Chy5G103060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G103060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Chitotriosidase-1-like
Location	chrH05: 16960679 .. 16962609 (+)
RNA-Seq Expression	Chy5G103060
Synteny	Chy5G103060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCGACTCTTCAAACCGTGCGACGTTCATTCGATCTTTAATTTCGAAAGCAAGGGAGAGTAATTTTGATGGTGTGAATCTTCAATGGTTGTACCCTTCTTCTATGGAGGAAATGGGCAATTTTGAAGCACTTATTCTTGAGTGTTATAATGATTTTTGTGAAAGAAGGTAAAGAATGTCATAAGCCAAGATTGATCCTTGTTGCAACAGTCTTTTACTTACCTTATATAGGGAAAGATGATGGTGTTATGTATCCAATTGAAACAATGAGAAGAACTTTGGATTGGGTTAATGTGATTGCTTATGATATTTTCACCCCTATTTCTTCAAGCAATGAAACTGGACCATCCTCAGCATTATTCAATAATCCAAGCAAGGCAACTTTGGGTGGATATTTTGGTATTGTTTTCTAGCTATCTTAACTTAAACTTTGTGTGTTTTTATTTTGGCATGAGTTTGATTTTGATTTTTGATTATAGTTTCTGTGATTGGGTTAAAACCACTTTGAAGGCATTGGTATTAATCTGCAATATGTTCAAGTATAGCTATAGGGCATGAGTTGGATTTGGTTAATATTATATCTCTTTAAATCGTGTGGTTTATGTTATAACCATATCTACTAATCTCTGTTATATCTAAAAGAAAGCAATATTAAATTTACGATTTGTGTCGATATTAATAAATTTATGCAGATTCTTTTATTCTTTTACGATTTCTGTTCATTATTATTTGTTGATTTCTTGACATTTAATAAAAAATTTAATTAGAGTTAATACACCTAATTTATGGTGTTTCAACGACATTTGAAAGTGCTTAAAAAGGATTTAATTGTTTAGATGATCCATTTTAAAGGTTTAAAATGGCAAATGACTTAGTTTTTTTTTTCTAATTGTGAAATGTGATTGTTGTTGATGTCATGTTTGCATGAAATTACAACATTTCTCTCTTCTTCTTTCTCGCTCGTTTTTCTCCCTCTATGTTTTATTCTCTGGCACGGTGAGTCCGTATGTGAGCAACTCTGTTGCACGACCAGCTCTTGTGAAGATAGAGCGGTGAAAAGAGAGGGAGAGCTAGTGAGAGAGTGAGAGACAGAGTGGAAAGAAAGACAATGAGAGATTGAGAGACAGCGAGAGTGAGAAAGTAAGAGAACGAAAGAAAAGAGAGCAACACTAAGAAATGGAAAAGACTAGTGAAACGAACAATACTGAGTTTGAGAGAGCGACACAAATTTTGAGTGAAAGCGAGACTGCTTTTTCACGTGCATATAAGTGTATATTTTGGTAATAATTTCACTCTCTTTTTTTTTTTTGTCAACAAAAGGATATTTGACAATTTAAAAAAAAAGTTTTACCCACAAACTCCTTAACAAAACCTCATTCACTTTTTTTTATGAACCTGTCTGATACGGGATTACTCTCTCTTGTGTGTTTATACATACATTTTTACATACTAATCATTATATTTTACATGTGTTGGACCCTTATAGGTATAAGAACATGGATTGAGAAAGGTATGCCTACCAAAAGGATGATATTTGGACTTCCTTTCCATGGATGAGCATGAAAACTTGAGAGATCTTACAATCACAATGTGTTTTCACCTGCCCAAGGACCAGCTCAAGGACAAAATATATCCATGGAAGGTCTCATAGAGTATAGGAATGTTAAAAAATTTATAGCCGATAACGATAATGCCACTAATGTTCCCATTGACCACAAATATCCAATCGCCTACACCCATTGTGATAATACTTGGATTGCCTATGAAATTGAAGAAACCATAACAGCCAAGATTGCAAAAGCTAAAATCAACTTGGCAATGCTTGGTTACTTTGCTTCAAACATTGCAGCTGATGATGATCATCATTCTCTAGCTAAATCAGCATTGAGGGAATGGAGAAAAGCATACAGCTACTATTGGTGGTAA

