Chy4G090410 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G090410
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	KH domain-containing protein
Location	chrH04: 27624546 .. 27629448 (-)
RNA-Seq Expression	Chy4G090410
Synteny	Chy4G090410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCTCAGATTAGAACCAGCGGTGATGCTGACAGGTATCCATCCCAGATTCATTCTTTCATTCTACTCACTACTCCCAACATCCCATCAATTTTTCTTCCCACCTTCTCCCTATCCCCCTGGTGATTATCTTCTTCTGATCTTCTTTAGCCAGTACCTGTCGGAGCTGTTGGCCGAGCATCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTTTTAAATCAAGGTCTACTTTTCTTTTTCTTTTCTCTTTTACAACTCCACTCTCTCTCACCGCAACTATACTTTCCTATATTTAGATCGCACCATCCAATCTATGCCTGCTGCTTCCTCCTTATAACTTCTTACCGCACCTCTTTTGTTGTTTCTTTTTTCAATTTCTTTACGCATGTATATATCATCATGCTTTTTCCATCTCCAATTTTCCTCCCTTAAGAGTTGGTTCTCCATGAGAACCAGATTGTTGCTGTCTCTAAAATCGTCTGCCTTTTTTTAAATCTACTAACTGCTTACATATATCTAATCGGAGATTTATAGTTCTAAGTCGATTGCAAGGTCTATTTTAACCACATTGCCCATAACTTACATCTCCACCACGCATCAGCAACGCTCTGCTTTATAATCTCAAACTCAAAATGCTTCTTATTAATATTTCAAGATTCACCTTCAATTTATATTTGGTATTTCATTTATTAATTGAAAAAGTTGAAATATTCTTTTACCAATTACTCTGCTTTAGTTGTTACCGAGTCTTCAGGTAGACTTCGAATACTGTAACAGCTTTAAAAGTCGTGTCAGGTTTTGCATTTCATCTGTTGTTACTTGTTAGTTGCTTTAAACCAAACTTTTTTTTCCTTAAAGCATTTATGCAACTGAGTGTTATTTACTCTAATTCGCCCTTTTTCAAAATGTTATGGCTTTAACCATGCTCTCGAGCAGAAAAAGTTACGGCATTAAATTTAACTACAATCTAGATCAGTTAAAGAGTGCTAATCGAGAAATAGTGAGGGAATTATTAAGAATGTAGTTATGTGAGTTGTTTACAAGTTCATGGAGTGACTTCAGGGTCTGTAGGCCGAATTTTGGGTAGTAGTTTCGTGAGAGAGTGATATCCTCTTGAAATGCTATATAACCAATGTAACTTTCTTCTATATTATAAAATAAATTCATTCTTATTACCTTATTTTCAATCTTAAGTTGATTGGGTTCCTATCCATCTCCTCCCAAGAAACTTTCACATCTTTAAAAAAAAATTCTCTTCCTCCTCGATCAATTTTCCAATTAGTGATCAAGACACTTGCTTGCCACAAAATGTTCTCTCTTTCAGAAGGATCTCCTCTAACACCGATTCATTAAGCCATCCCAGGAGCCATTGTATGCATCTCATTTAATTTTTTCACTATCACACTCAATCACATTATTTCCTTAAAATACTATTTAATAGTTATTTTCTAACCAAGGAATAAGGAAAAAAAAAAAAAAAGACAAACTTTTTATGGAAGTCTACTTACCCGTACAATCCCTATTACATATGATAAGATAAGGCATAAATATTAATGAAATACGAGGCATGTTGTGCTGACCAGAGCTTCAGACCTCTGAAGCATTCAGTTATCTTACATAGAAATCTAACTAAATATTCAGAAGCCTATCTAGACAGTAATACATATCAAGTCTTTTCTCAATCGATGGAGAAGTAACCTGGTATGATATGTTTGACTCTGCTAATCCACGTTTTTTACTTTTTCACATTCTAAACTTCGGAAATCTGGGTTTGTTTTACATATGATAAGTACCTTTATGCAGGTTTTTGGAATGATGTCCGACCAAAGGTTATAGTGATTTTACATATGACAAGTTACTTTATGTGCACAGAGATTTTGCGGGTTTCCGGAATGATGTCCAACCAAGGTTTTAGTGAATTTGAGAGATTACGACATAGAAGCCCCAGTCCAATGGCTTCTTCTAACCTTGTGTCAAATATTTCTGGCACAGGTTTTGGCAGCTGGAATGGACTTCCTCAGGAAGTAAGTTGTTTAGTCTGTTTCTCTGGATTTCTCAATTGTGAATTTGTTAGACTTATTTGAACAGATCATCAATCGCAAGATTCTAGTGCTTCGTGTTTGCTTTTTATTTGGTTGAAACTTTTCTAACTTAGAAATTACATGCCAGCTATAATGCTCAATAGCTTTTGACGTTTTAGAGTTATAATAACATACTGTCCTTAACTTATTAAGTGCTGGCTAAGAAAATTTCAATTTCTGGGAACTTCCTACAATTATATGATCCTTAGCTTCCTTTTTCTTCTTCCCTCACGGAAGTGGCTGTAACTTAGTATACATAGGAGTGAATTTGTGTGTGAATCTGTCTAGCTAGATTGGCAGAATTTGCTTCTATGTTCTTTAGTCTAATCCTCTCTAGGCTGCATATTGAACAACCTAGGATTTGGCAGTTTACTATGCAGAGTAGTTCAGCATAATTGCTTTGGGGATTATGCACAAGTTGCCGAAACAAAACTTTAATAATTATTAGAAAACTATTTACAAGCTTTTGTTTTCAATGGAAGAAAAATTGTTATTCTCCTAAATAGGGCATACCGCACTCACTAGAACAAGCTATAGGAAAGGAGAAAAAGAAAACCATCTTTAAAAAACAGTTAAATAAATATGTTTTCACTGAACTTATGTTTTTGATAAAAAAGCAAAAAACAATTTCTAAAATACAAACAGTTCCTCTGTTCCATCTTGCTTGTTTCACATTCCTGATCCCCTACATATTAATCATGGGCCTGGTTGGATAGCATCTTAAGTGATCAAACTCACAAGTTGTTTAGGAAGTATATCTTATAATTTCTGGACCTAGGATTGAATTAAAAAAGGGTTTTGGGACTGGGAGCTAAAAGGGGTATCTATACATAGCATTCTTGTTTTACTTTCAAGGAAGTATGAAAGCTTTAAGTATTTGCCCACTTTGATTGGATTCAATAAACTATTCGCTTCCTATGTATGTATAAAATCCATAAGTTGTACTATAATCCTGCTAACATTCTGCCACTACGTTTTCTTGAATGAGTCATCAGTTATTGATAATGGTGCAAATATTCTAGACAGTTTCCCGGGTTGTTTAATTTTTGAAGTTAAACACCAAAGTTCTCATTGCTCACAAACATGAAAGAAAAGTATTCCGGCATAATAAACCAATCCGTAGAATCACTGCAAAATACCACAGGTTTCACAGTTATGTGGAGTTGGGGAACTTATATCATTTTAATTCTTTAATTCCATATTTTGATGCAGTATGCTTATTATTTCTCTCCATAATCAGAAAAGTTGTTTGAACTTGATATGAAATTGTTATCTTGGGATCGTGGGAAGGTAATAGAAACTCCCACCATGTCTGTAACATTTACCTTGACTTGTAAGCGTTCCAGAAGTTTTCCTTTTGTTATATAGGATGCCTACAACCCAAATTTTTTAAACTTTTATGTCTTAGACAGACTTATTATTTTTAAAACATAGAAGAAGAAACAATCAATATGACCACCGATGTTACTTTCGTTTTTTCCTTTTCACAGCCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCGAATGTAATTCAATAAAGAAGTGTCTCTGTATGTGGTTTCTAAAATCCTTTCAGAATGCAGATTTTTTTTAACTTTAATTTGTCTTGTTTCTTGGATGGCAGTTCAATTTTGTGGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAACGGGTAGAAGCTACTACAGGATGTCGTGTGTATATCAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGTATTTTAGGTGAAATTGCTTGGATGAAACACTTGAATAAATCGCTGACTCTAAGTGATCACTTAATTTTTTTTCCATTGGGTGTTTCTTATTGTGTTTGATAGTCATAGCAGTATCTGCTTATGTTTAATAATGAGCTATCTGGTTATTATTTCTTTATCTATGACTGTTTTAAACTCTCAAGGAAGAGAAGCTCCGAGGAAGACTTGGTTATGAACATCTGAACGAACCACTGCATGTCCTAATTGAGGCTGATTTACCAGCCAATATCATTGATATCAGGCTGCGACAGGCACAAGAAATTATAGAAGAACTACTCAAACCCGTGGTACTGATTACTTTCCAACCTAATTCTTATCAAGTTTAATTTTGTTTATGATAGGGATGGGCCCAATAGATGATCCGTTATTTGTTCCATTCCATTCCACTTTTTGATCAGTGCATAGATAGTTTCATTATATGCAATATATGTTAACAGAAACATGTCCTTGGGTTAAGCTACATGGGTTTAGGTATCCTCGGAAGAAATTAGATATATGAGCATAACTCAAACCCAATTCATGGCTGATGCCTGCAGTCCAAGAATGGTTTTAGATTCATAGGAGTAGAAGGAATCAGAAGAATGAAAGGGAGATTTGTTGTCTAATCTCTGAAAGATGAACTGCTTTGTCTGTCAGTAGGGTAGGGGTGGATGGTTCATGCAACTCTGACGAATCATTTTTGTTAAGGTAAAAAGAAATTGTTCTCCTTGAGTGATGCAATCTAAATGTCAGCTCCATGTGTACGCAGGACGAGCCAAATGATTATATCAAAAGACAACAATTGCGTGAATTAGCAATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGCCCCAGCGGTAGTGTTTCTCCTTTCAATTCAAGCGGGATGAAGCGTGCAAAAACTGGTCGCTGA

