Chy6G112380 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGTTTATCAGGACCTCGTCTCTGGTAATTCTTCTTTTTTCTCAATTATTTTATGCATTTTTTCGGCTTTCTATTGTTCTAGTTCTAGGGCCTCGATCTTCCCGTTCTTAGGGTTTTCTTTTCCCTTCTTGGATCTGTGATTTATATGGATTCCTCTGTCACCGTTTGGATCTGGAACATATTTTAGACCAATGGGTTTTTGCATTCACTGTTCAATTTGATTCGCTTTGGATTTTCTAGTACTTCTGTGTTATGGGGTTAGTTTATTATCAGCTTGGCTGTTAAAAGGGATGTTTTTTTAGTTTGTGATTGTTGTTGAAGACAGCTGTTTCTTGTGGCTGGAGTATCTAATAACTGAGATTGTGTCTTTTTGGGATGAAAATAGTTTTTTTTTTTTTTTTTGGAGTTATGCATAGATATTAGGAGATGAAATTGGAGTATTGACGATTGAGTATTGGGTTATTTTCTCTTCAATTCTATGATTGAAGAAGTGTTTTCTTTATGATTGATTATCTTCTAGATGATTTGATGTTGTAGTAGTATTTCTTTGGGTTTCATTCATTTACATTGTGGACTTATTTCAACTTTCATATCAGGTGACGAGCTTCTCTCGGATTCGTTTCCATACAAGGAAATTGAGAATGGAATGATTTGGGAAGTTGAAGGAAAGGTTTGTTATTTCTTTTTTACTTTCATCTTTTTTTTCTTTCGACATAGGAACAATTTTTCTTGCAAAGAAGGTTGTATCTTAATGGTACCAAGTTTTTAATTAAATAAGCAAAGTATGTTAGTTAAATTGAATGGATATTCAGCACAATGTTTTACTCTTTTCTTACATTGTTTTACTGTAGTGGGTCGTTAAAGGAGCAGTTGATGTGGATATCGGTGCTAATCCTTCAGCTGAAGGTGGCGGTGAAGATGAAGGTGTTGATGATCAGGCTGTGAAGGTGGTCGACATTGTTGACACCTTCCGTCTTCAGGTAGGCATGCTCCTGGTTTTCAAGGGTTATTGAAAGCATTTAAACAGAATTTATGTATTTGTTTTTGTCAATTTGGGTTTCCAGGAGCAACCTTCCATGGACAAGAAGGTTTTCCTCACATGCATTAAGAAGTATATCAAAAAATTGACACCTTTGCTGAAAGGAGAGCAACAAGAGGCATTTAAGAGTAAAATTGAGGGAGCAGTTAAGTTCCTGCTTCCAAAGGTCAAGGACTTGCAATTGTAAGTACTTCTGCAGTTATCTGTGTCTCTATTTTTGTTGAACCAAAGATTTTGATTTTGCTGCATCCTTGATTTAGGCAAACCAAATCTAACAAATTATGGTCAGTTTAGTTATTGTTGTACATTTAGAATGTTTTGCATTGTGCTTGTGGTGTCGTGAACTGTGGAACAACTCTTGAGCAAATATCATGCTGCTTAAAGCACCTGCCTGCTCCTAAAAGCACGAACAGTGCCAATCAAGTGACAGTGTTTTTAATACTTTCACCCTTCTAAAAGTCGGCACTAAACTGATCATTATCCAAAATTTATGTATAGAAAAGAGAATTGAACTTGAAAGCCAACACTAACAGAGCATAGCGTAGTAAATAAAAACAGACGATTCACGTGTATGTTAATTCTGAGTTTGTGTTTGGTAAGAACTGATAGGCATGGACTCCTTCCAAATCAAGTTTCTGAATTATTAGAATGATTCCTTACAAACTCTATTCACTTTTGCAGCTTCGTTGGGGAGAGTATGGCCGATGACAGCGCTATGGTATTTGCATACTACAAGGAAGGAGCTACTGACCCAACATTCTTATACATTGCTCCTGGTTTGAAGGAAGTCAAGTGCTGA ATGTTGGTTTATCAGGACCTCGTCTCTGGTGACGAGCTTCTCTCGGATTCGTTTCCATACAAGGAAATTGAGAATGGAATGATTTGGGAAGTTGAAGGAAAGTGGGTCGTTAAAGGAGCAGTTGATGTGGATATCGGTGCTAATCCTTCAGCTGAAGGTGGCGGTGAAGATGAAGGTGTTGATGATCAGGCTGTGAAGGTGGTCGACATTGTTGACACCTTCCGTCTTCAGGAGCAACCTTCCATGGACAAGAAGGTTTTCCTCACATGCATTAAGAAGTATATCAAAAAATTGACACCTTTGCTGAAAGGAGAGCAACAAGAGGCATTTAAGAGTAAAATTGAGGGAGCAGTTAAGTTCCTGCTTCCAAAGGTCAAGGACTTGCAATTCTTCGTTGGGGAGAGTATGGCCGATGACAGCGCTATGGTATTTGCATACTACAAGGAAGGAGCTACTGACCCAACATTCTTATACATTGCTCCTGGTTTGAAGGAAGTCAAGTGCTGA ATGTTGGTTTATCAGGACCTCGTCTCTGGTGACGAGCTTCTCTCGGATTCGTTTCCATACAAGGAAATTGAGAATGGAATGATTTGGGAAGTTGAAGGAAAGTGGGTCGTTAAAGGAGCAGTTGATGTGGATATCGGTGCTAATCCTTCAGCTGAAGGTGGCGGTGAAGATGAAGGTGTTGATGATCAGGCTGTGAAGGTGGTCGACATTGTTGACACCTTCCGTCTTCAGGAGCAACCTTCCATGGACAAGAAGGTTTTCCTCACATGCATTAAGAAGTATATCAAAAAATTGACACCTTTGCTGAAAGGAGAGCAACAAGAGGCATTTAAGAGTAAAATTGAGGGAGCAGTTAAGTTCCTGCTTCCAAAGGTCAAGGACTTGCAATTCTTCGTTGGGGAGAGTATGGCCGATGACAGCGCTATGGTATTTGCATACTACAAGGAAGGAGCTACTGACCCAACATTCTTATACATTGCTCCTGGTTTGAAGGAAGTCAAGTGCTGA MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLTCIKKYIKKLTPLLKGEQQEAFKSKIEGAVKFLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC* Homology
BLAST of Chy6G112380 vs. ExPASy Swiss-Prot
Match: Q9M5I8 (Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP PE=2 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 3.9e-90 Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy Swiss-Prot
Match: Q2PS27 (Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=TCTP PE=2 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 7.6e-78 Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2) HSP 1 Score: 285.0 bits (728), Expect = 5.4e-76 Identity = 136/168 (80.95%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy Swiss-Prot
Match: Q6DUX3 (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum OX=4081 GN=TCTP PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74 Identity = 134/168 (79.76%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy Swiss-Prot
Match: Q944T2 (Translationally-controlled tumor protein homolog OS=Glycine max OX=3847 GN=TCTP PE=2 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 4.3e-73 Identity = 134/168 (79.76%), Postives = 147/168 (87.50%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy TrEMBL
Match: A0A0A0L917 (TCTP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G154390 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 7.6e-89 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy TrEMBL
Match: A0A5A7U7F8 (Translationally-controlled tumor protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001090 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.4e-87 Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy TrEMBL
Match: A0A1S2XAH9 (translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.4e-87 Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy TrEMBL
Match: A0A6J1GXJ9 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111458073 PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 4.3e-76 Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Chy6G112380 vs. ExPASy TrEMBL
Match: A0A6J1ICB3 (translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474201 PE=3 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 9.6e-76 Identity = 142/168 (84.52%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Chy6G112380 vs. NCBI nr
Match: XP_004134215.1 (translationally-controlled tumor protein homolog [Cucumis sativus] >KGN57117.1 hypothetical protein Csa_009848 [Cucumis sativus]) HSP 1 Score: 331 bits (848), Expect = 3.30e-114 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Chy6G112380 vs. NCBI nr
Match: NP_001284461.1 (translationally-controlled tumor protein homolog [Cucumis melo] >Q9M5I8.1 RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP [Cucumis melo] >AAF40198.1 translationally controlled tumor protein-related protein [Cucumis melo] >KAA0049501.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa] >TYK16181.1 translationally-controlled tumor protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 327 bits (837), Expect = 1.57e-112 Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Chy6G112380 vs. NCBI nr
Match: XP_038878221.1 (translationally-controlled tumor protein homolog [Benincasa hispida]) HSP 1 Score: 288 bits (738), Expect = 1.95e-97 Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Chy6G112380 vs. NCBI nr
Match: XP_022956345.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526154.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo] >KAG6582209.1 Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018608.1 Translationally-controlled tumor protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288 bits (738), Expect = 1.95e-97 Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Chy6G112380 vs. NCBI nr
Match: XP_022937958.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973732.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_022975167.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_023539947.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287 bits (735), Expect = 5.59e-97 Identity = 142/168 (84.52%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Chy6G112380 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein ) HSP 1 Score: 262.7 bits (670), Expect = 2.0e-70 Identity = 129/168 (76.79%), Postives = 141/168 (83.93%), Query Frame = 0
BLAST of Chy6G112380 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein ) HSP 1 Score: 258.5 bits (659), Expect = 3.9e-69 Identity = 126/169 (74.56%), Postives = 146/169 (86.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|