Chy5G104700 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAACAGGCTTTTTGGTAAACCTAAACAAGAAGCCAATGCTTTGGCTACGTTAGAAAAGCTAAGCGAGGTGCGGTCTCATTTTGTGATTGTAGTTTTTTAGATTGATATTCTTTTTATGGAAACGATATTTTATTGTATGTCGTTTGTTTTGAGCTCTTGCTCTATTTCAACAATTTTGATGTATGCTTGACTTCTCGATCATTCATCTTTTCCAAATGGCAGTGTTTCGGACGTCGGTTTGATTGGTTCTCACGTCTCCTTGACCGTGTATTAGTGTTTATTTGGTTTGTACTTGGTCAAGTGGTGGTTTCCGGTTGAAATTTTTTCCGTGTTTGAATTGGATTAATTGTTAATTTTTTTTTGTTGTTGTTGTTCTGTGAATGGTAATCGATGTGTTTTAGGTGAAATTACACTTATGTAAGTTAATTGGTTGTTATTTTTCTATGCTACCATATTGAAAGAATAGATAATTGGAATCATGTCCGAAATGATTGTACTTGTGATTGCATAGACTTTTGTAGTCTTGCAAAGTTTTTCGTAATTGATACCAATGTTTCTGGGTACTCTTTTTTATTGTCTGTAATTCTCTGTTTAGACACTTGAAATGCTGGAGAAGAAAGAGAATGTTCTTGTGAAGAAGGCAGCTGCAGAGGTCGAAAGAGCTAAAGAATTCACAAGAGGGAAGAATAAACGAGGTATGGTCTGAAATTGTGAGTACAGAAGCAGTATGGATTTTTGTTTCCTTTGTTAGCATTTCTTACATGTGTGACGTGTGAATAAGATTTCATTAATACCTATATTATTCGCTCTTAGGTGTAAAATTGTTGGCAGCACCATATCTGTTTTCTCATGATTTGGTATTGCAATTTGTGCATATGTCAATCCTTTGCAATGTGATAATCTGCAGAAACTTTTTAAAGCTGTCTTTCGTATACAGTTTTGTTCATTATTATTAGGAGAATCTTTCAAGGAATCCTTCGACTCTGTATCTCTATGAAATTAATTTTGATTTTATAAAAATTGTCCATGTTAATCTCAAGACTCTGTATTGAGTCAAGGTTTTACTGTTATATCAGTAAAATTGCTAGATAGGCTTGCATGGTTGGTCGTTCTGCCTTGTGCTTTTCTGGCTTTTGCTACTGTCTTTATGGCTTGCAGTTGAAATGTAACCTTTCTATTTCCTTTATAATAGGGTTGTGTATGGCTAAGATTTGTAGCCTTGATTACTTCAATGCTTCGTTTTCGCTTTCTGTCCTTTTTAGATTTTTTTTAGATTTGCCTTGTTCTTATCATTATTAGTAGCTTTGGGTAATCGTTTTCAAATAGTTTAATTTTGTAGTTCTTTGTCTCTTTTGTTGAGAACTGTAGCTTTGGAGATTGTTCTGTTTGCCTCTTTTTAATCTATATTTTTCCTTTTCAATCTTCTTTTTTATTTATTTTTATCAAAATCATTGTTACCTTTTGTTCTTGCTTATTTTCAACTCCCTATTTTACATTCTGTCCATATCTTATAGAGGCCTTGCATATTGAATAGTTTTGTTTAGGAATTAAATATTTGTTCTATATACAAAAATTAACGTCTGAAAATTAATGAACTATTTGTAAATCTTACAGGTTGTATATAATAATCGAATTTACATAATTAATTAATTAGATTGGACCCAATAGATTACTGATACTGAATTATATAAAATATCCATCATAGATCAAACCTTATGTAATTCAGTATATGATTATGTTTTATTTGGCTTCTGTTTTTAAGAGTCCATTCATAGTCAATATAATTTGTTTCCAGCGGCTATACAATGTTTGAAGAGAAAGAGGCTTTATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAATTGCGCATCCATGATCAAGTGAGTTGTAGTTGTTATTTACAGATTGATGAGACATCAACTTCTTTCTTTTACTAACTTTACCTAGAATTCATGGAAGTGTTAACTTTATTCAAAACATTTCTTACTCTTGCAGATGATTATGTTAGAAGGGGCAAAAGCTACAACGGAGACTGTAGATGCTCTAAGAACAGGAGCATCTGCAATGAAGGCAATGCAGAAAGCAACGTATGCCTGCTTTACTTTCGCTCATTTGGTCATTGAATATTCTTAGTTCATTGTTGTTTTTTTTACTTTGCCGGATTATAAAAAAAAGCTTTACAACGTACCTGAACTTATTGATATTAGGCTACTTGTCTGAGGGAACAGCCTTCAAATAACAGCAGCTTTTGAAAAATGCTTGTGAAATTTTGTGTTTAAGTTTTATCGTGAAGTGTTAGACATGCACATCTTATATGGAGCTTTCTTGTTCAGGAATATTGATGATGTGGACAAGACGATGGATGAGATCAACGAGCAGACTGAGAATATGAAACAGATACAGGAAGCATTATCAGCTCCAATTGGTGCTGCAGCTGATTTCGATGAGGTTGTTAATCTTTGAACAGTATCTTGAGGTTTCTAAGCTTTTTATATATTATCTCATCTCATTAAGGATGGTTGTGGTGGTACTCAGGATGAATTGGAGGCAGAACTTGAAGATCTAGAAAGTGCGGAGTTGGAAGAGCAACTTCTGCAACCAGCATCAACAGCTCCTGCTGCACCTGTCTCAGTCCCGGCAGGCCGAGTTCCTGCACGCCCTGCTCCTCAAAACAGAACTGCTGAAGAAGACGAACTCGCTGCTCTACAAGCTGAGATGGCACTCTAA ATGTTTAACAGGCTTTTTGGTAAACCTAAACAAGAAGCCAATGCTTTGGCTACGTTAGAAAAGCTAAGCGAGACACTTGAAATGCTGGAGAAGAAAGAGAATGTTCTTGTGAAGAAGGCAGCTGCAGAGGTCGAAAGAGCTAAAGAATTCACAAGAGGGAAGAATAAACGAGCGGCTATACAATGTTTGAAGAGAAAGAGGCTTTATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAATTGCGCATCCATGATCAAATGATTATGTTAGAAGGGGCAAAAGCTACAACGGAGACTGTAGATGCTCTAAGAACAGGAGCATCTGCAATGAAGGCAATGCAGAAAGCAACGAATATTGATGATGTGGACAAGACGATGGATGAGATCAACGAGCAGACTGAGAATATGAAACAGATACAGGAAGCATTATCAGCTCCAATTGGTGCTGCAGCTGATTTCGATGAGGATGAATTGGAGGCAGAACTTGAAGATCTAGAAAGTGCGGAGTTGGAAGAGCAACTTCTGCAACCAGCATCAACAGCTCCTGCTGCACCTGTCTCAGTCCCGGCAGGCCGAGTTCCTGCACGCCCTGCTCCTCAAAACAGAACTGCTGAAGAAGACGAACTCGCTGCTCTACAAGCTGAGATGGCACTCTAA