mRNA sequence

ATGGCTAGCGACTCTTCAAACCGTGCGACGTTCATTCGATCTTTAATTTCGAAAGCAAGGGAGAGTAATTTTGATGGTGTGAATCTTCAATGGTTGTACCCTTCTTCTATGGAGGAAATGGGCAATTTTGAAGCACTTATTCTTGAGTGTTATAATGATTTTTGTGAAAGAAGCAATGAAACTGGACCATCCTCAGCATTATTCAATAATCCAAGCAAGGCAACTTTGGGTGGATATTTTGGACCAGCTCAAGGACAAAATATATCCATGGAAGGTCTCATAGAGTATAGGAATGTTAAAAAATTTATAGCCGATAACGATAATGCCACTAATGTTCCCATTGACCACAAATATCCAATCGCCTACACCCATTGTGATAATACTTGGATTGCCTATGAAATTGAAGAAACCATAACAGCCAAGATTGCAAAAGCTAAAATCAACTTGGCAATGCTTGGTTACTTTGCTTCAAACATTGCAGCTGATGATGATCATCATTCTCTAGCTAAATCAGCATTGAGGGAATGGAGAAAAGCATACAGCTACTATTGGTGGTAA

Coding sequence (CDS)

ATGGCTAGCGACTCTTCAAACCGTGCGACGTTCATTCGATCTTTAATTTCGAAAGCAAGGGAGAGTAATTTTGATGGTGTGAATCTTCAATGGTTGTACCCTTCTTCTATGGAGGAAATGGGCAATTTTGAAGCACTTATTCTTGAGTGTTATAATGATTTTTGTGAAAGAAGCAATGAAACTGGACCATCCTCAGCATTATTCAATAATCCAAGCAAGGCAACTTTGGGTGGATATTTTGGACCAGCTCAAGGACAAAATATATCCATGGAAGGTCTCATAGAGTATAGGAATGTTAAAAAATTTATAGCCGATAACGATAATGCCACTAATGTTCCCATTGACCACAAATATCCAATCGCCTACACCCATTGTGATAATACTTGGATTGCCTATGAAATTGAAGAAACCATAACAGCCAAGATTGCAAAAGCTAAAATCAACTTGGCAATGCTTGGTTACTTTGCTTCAAACATTGCAGCTGATGATGATCATCATTCTCTAGCTAAATCAGCATTGAGGGAATGGAGAAAAGCATACAGCTACTATTGGTGGTAA

Protein sequence

MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERSNETGPSSALFNNPSKATLGGYFGPAQGQNISMEGLIEYRNVKKFIADNDNATNVPIDHKYPIAYTHCDNTWIAYEIEETITAKIAKAKINLAMLGYFASNIAADDDHHSLAKSALREWRKAYSYYWW*

Homology

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BLAST of Chy5G103060 vs. ExPASy Swiss-Prot
Match: O81862 (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 73/262 (27.86%), Postives = 102/262 (38.93%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYN-------- 60
           MAS+ ++R +FI S I  AR   F G++L W YPSS  EM NF  L+ E  +        
Sbjct: 109 MASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASS 168

Query: 61  ----------------------------------------DFCER--SNETGPSSALFN- 120
                                                   DF     S  TGP +ALF+ 
Sbjct: 169 SGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDP 228

Query: 121 ---NPS----------------KATLG----------------GYFGPAQGQNISMEGLI 177
               PS                KA LG                 Y+ P  G  IS +G I
Sbjct: 229 SNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSI 288

[Close]

BLAST of Chy5G103060 vs. ExPASy Swiss-Prot
Match: A0A1B1J8Z2 (Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 60/265 (22.64%), Postives = 100/265 (37.74%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGN--------FEALILE--- 60
           MAS   NRA+FI S I  AR+  F+G++L W +P   ++M N        ++AL++E   
Sbjct: 135 MASSKQNRASFINSTIHVARKHEFNGLDLDWEWPGDEKDMSNLALLLKEWYKALVVEANT 194

Query: 61  -------------------------------------------CYNDFCERSNETGPSSA 120
                                                      C++     +NETG ++A
Sbjct: 195 SRKSRLLLTSAVYFNSTISLIGNGPRSYPVRAIRKYLDWASPMCFDYNGAWANETGFNAA 254

Query: 121 LF----NNPSKATLGGYFG---PAQ----------------------------GQNISME 177
           L+    N  +K  +G + G   PA+                            G  +  +
Sbjct: 255 LYDPNSNISTKYGIGSWIGSGVPAEKLVMGLPLYGRAWELKDPNDHGVGAKAVGPAVDTD 314

[Close]

BLAST of Chy5G103060 vs. ExPASy Swiss-Prot
Match: A0A072VEP0 (Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.9e-06
Identity = 62/266 (23.31%), Postives = 90/266 (33.83%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYND-FCER-- 60
           +AS   NR  FI S I  AR+  FDGV+L W +P + ++M N   L  E YN  F E   
Sbjct: 121 IASTKQNREIFINSTIEVARKYRFDGVDLDWEFPETQQDMFNLGLLYEEWYNALFAEAKV 180

Query: 61  ----------------------------------------------------SNETGPSS 120
                                                                N T  ++
Sbjct: 181 RRKPRLLLTSAVYYNSTVRLIGKHGPRSYPTQAINKYLDWASPMCFDYHGTWDNNTDFNA 240

Query: 121 ALFNN-------------------PSKATLG----------------GYFGPAQGQNISM 177
           AL+++                   P K  +G                G    A G     
Sbjct: 241 ALYDSKSEISTNFGLHSWIKSGVRPEKLVMGLALYGRAWELKDPNVNGVGAEAVGPATDT 300

[Close]

BLAST of Chy5G103060 vs. ExPASy Swiss-Prot
Match: Q11174 (Probable endochitinase OS=Caenorhabditis elegans OX=6239 GN=cht-1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.7e-04
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILE 50
           MA+ S++R  FI S I+  R   FDG+++ W YPS   +M N+ AL+ E
Sbjct: 148 MAASSASRKVFIDSAITFVRTWGFDGIDIDWEYPSGATDMANYVALVKE 196

[Close]

BLAST of Chy5G103060 vs. ExPASy Swiss-Prot
Match: Q91Z98 (Chitinase-like protein 4 OS=Mus musculus OX=10090 GN=Chil4 PE=1 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 7.9e-04
Identity = 26/62 (41.94%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSM----EEMGNFEALILECYNDFCE 59
           M S   NR TFI+S+I   R+ NFDG+NL W YP S     ++   F  L+ E    F E
Sbjct: 109 MVSTPQNRQTFIKSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVQEMRKAFEE 168

[Close]

BLAST of Chy5G103060 vs. ExPASy TrEMBL
Match: A0A0A0LL51 (Glyco_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G008760 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 169/280 (60.36%), Postives = 175/280 (62.50%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDF------ 60
           MA DSSNRATFIRSLISKARESNFDGV+LQWLYPSS EEM NFEALILECYNDF      
Sbjct: 95  MARDSSNRATFIRSLISKARESNFDGVDLQWLYPSSREEMANFEALILECYNDFVKEGKE 154

Query: 61  CER------------------------------------------------SNETGPSSA 120
           C +                                                SNETGPSSA
Sbjct: 155 CHKPRLILVATVFYLPYIGKDDGVMYPIETMRRTLDWVNVIAYDIFTPISSSNETGPSSA 214