mRNA sequence

ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCTCAGATTAGAACCAGCGGTGATGCTGACAGCCAGTACCTGTCGGAGCTGTTGGCCGAGCATCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTTTTAAATCAAGAGATTTTGCGGGTTTCCGGAATGATGTCCAACCAAGGTTTTAGTGAATTTGAGAGATTACGACATAGAAGCCCCAGTCCAATGGCTTCTTCTAACCTTGTGTCAAATATTTCTGGCACAGGTTTTGGCAGCTGGAATGGACTTCCTCAGGAACCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCGAATTTCAATTTTGTGGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAACGGGTAGAAGCTACTACAGGATGTCGTGTGTATATCAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGAAGAGAAGCTCCGAGGAAGACTTGGTTATGAACATCTGAACGAACCACTGCATGTCCTAATTGAGGCTGATTTACCAGCCAATATCATTGATATCAGGCTGCGACAGGCACAAGAAATTATAGAAGAACTACTCAAACCCGTGGACGAGCCAAATGATTATATCAAAAGACAACAATTGCGTGAATTAGCAATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGCCCCAGCGGTAGTGTTTCTCCTTTCAATTCAAGCGGGATGAAGCGTGCAAAAACTGGTCGCTGA

Coding sequence (CDS)

ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCTCAGATTAGAACCAGCGGTGATGCTGACAGCCAGTACCTGTCGGAGCTGTTGGCCGAGCATCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTTTTAAATCAAGAGATTTTGCGGGTTTCCGGAATGATGTCCAACCAAGGTTTTAGTGAATTTGAGAGATTACGACATAGAAGCCCCAGTCCAATGGCTTCTTCTAACCTTGTGTCAAATATTTCTGGCACAGGTTTTGGCAGCTGGAATGGACTTCCTCAGGAACCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCGAATTTCAATTTTGTGGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAACGGGTAGAAGCTACTACAGGATGTCGTGTGTATATCAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGAAGAGAAGCTCCGAGGAAGACTTGGTTATGAACATCTGAACGAACCACTGCATGTCCTAATTGAGGCTGATTTACCAGCCAATATCATTGATATCAGGCTGCGACAGGCACAAGAAATTATAGAAGAACTACTCAAACCCGTGGACGAGCCAAATGATTATATCAAAAGACAACAATTGCGTGAATTAGCAATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGCCCCAGCGGTAGTGTTTCTCCTTTCAATTCAAGCGGGATGAAGCGTGCAAAAACTGGTCGCTGA

Protein sequence

MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR*

Homology

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BLAST of Chy4G090410 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 1.7e-130
Identity = 232/284 (81.69%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MSGLYN-PNFSPARAASPQIRT-SGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEI 60
           MSGLYN  NFSP+RAASPQIRT S D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTM 120
            R++GMM NQGF++F+RLRHRSPSPMAS NL+SN+SG G G WNGLP E R+ G  GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180
           +WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPN 240
           GSIKDPEKEEKL+G+ GYEHLNE LH+LIEADLP +I+DI+LRQAQEIIEEL+KPVDE  
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNSN RE SPGPSGSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Chy4G090410 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.1e-128
Identity = 240/287 (83.62%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MSGLYNPN--FSPARAASPQIRTSGDAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQE 60
           MSGLYN +  FSPARAASPQIR++ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMT 120
           + RVSGMMSNQGF +F+RLRHRSPSPMASSNL+SN+S TG G WNGL QE RLSG PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 180
           MDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEP 240
           KGSIKDPEKE+KLRGR GYEHLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE 
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 NDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS N REESPGPS  GSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Chy4G090410 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.4e-113
Identity = 207/283 (73.14%), Postives = 241/283 (85.16%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTS-GDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEIL 60
           MSGLY+P FSPAR  SPQIR++  D DSQYL+ELLAEHQKLGPFMQ+LPICS+LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMD 120
           RVS ++ N GF +F+R R RSPSPM+S N  SN SG GF  WNGL QE RL    G +MD
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQE-RLGFPQGTSMD 120

Query: 121 WQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 180
           WQGAP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKG
Sbjct: 121 WQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 180

Query: 181 SIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND 240
           SIKDP KE+KLRG+ GYEHL++PLH+LIEA+ PA+IID RLR AQE+IEELLKPVDE  D
Sbjct: 181 SIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           + KRQQLRELAMLNS  RE+SP P GSVSPF++ GMKRAKTG+
Sbjct: 241 FYKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Chy4G090410 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.9e-75
Identity = 148/275 (53.82%), Postives = 190/275 (69.09%), Query Frame = 0


Query: 6   NPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMM 65
           +PNFS    + P          +YLSELLAE  KL PF+ +LP   RL+NQEILRV+ ++
Sbjct: 41  SPNFSGGLRSQPSFLVE---QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLL 100

Query: 66  SNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDWQGAPA 125
            N       + R   PSP+AS  +  N      G  +  P E  +S +P    +W  +P 
Sbjct: 101 EN----ALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERSVSSSP--APNWLNSPG 160

Query: 126 SPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPE 185
           S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP 
Sbjct: 161 SSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPI 220

Query: 186 KEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQ 245
           KE+ +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL PV+E +D+ K+QQ
Sbjct: 221 KEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQ 280

Query: 246 LRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKT 281
           LRELA+LN + REE    SGS+SP+NS GMKRAKT
Sbjct: 281 LRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Chy4G090410 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.0e-74
Identity = 149/275 (54.18%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 6   NPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMM 65
           +PN+S    +   +        +YLSELLAE  KL PF+ +LP   RLLNQEILRV+ ++
Sbjct: 45  SPNYSGGLRSQSSVFVE---QEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLL 104

Query: 66  SNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDWQGAPA 125
            N        L H  PSP+AS  +  N      G  +  P E  +  +PG   +W  +P 
Sbjct: 105 ENATVLSQSGLDH--PSPLASGGIFQNARADMNGWASQFPSERSVPSSPG--PNWLNSPG 164

Query: 126 SPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPE 185
           S S    KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP 
Sbjct: 165 SSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPI 224

Query: 186 KEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQ 245
           KEE +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL P++E +D  K+QQ
Sbjct: 225 KEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQ 284

Query: 246 LRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKT 281
           LRELA+LN   REE    SGSVSP+NS GMKRAKT
Sbjct: 285 LRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of Chy4G090410 vs. ExPASy TrEMBL
Match: A0A6J1DU72 (KH domain-containing protein At3g08620-like OS=Momordica charantia OX=3673 GN=LOC111024049 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.3e-153
Identity = 275/282 (97.52%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+FERLRHRSPSPMASSNLVSNISGTGFG WNGLPQEPRLSG+ GMTMDW
Sbjct: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFGGWNGLPQEPRLSGSSGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Chy4G090410 vs. ExPASy TrEMBL
Match: A0A6J1I3I7 (KH domain-containing protein At2g38610-like OS=Cucurbita maxima OX=3661 GN=LOC111470213 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.3e-151
Identity = 273/282 (96.81%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRTS DADSQYLSELLAEHQKLGPFMQILPIC RLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRTSADADSQYLSELLAEHQKLGPFMQILPICKRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+F+RLRHRSPSPMASSNL+SNISGTGFGSWNGLPQEPRLSGNPG TMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLMSNISGTGFGSWNGLPQEPRLSGNPGTTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKKILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPS-GSVSPFNSSGMKRAKTG 282
           IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTG
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG 282

[Close]

BLAST of Chy4G090410 vs. ExPASy TrEMBL
Match: A0A6J1FU50 (KH domain-containing protein At2g38610 OS=Cucurbita moschata OX=3662 GN=LOC111446905 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.3e-151
Identity = 273/282 (96.81%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRTS DADSQYLSELLAEHQKLGPFMQILPIC RLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRTSADADSQYLSELLAEHQKLGPFMQILPICKRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+F+RLRHRSPSPMASSNL+SNISGTGFGSWNGLPQEPRLSGNPG TMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLMSNISGTGFGSWNGLPQEPRLSGNPGTTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKKILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPS-GSVSPFNSSGMKRAKTG 282
           IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTG
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG 282

[Close]

BLAST of Chy4G090410 vs. ExPASy TrEMBL
Match: A0A6J1IZS3 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481428 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.7e-146
Identity = 262/282 (92.91%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADS YLSELLAEH KLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSHYLSELLAEHHKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           +SGMMSNQGFS+ ERLR RSPSPM SSNLVSN+SG GFG WNGLPQE  LSGNPGMTMDW
Sbjct: 61  ISGMMSNQGFSDLERLRQRSPSPMPSSNLVSNVSGAGFGGWNGLPQEQMLSGNPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRIL+LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILQLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDP+KEEKL GRLGYEHLNEPLHVLIEADLP NI+DIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPDKEEKLHGRLGYEHLNEPLHVLIEADLPPNIVDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSN REESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNLREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Chy4G090410 vs. ExPASy TrEMBL
Match: A0A7N2M4V9 (KH domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 257/282 (91.13%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR++ D DSQYLSELLAEHQKLGPFMQ+LPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSNPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+F+RLRHRSPSPMASSNL+S+++GTG G WNGLPQE RLSG PGMTMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLISSVTGTGLGGWNGLPQE-RLSGPPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSS+TVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDP+KEEKLRGR GYEHLNEPLH+LIEADLPAN++DIRLRQAQEIIEELLKPVDE  D+
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDF 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGS+SPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSISPFNSSGMKRAKTGR 281

[Close]