ATGTTTAACAGGCTTTTTGGTAAACCTAAACAAGAAGCCAATGCTTTGGCTACGTTAGAAAAGCTAAGCGAGACACTTGAAATGCTGGAGAAGAAAGAGAATGTTCTTGTGAAGAAGGCAGCTGCAGAGGTCGAAAGAGCTAAAGAATTCACAAGAGGGAAGAATAAACGAGCGGCTATACAATGTTTGAAGAGAAAGAGGCTTTATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAATTGCGCATCCATGATCAAATGATTATGTTAGAAGGGGCAAAAGCTACAACGGAGACTGTAGATGCTCTAAGAACAGGAGCATCTGCAATGAAGGCAATGCAGAAAGCAACGAATATTGATGATGTGGACAAGACGATGGATGAGATCAACGAGCAGACTGAGAATATGAAACAGATACAGGAAGCATTATCAGCTCCAATTGGTGCTGCAGCTGATTTCGATGAGGATGAATTGGAGGCAGAACTTGAAGATCTAGAAAGTGCGGAGTTGGAAGAGCAACTTCTGCAACCAGCATCAACAGCTCCTGCTGCACCTGTCTCAGTCCCGGCAGGCCGAGTTCCTGCACGCCCTGCTCCTCAAAACAGAACTGCTGAAGAAGACGAACTCGCTGCTCTACAAGCTGAGATGGCACTCTAA MFNRLFGKPKQEANALATLEKLSETLEMLEKKENVLVKKAAAEVERAKEFTRGKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPIGAAADFDEDELEAELEDLESAELEEQLLQPASTAPAAPVSVPAGRVPARPAPQNRTAEEDELAALQAEMAL* Homology
BLAST of Chy5G104700 vs. ExPASy Swiss-Prot
Match: Q9SZE4 (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS32.2 PE=1 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.4e-92 Identity = 188/219 (85.84%), Postives = 202/219 (92.24%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy Swiss-Prot
Match: O82197 (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS32.1 PE=1 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.7e-85 Identity = 181/217 (83.41%), Postives = 192/217 (88.48%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy Swiss-Prot
Match: Q7ZVC4 (Charged multivesicular body protein 4b OS=Danio rerio OX=7955 GN=chmp4b PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.5e-27 Identity = 87/217 (40.09%), Postives = 127/217 (58.53%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy Swiss-Prot
Match: Q6IQ73 (Charged multivesicular body protein 4c OS=Danio rerio OX=7955 GN=chmp4c PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25 Identity = 90/217 (41.47%), Postives = 121/217 (55.76%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy Swiss-Prot
Match: Q5XGW6 (Charged multivesicular body protein 4b OS=Xenopus laevis OX=8355 GN=chmp4b PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.3e-25 Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy TrEMBL
Match: A0A0A0LHT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000620 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy TrEMBL
Match: A0A1S3CAQ7 (vacuolar protein sorting-associated protein 32 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103498351 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy TrEMBL
Match: A0A5A7V4V7 (Vacuolar protein sorting-associated protein 32-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00800 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy TrEMBL
Match: A0A6J1G2S3 (vacuolar protein sorting-associated protein 32 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111450291 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 1.9e-100 Identity = 205/218 (94.04%), Postives = 212/218 (97.25%), Query Frame = 0
BLAST of Chy5G104700 vs. ExPASy TrEMBL
Match: A0A6J1FBK1 (vacuolar protein sorting-associated protein 32 homolog 2 OS=Cucurbita moschata OX=3662 GN=LOC111444128 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.2e-100 Identity = 205/218 (94.04%), Postives = 212/218 (97.25%), Query Frame = 0
BLAST of Chy5G104700 vs. NCBI nr
Match: XP_004141038.1 (vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >XP_011648616.1 vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >XP_031736822.1 vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >KGN60554.1 hypothetical protein Csa_019460 [Cucumis sativus]) HSP 1 Score: 389 bits (998), Expect = 1.99e-135 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Chy5G104700 vs. NCBI nr
Match: XP_008459153.1 (PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] >XP_008459161.1 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] >XP_008459166.1 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] >XP_038889616.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Benincasa hispida] >XP_038889617.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Benincasa hispida] >KAA0061506.1 vacuolar protein sorting-associated protein 32-like protein 2 [Cucumis melo var. makuwa] >TYK10767.1 vacuolar protein sorting-associated protein 32-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 387 bits (993), Expect = 1.15e-134 Identity = 216/218 (99.08%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Chy5G104700 vs. NCBI nr
Match: KAG7030473.1 (Vacuolar protein sorting-associated protein 32-like 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376 bits (966), Expect = 1.50e-130 Identity = 207/218 (94.95%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of Chy5G104700 vs. NCBI nr
Match: XP_023545615.1 (vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023545616.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023545619.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023545620.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023547008.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023547009.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023547010.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo] >XP_023547011.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375 bits (962), Expect = 6.10e-130 Identity = 207/218 (94.95%), Postives = 212/218 (97.25%), Query Frame = 0
BLAST of Chy5G104700 vs. NCBI nr
Match: XP_022946105.1 (vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita moschata] >XP_022946106.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita moschata] >XP_022946107.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita moschata] >XP_022946108.1 vacuolar protein sorting-associated protein 32 homolog 2-like [Cucurbita moschata]) HSP 1 Score: 374 bits (959), Expect = 1.75e-129 Identity = 205/218 (94.04%), Postives = 212/218 (97.25%), Query Frame = 0
BLAST of Chy5G104700 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein ) HSP 1 Score: 339.7 bits (870), Expect = 1.7e-93 Identity = 188/219 (85.84%), Postives = 202/219 (92.24%), Query Frame = 0
BLAST of Chy5G104700 vs. TAIR 10
Match: AT4G29160.3 (SNF7 family protein ) HSP 1 Score: 339.7 bits (870), Expect = 1.7e-93 Identity = 188/219 (85.84%), Postives = 202/219 (92.24%), Query Frame = 0
BLAST of Chy5G104700 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein ) HSP 1 Score: 315.8 bits (808), Expect = 2.6e-86 Identity = 181/217 (83.41%), Postives = 192/217 (88.48%), Query Frame = 0
BLAST of Chy5G104700 vs. TAIR 10
Match: AT4G29160.2 (SNF7 family protein ) HSP 1 Score: 295.8 bits (756), Expect = 2.8e-80 Identity = 165/192 (85.94%), Postives = 177/192 (92.19%), Query Frame = 0
BLAST of Chy5G104700 vs. TAIR 10
Match: AT5G09260.1 (vacuolar protein sorting-associated protein 20.2 ) HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09 Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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