Query: 121 LFNNPSKATLGGYF-----------------------------------------GPAQG 180
           LFNNPSKATLGGYF                                         GPAQG
Sbjct: 215 LFNNPSKATLGGYFGIRTWIEKGMPTKRMIFGLPFHGWAWKLERSYNHNVFSPAQGPAQG 274

Query: 181 QNISMEGLIEYRNVKKFIADNDNATNVPIDHKYPIAYTHCDNTWIAYEIEETITAKIAKA 186
           QNISMEGLIEYRNVKKFI DN+N TNV IDHKYPIAYTHCDNTWIAYE EETITAKIAKA
Sbjct: 275 QNISMEGLIEYRNVKKFIVDNNNVTNVLIDHKYPIAYTHCDNTWIAYESEETITAKIAKA 334

[Close]

BLAST of Chy5G103060 vs. ExPASy TrEMBL
Match: A0A6J1KJH1 (chitinase-3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111493752 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.1e-46
Identity = 117/274 (42.70%), Postives = 142/274 (51.82%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERS-- 60
           MA+ SSNRA+FI S I KARE NFDGV++QW+YPS +E+M NFEALI+EC+N   + +  
Sbjct: 90  MAASSSNRASFIGSFICKAREGNFDGVDVQWVYPSCVEDMSNFEALIIECHNGVVKEAKE 149

Query: 61  -------------------------------------------------NETGPSSALFN 120
                                                            NETGPSSA F 
Sbjct: 150 SRHPRLILVATVFYSPYIHDVRYPIQVIRRALDWVNVIAFDIYTPTSSPNETGPSSA-FY 209

Query: 121 NPSKATLGGYF-----------------------------------------GPAQGQNI 180
           NP + +  GYF                                         GPA GQNI
Sbjct: 210 NPERNSSSGYFGIRTWIQQGLPSKMMVFGLPFHGWAWKLESSKKHNVFSPAQGPAGGQNI 269

Query: 181 SMEGLIEYRNVKKFIADNDNATNVPIDHKYPIAYTHCDNTWIAYEIEETITAKIAKAKIN 183
           SMEGLIEYRN+KKFIADND A NVP+D  + I YT+  +TWIAYE E+TI  KI++ K N
Sbjct: 270 SMEGLIEYRNIKKFIADND-ANNVPMDRSFVIGYTNFGSTWIAYEDEDTIKFKISRVKTN 329

[Close]

BLAST of Chy5G103060 vs. ExPASy TrEMBL
Match: A0A5A7V626 (Chitotriosidase-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00830 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.3e-45
Identity = 90/106 (84.91%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 81  GPAQGQNISMEGLIEYRNVKKFIAD-NDNATNVPIDHKYPIAYTHCDNTWIAYEIEETIT 140
           GPAQGQNISMEGLIEYRN+KKFI D N+NATNV IDHKYPIAYTHCDNTWIAYE EE+IT
Sbjct: 33  GPAQGQNISMEGLIEYRNIKKFIVDNNNNATNVLIDHKYPIAYTHCDNTWIAYESEESIT 92

Query: 141 AKIAKAKINLAMLGYFASNIAADDDHHSLAKSALREWRKAYSYYWW 186
           AKIAK KINLAMLGYF SNIAA DDH SL+K+A REWRK+Y YYWW
Sbjct: 93  AKIAKVKINLAMLGYFVSNIAAHDDHDSLSKAASREWRKSYGYYWW 138

[Close]

BLAST of Chy5G103060 vs. ExPASy TrEMBL
Match: A0A1S4DZW4 (uncharacterized protein LOC107991275 OS=Cucumis melo OX=3656 GN=LOC107991275 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43
Identity = 89/106 (83.96%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 81  GPAQGQNISMEGLIEYRNVKKFIAD-NDNATNVPIDHKYPIAYTHCDNTWIAYEIEETIT 140
           GPAQGQNISMEGLIEYRN+KKFI D N+NATNV IDHKYPIAYTHCDNTWIAYE EE+IT
Sbjct: 28  GPAQGQNISMEGLIEYRNIKKFIVDNNNNATNVLIDHKYPIAYTHCDNTWIAYESEESIT 87

Query: 141 AKIAKAKINLAMLGYFASNIAADDDHHSLAKSALREWRKAYSYYWW 186
           AKIAK KINLAMLGYF SNIAA DDH SL+K+A RE RK+Y YYWW
Sbjct: 88  AKIAKVKINLAMLGYFVSNIAAHDDHDSLSKAASRERRKSYGYYWW 133

[Close]

BLAST of Chy5G103060 vs. ExPASy TrEMBL
Match: A0A6J1CQ34 (chitotriosidase-1-like OS=Momordica charantia OX=3673 GN=LOC111013117 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 9.0e-43
Identity = 114/269 (42.38%), Postives = 140/269 (52.04%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCER--- 60
           MA+ SS+RA FIRS ISKARE NFDG++LQWLYPSS+E+M NFEALI+EC+         
Sbjct: 90  MAAHSSHRAAFIRSSISKAREGNFDGLDLQWLYPSSVEDMANFEALIIECHRAIIRESRE 149

Query: 61  ------------------------------------------------SNETGPSSALFN 120
                                                           SNE GPSSA FN
Sbjct: 150 SKEPRLIFVATVFYSPRLENLTYPIQAIRRTLDWVNVIAYDIFTPILSSNEVGPSSAFFN 209

Query: 121 NPSKATLGGY----------------------------------------FGPAQGQNIS 179
              +++ G +                                         G AQGQ+IS
Sbjct: 210 PRRRSSSGDFGIRTWIRLGLPSKMMVFGVPFHGWAWKLNCSGNPRVFAPAQGAAQGQDIS 269

[Close]

BLAST of Chy5G103060 vs. NCBI nr
Match: XP_004139401.1 (class V chitinase [Cucumis sativus] >KGN60736.1 hypothetical protein Csa_019448 [Cucumis sativus])

HSP 1 Score: 302 bits (774), Expect = 1.26e-99
Identity = 169/280 (60.36%), Postives = 175/280 (62.50%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDF------ 60
           MA DSSNRATFIRSLISKARESNFDGV+LQWLYPSS EEM NFEALILECYNDF      
Sbjct: 95  MARDSSNRATFIRSLISKARESNFDGVDLQWLYPSSREEMANFEALILECYNDFVKEGKE 154

Query: 61  CER------------------------------------------------SNETGPSSA 120
           C +                                                SNETGPSSA
Sbjct: 155 CHKPRLILVATVFYLPYIGKDDGVMYPIETMRRTLDWVNVIAYDIFTPISSSNETGPSSA 214

Query: 121 LFNNPSKATLGGYFG-----------------------------------------PAQG 180
           LFNNPSKATLGGYFG                                         PAQG
Sbjct: 215 LFNNPSKATLGGYFGIRTWIEKGMPTKRMIFGLPFHGWAWKLERSYNHNVFSPAQGPAQG 274

Query: 181 QNISMEGLIEYRNVKKFIADNDNATNVPIDHKYPIAYTHCDNTWIAYEIEETITAKIAKA 185
           QNISMEGLIEYRNVKKFI DN+N TNV IDHKYPIAYTHCDNTWIAYE EETITAKIAKA
Sbjct: 275 QNISMEGLIEYRNVKKFIVDNNNVTNVLIDHKYPIAYTHCDNTWIAYESEETITAKIAKA 334

[Close]

BLAST of Chy5G103060 vs. NCBI nr
Match: KAA0063543.1 (chitotriosidase-1-like [Cucumis melo var. makuwa] >TYJ97870.1 chitotriosidase-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (480), Expect = 2.66e-58
Identity = 90/106 (84.91%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 81  GPAQGQNISMEGLIEYRNVKKFIADNDN-ATNVPIDHKYPIAYTHCDNTWIAYEIEETIT 140
           GPAQGQNISMEGLIEYRN+KKFI DN+N ATNV IDHKYPIAYTHCDNTWIAYE EE+IT
Sbjct: 33  GPAQGQNISMEGLIEYRNIKKFIVDNNNNATNVLIDHKYPIAYTHCDNTWIAYESEESIT 92

Query: 141 AKIAKAKINLAMLGYFASNIAADDDHHSLAKSALREWRKAYSYYWW 185
           AKIAK KINLAMLGYF SNIAA DDH SL+K+A REWRK+Y YYWW
Sbjct: 93  AKIAKVKINLAMLGYFVSNIAAHDDHDSLSKAASREWRKSYGYYWW 138

[Close]

BLAST of Chy5G103060 vs. NCBI nr
Match: XP_022999353.1 (chitinase-3-like protein 2 [Cucurbita maxima])

HSP 1 Score: 191 bits (486), Expect = 2.89e-56
Identity = 116/270 (42.96%), Postives = 141/270 (52.22%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERS-- 60
           MA+ SSNRA+FI S I KARE NFDGV++QW+YPS +E+M NFEALI+EC+N   + +  
Sbjct: 90  MAASSSNRASFIGSFICKAREGNFDGVDVQWVYPSCVEDMSNFEALIIECHNGVVKEAKE 149

Query: 61  -------------------------------------------------NETGPSSALFN 120
                                                            NETGPSSA +N
Sbjct: 150 SRHPRLILVATVFYSPYIHDVRYPIQVIRRALDWVNVIAFDIYTPTSSPNETGPSSAFYN 209

Query: 121 NPSKATLGGYFG-----------------------------------------PAQGQNI 178
            P + +  GYFG                                         PA GQNI
Sbjct: 210 -PERNSSSGYFGIRTWIQQGLPSKMMVFGLPFHGWAWKLESSKKHNVFSPAQGPAGGQNI 269

[Close]

BLAST of Chy5G103060 vs. NCBI nr
Match: XP_023545460.1 (chitinase-3-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (486), Expect = 2.89e-56
Identity = 117/270 (43.33%), Postives = 142/270 (52.59%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERS-- 60
           MA+ SSNRA+FI S I KARE NFDGV++QW+YPS +E+M NFEALI+EC N   + +  
Sbjct: 90  MAATSSNRASFIGSFICKAREGNFDGVDVQWVYPSCVEDMSNFEALIIECRNGVVKEAKE 149

Query: 61  -------------------------------------------------NETGPSSALFN 120
                                                            NETGPSSA +N
Sbjct: 150 SRQPRLILVATLFYSPYINDVRYPIQVIRRTLDWVNVIAYDIYTPTSSTNETGPSSAFYN 209

Query: 121 NPSKATLGGYFG-----------------------------------------PAQGQNI 178
            P+K +  GYFG                                         PA+GQNI
Sbjct: 210 -PNKNSSSGYFGIRTWIQQGLPSKMMVFGLPFHGWAWELESSKKHKVFSPAQGPARGQNI 269

[Close]

BLAST of Chy5G103060 vs. NCBI nr
Match: XP_016901518.1 (PREDICTED: uncharacterized protein LOC107991275 [Cucumis melo])

HSP 1 Score: 184 bits (466), Expect = 3.04e-56
Identity = 89/106 (83.96%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 81  GPAQGQNISMEGLIEYRNVKKFIADNDN-ATNVPIDHKYPIAYTHCDNTWIAYEIEETIT 140
           GPAQGQNISMEGLIEYRN+KKFI DN+N ATNV IDHKYPIAYTHCDNTWIAYE EE+IT
Sbjct: 28  GPAQGQNISMEGLIEYRNIKKFIVDNNNNATNVLIDHKYPIAYTHCDNTWIAYESEESIT 87

Query: 141 AKIAKAKINLAMLGYFASNIAADDDHHSLAKSALREWRKAYSYYWW 185
           AKIAK KINLAMLGYF SNIAA DDH SL+K+A RE RK+Y YYWW
Sbjct: 88  AKIAKVKINLAMLGYFVSNIAAHDDHDSLSKAASRERRKSYGYYWW 133

[Close]

BLAST of Chy5G103060 vs. TAIR 10
Match: AT4G19810.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 73/262 (27.86%), Postives = 102/262 (38.93%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYN-------- 60
           MAS+ ++R +FI S I  AR   F G++L W YPSS  EM NF  L+ E  +        
Sbjct: 109 MASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASS 168

Query: 61  ----------------------------------------DFCER--SNETGPSSALFN- 120
                                                   DF     S  TGP +ALF+ 
Sbjct: 169 SGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDP 228

Query: 121 ---NPS----------------KATLG----------------GYFGPAQGQNISMEGLI 177
               PS                KA LG                 Y+ P  G  IS +G I
Sbjct: 229 SNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSI 288

[Close]

BLAST of Chy5G103060 vs. TAIR 10
Match: AT4G19760.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 69/251 (27.49%), Postives = 94/251 (37.45%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERSNE 60
           MAS+S NR  FI S I  AR+ +F G++L W YPS+  EM NF  L+ E      E S++
Sbjct: 105 MASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMTNFGKLLEEWRAAVVEESDK 164

Query: 61  --------------------------------------------------TGPSSALFNN 120
                                                             TGP +ALF++
Sbjct: 165 TNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGPGWSPVTGPPAALFHD 224

Query: 121 PS-----------------------KATLG----------------GYFGPAQGQNISME 163
           PS                       KA LG                GY     G  IS +
Sbjct: 225 PSNPAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLEDAENNGYDAATDGAAISPD 284

[Close]

BLAST of Chy5G103060 vs. TAIR 10
Match: AT4G19750.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 68.6 bits (166), Expect = 6.2e-12
Identity = 68/249 (27.31%), Postives = 94/249 (37.75%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERSNE 60
           MAS+S NR  FI S I  AR+ +F G++L W YPS+  EM NF  L+ E      E S+ 
Sbjct: 97  MASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYPSNDVEMANFGKLVKEWRAAVVEESDR 156

Query: 61  --------------------------------------------------TGPSSALF-- 120
                                                             TGP +ALF  
Sbjct: 157 TNQLPLLLTAAVYYSPDYYGEEYPVQAIADNLDFVNIMAYDFYGPGWSPVTGPPAALFDP 216

Query: 121 NNPS-------------------KATLG----------------GYFGPAQGQNISMEGL 163
           +NP+                   KA LG                GY     G  IS +G 
Sbjct: 217 SNPAGRSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLEDAENNGYDAATDGAAISSDGS 276

[Close]

BLAST of Chy5G103060 vs. TAIR 10
Match: AT4G19770.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 66.2 bits (160), Expect = 3.1e-11
Identity = 69/248 (27.82%), Postives = 94/248 (37.90%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALI------------- 60
           MAS S  R +FI S IS AR   FDG++L W YP +  EM +F  L+             
Sbjct: 1   MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRNAAEMSDFAELLKEWRYAVQGEAYS 60

Query: 61  ------------------------------------LECYNDFCERSNE-TGPSSALF-- 120
                                               ++ Y+ +     E TGP +AL+  
Sbjct: 61  SELPVLILTATVYYSSNYNGVVYPVKFISELLDWVNIKAYDFYGPGCTEVTGPPAALYLQ 120

Query: 121 -NNPS----------------KATLG----------------GYFGPAQGQNISMEGLIE 164
            + PS                KA LG                GY+    G  IS +G I 
Sbjct: 121 SDGPSGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLADPKNHGYYVDTTGPAISDDGEIS 180

[Close]

BLAST of Chy5G103060 vs. TAIR 10
Match: AT4G19800.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 62.0 bits (149), Expect = 5.8e-10
Identity = 65/249 (26.10%), Postives = 93/249 (37.35%), Query Frame = 0


Query: 1   MASDSSNRATFIRSLISKARESNFDGVNLQWLYPSSMEEMGNFEALILECYNDFCERSNE 60
           MAS+  +RA+FI+S I+ AR   F G++L W YP + EEM +F  L+ E  +     SN 
Sbjct: 88  MASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNEEEMYDFGKLLEEWRSAVEAESNS 147

Query: 61  --------------------------------------------------TGPSSALF-- 120
                                                             TGP ++L+  
Sbjct: 148 SGTTALILTAAVYYSSNYQGVPYPVLAISNSLDWINLMAYDFYGPGWSTVTGPPASLYLP 207

Query: 121 -----------------NNPSKATLG----------------GYFGPAQGQNISMEGLIE 165
                                KA LG                GY     G  IS +G I 
Sbjct: 208 TDGRSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTLADPDVNGYDANTTGPAISDDGEIS 267

The following BLAST results are available for this feature:

BLAST of Chy5G103060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81862	1.8e-11	27.86	Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1	[more]
A0A1B1J8Z2	1.0e-06	22.64	Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2	[more]
A0A072VEP0	2.9e-06	23.31	Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1	[more]
Q11174	4.7e-04	42.86	Probable endochitinase OS=Caenorhabditis elegans OX=6239 GN=cht-1 PE=1 SV=1	[more]
Q91Z98	7.9e-04	41.94	Chitinase-like protein 4 OS=Mus musculus OX=10090 GN=Chil4 PE=1 SV=2	[more]

BLAST of Chy5G103060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL51	1.6e-79	60.36	Glyco_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G008760 PE...	[more]
A0A6J1KJH1	5.1e-46	42.70	chitinase-3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111493752 PE=4 SV=1	[more]
A0A5A7V626	4.3e-45	84.91	Chitotriosidase-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S4DZW4	1.8e-43	83.96	uncharacterized protein LOC107991275 OS=Cucumis melo OX=3656 GN=LOC107991275 PE=...	[more]
A0A6J1CQ34	9.0e-43	42.38	chitotriosidase-1-like OS=Momordica charantia OX=3673 GN=LOC111013117 PE=4 SV=1	[more]

BLAST of Chy5G103060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139401.1	1.26e-99	60.36	class V chitinase [Cucumis sativus] >KGN60736.1 hypothetical protein Csa_019448 ...	[more]
KAA0063543.1	2.66e-58	84.91	chitotriosidase-1-like [Cucumis melo var. makuwa] >TYJ97870.1 chitotriosidase-1-...	[more]
XP_022999353.1	2.89e-56	42.96	chitinase-3-like protein 2 [Cucurbita maxima]	[more]
XP_023545460.1	2.89e-56	43.33	chitinase-3-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_016901518.1	3.04e-56	83.96	PREDICTED: uncharacterized protein LOC107991275 [Cucumis melo]	[more]

BLAST of Chy5G103060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19810.1	1.3e-12	27.86	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19760.1	1.6e-12	27.49	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19750.1	6.2e-12	27.31	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19770.1	3.1e-11	27.82	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19800.1	5.8e-10	26.10	Glycosyl hydrolase family protein with chitinase insertion domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 1..54 e-value: 1.7E-7 score: 31.3
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 1..179 score: 16.480198
IPR029070	Chitinase insertion domain superfamily	GENE3D	3.10.50.10		coord: 64..132 e-value: 9.1E-5 score: 25.1
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..57 e-value: 1.5E-9 score: 39.5
None	No IPR available	PANTHER	PTHR11177:SF351	CHITINASE-LIKE PROTEIN-RELATED	coord: 75..172 coord: 1..61
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 75..172 coord: 1..61
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G103060.1	Chy5G103060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0016787	hydrolase activity