+YTFLDRLFPVTM
Sbjct: 301 LLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTM 356

Query: 361 AM 362
           AM
Sbjct: 361 AM 356

[Close]

BLAST of Chy6G122540 vs. NCBI nr
Match: XP_031738652.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Cucumis sativus])

HSP 1 Score: 649 bits (1675), Expect = 8.87e-234
Identity = 349/369 (94.58%), Postives = 351/369 (95.12%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPKHPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIELVK 60
           MS LVSNSGAFIINSIQIST KHPNTPG      KHVMPMKFLG QS ADDQCK IELVK
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKHPNTPG------KHVMPMKFLGTQSVADDQCKHIELVK 60

Query: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMW-------EGAASVYTLADGGMGD 120
           NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMW       EGAASVYTLADGGMGD
Sbjct: 61  NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWNYFPSSQEGAASVYTLADGGMGD 120

Query: 121 WFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 180
           WFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG
Sbjct: 121 WFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 180

Query: 181 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 240
           SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL
Sbjct: 181 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 240

Query: 241 EIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 300
           EIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD
Sbjct: 241 EIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 300

Query: 301 PVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLD 360
           P+IGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+YTFLD
Sbjct: 301 PIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLD 360

Query: 361 RLFPVTMAM 362
           RLFPVTMAM
Sbjct: 361 RLFPVTMAM 363

[Close]

BLAST of Chy6G122540 vs. NCBI nr
Match: TYK03271.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 647 bits (1669), Expect = 6.27e-233
Identity = 346/365 (94.79%), Postives = 353/365 (96.71%), Query Frame = 0


Query: 1   MSLLVSNSGAFIINSIQISTPK---HPNTPGSLVSLGKHVMPMKFLGRQSAADDQCKDIE 60
           MS+L+SNSG FIINSI+IST K   HPNTPG      K+VMP+KFLGRQSAADDQCKDIE
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPG------KYVMPIKFLGRQSAADDQCKDIE 60

Query: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120
           LV+NRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG
Sbjct: 61  LVENRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
           ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFP 359

Query: 361 VTMAM 362
           VTMAM
Sbjct: 361 VTMAM 359

[Close]

BLAST of Chy6G122540 vs. TAIR 10
Match: AT5G54290.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-120
Identity = 232/290 (80.00%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 75  NAISATSFLAVDAAKAETLKH-MWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQ 134
           + +   + + + +AKA  LK  + + A S+Y LA+G +GD  G  LYSA QQAN AVQDQ
Sbjct: 65  SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 124

Query: 135 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 194
           LSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLA
Sbjct: 125 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 184

Query: 195 TTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAA 254
           TTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIELQLPSFFNNFDPR+AA
Sbjct: 185 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 244

Query: 255 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLL 314
           ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL+
Sbjct: 245 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 304

Query: 315 LAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP-VTMAM 363
           +AASFAGALQSLLS RK S+WINPISGALLLGGG+YTFLDRLFP  TM M
Sbjct: 305 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of Chy6G122540 vs. TAIR 10
Match: AT5G54290.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-120
Identity = 232/290 (80.00%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 75  NAISATSFLAVDAAKAETLKH-MWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQ 134
           + +   + + + +AKA  LK  + + A S+Y LA+G +GD  G  LYSA QQAN AVQDQ
Sbjct: 66  SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 125

Query: 135 LSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLA 194
           LSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLA
Sbjct: 126 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 185

Query: 195 TTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAA 254
           TTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIELQLPSFFNNFDPR+AA
Sbjct: 186 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 245

Query: 255 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLL 314
           ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL+
Sbjct: 246 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 305

Query: 315 LAASFAGALQSLLSFRKFSSWINPISGALLLGGGIYTFLDRLFP-VTMAM 363
           +AASFAGALQSLLS RK S+WINPISGALLLGGG+YTFLDRLFP  TM M
Sbjct: 306 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 355

The following BLAST results are available for this feature:

BLAST of Chy6G122540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2RAR6	4.5e-120	68.57	Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa s...	[more]
Q2QY07	7.7e-120	80.21	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa s...	[more]
Q9M5P3	2.2e-119	80.00	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thal...	[more]
P51364	3.6e-24	29.83	Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=...	[more]
Q1XDC3	5.9e-19	30.92	Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=...	[more]

BLAST of Chy6G122540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5A0	2.8e-189	98.07	DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 S...	[more]
A0A5D3BU70	1.6e-181	94.79	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A1S3BSW3	4.8e-181	94.52	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A5A7TZQ7	2.8e-173	92.05	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A6J1CP79	1.8e-164	87.02	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Momor...	[more]

BLAST of Chy6G122540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149294.1	4.33e-243	98.07	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X3 [Cucumis...	[more]
XP_031738651.1	3.11e-240	96.21	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis...	[more]
XP_011650559.1	1.24e-236	96.41	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis...	[more]
XP_031738652.1	8.87e-234	94.58	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Cucumis...	[more]
TYK03271.1	6.27e-233	94.79	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis...	[more]

BLAST of Chy6G122540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54290.1	1.6e-120	80.00	cytochrome c biogenesis protein family	[more]
AT5G54290.2	1.6e-120	80.00	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003834	Cytochrome C biogenesis protein, transmembrane domain	PFAM	PF02683	DsbD	coord: 145..352 e-value: 9.8E-45 score: 153.1
None	No IPR available	PANTHER	PTHR31272	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	coord: 65..362
None	No IPR available	PANTHER	PTHR31272:SF6	CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN	coord: 65..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G122540.1	Chy6G122540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane