Chy6G111100 (gene) Cucumber (hystrix) v1

Overview
NameChy6G111100
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH06: 3943454 .. 3943932 (+)
RNA-Seq ExpressionChy6G111100
SyntenyChy6G111100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATATCTGAGGCTTGGATGAATCGTTTGCAATGGTCTCTAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTCCCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCAAACAAATTGAGGGGCTAGTAAAAGCAAACCATCTTCCCAAGAACATGAAGCCACATAAAATCTAAGAAGTATTTATATGCCTAGGTTAAGAAAAACAACACAACCTGTAACGAATGAATTAACTCATTGAAGCATAGCATCAAACAGATGGTCTGCATTAAACGAATGAATCGAAAGGCATTGCAAAACCTATTCTCAGTCGGAGCCGCAAGCTGCAAGCAAAACATGAACATGTTTCCCAAAGAGATGAAAGAAAATAAACCATACTTGATTCAAGCTGTAATGTCCTAGGATTCAGAATCTGGATTCGGTATTTGATGGTCCTCCCACTCTCCTACCATTCCAAGGGTACTCAACCTAA

mRNA sequence

ATGGGGATATCTGAGGCTTGGATGAATCGTTTGCAATGGTCTCTAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTCCCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCAAACAAATTGAGGGGCTAGATTCAGAATCTGGATTCGGTATTTGATGGTCCTCCCACTCTCCTACCATTCCAAGGGTACTCAACCTAA

Coding sequence (CDS)

ATGGGGATATCTGAGGCTTGGATGAATCGTTTGCAATGGTCTCTAATGACCTATCCTTTCATTCTCACTTCCAAGGCTTCCCTTAGGCAATGCTTTTGTGCAAAAGCTGCAGGACTCAAACAAATTGAGGGGCTAGATTCAGAATCTGGATTCGGTATTTGATGGTCCTCCCACTCTCCTACCATTCCAAGGGTACTCAACCTAA

Protein sequence

MGISEAWMNRLQWSLMTYPFILTSKASLRQCFCAKAAGLKQIEGLDSESGFGI*WSSHSPTIPRVLNLX
Homology
[Close]
BLAST of Chy6G111100 vs. ExPASy TrEMBL
Match: A0A0A0L7J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146690 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 1  MGISEAWMNRLQWSLMTYPFILTSKASLRQCFCAKAAGLKQIEGLDSESGFGI 54
          MGISEAWM+RLQWS MTYPFILTSKA LRQCFCAKAAGL+QIEGLDSESGFG+
Sbjct: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGL 53

[Close]
BLAST of Chy6G111100 vs. NCBI nr
Match: KGN56984.1 (hypothetical protein Csa_010863 [Cucumis sativus])

HSP 1 Score: 103 bits (256), Expect = 3.62e-27
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 1  MGISEAWMNRLQWSLMTYPFILTSKASLRQCFCAKAAGLKQIEGLDSESGFGI 53
          MGISEAWM+RLQWS MTYPFILTSKA LRQCFCAKAAGL+QIEGLDSESGFG+
Sbjct: 1  MGISEAWMSRLQWSPMTYPFILTSKAYLRQCFCAKAAGLEQIEGLDSESGFGL 53

The following BLAST results are available for this feature:
BLAST of Chy6G111100 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G111100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7J74.4e-1990.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146690 PE=4 SV=1[more]
BLAST of Chy6G111100 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56984.13.62e-2790.57hypothetical protein Csa_010863 [Cucumis sativus][more]
BLAST of Chy6G111100 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G111100.1Chy6G111100.1mRNA