BLAST of Chy4G090410 vs. NCBI nr
Match: XP_004137670.3 (KH domain-containing protein At3g08620 [Cucumis sativus] >KGN58951.2 hypothetical protein Csa_001075 [Cucumis sativus])

HSP 1 Score: 564 bits (1454), Expect = 1.07e-201
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 70  MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 129

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW
Sbjct: 130 VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 189

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 190 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 249

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 250 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 309

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 310 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 351

[Close]

BLAST of Chy4G090410 vs. NCBI nr
Match: XP_038905002.1 (KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida])

HSP 1 Score: 559 bits (1440), Expect = 1.14e-200
Identity = 278/282 (98.58%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+SGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+FERLRHRSPSPMAS+NLVSNISGTGFG WNGLPQEPRLSGNPGMTMDW
Sbjct: 61  VSGMMSNQGFSDFERLRHRSPSPMASTNLVSNISGTGFGGWNGLPQEPRLSGNPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Chy4G090410 vs. NCBI nr
Match: XP_022157317.1 (KH domain-containing protein At3g08620-like [Momordica charantia])

HSP 1 Score: 551 bits (1420), Expect = 1.28e-197
Identity = 275/282 (97.52%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+FERLRHRSPSPMASSNLVSNISGTGFG WNGLPQEPRLSG+ GMTMDW
Sbjct: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFGGWNGLPQEPRLSGSSGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Chy4G090410 vs. NCBI nr
Match: XP_022941600.1 (KH domain-containing protein At2g38610 [Cucurbita moschata] >XP_022971516.1 KH domain-containing protein At2g38610-like [Cucurbita maxima] >XP_023539745.1 KH domain-containing protein At2g38610-like [Cucurbita pepo subsp. pepo] >KAG6596299.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027851.1 KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 545 bits (1405), Expect = 2.57e-195
Identity = 273/282 (96.81%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRTS DADSQYLSELLAEHQKLGPFMQILPIC RLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRTSADADSQYLSELLAEHQKLGPFMQILPICKRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+F+RLRHRSPSPMASSNL+SNISGTGFGSWNGLPQEPRLSGNPG TMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLMSNISGTGFGSWNGLPQEPRLSGNPGTTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKKILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSG-SVSPFNSSGMKRAKTG 281
           IKRQQLRELAMLNSNFREESPGPSG SVSPFNSSGMKRAKTG
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG 282

[Close]

BLAST of Chy4G090410 vs. NCBI nr
Match: XP_023527054.1 (KH domain-containing protein At3g08620-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 529 bits (1363), Expect = 6.26e-189
Identity = 263/282 (93.26%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADS YLSELLAEH KLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSHYLSELLAEHHKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+ ERLR RSPSPM SSNLVSN+SG GFG WNGLPQE  LSGNPGMTMDW
Sbjct: 61  VSGMMSNQGFSDLERLRQRSPSPMPSSNLVSNVSGAGFGGWNGLPQEQMLSGNPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRIL+LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILQLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEE+LRGRLGYEHLNEPLHVLIEADLP N +DIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEQLRGRLGYEHLNEPLHVLIEADLPPNTVDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSN REESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNLREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Chy4G090410 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 466.8 bits (1200), Expect = 1.2e-131
Identity = 232/284 (81.69%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MSGLYN-PNFSPARAASPQIRT-SGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEI 60
           MSGLYN  NFSP+RAASPQIRT S D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTM 120
            R++GMM NQGF++F+RLRHRSPSPMAS NL+SN+SG G G WNGLP E R+ G  GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180
           +WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPN 240
           GSIKDPEKEEKL+G+ GYEHLNE LH+LIEADLP +I+DI+LRQAQEIIEEL+KPVDE  
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNSN RE SPGPSGSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Chy4G090410 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 459.9 bits (1182), Expect = 1.5e-129
Identity = 240/287 (83.62%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MSGLYNPN--FSPARAASPQIRTSGDAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQE 60
           MSGLYN +  FSPARAASPQIR++ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMT 120
           + RVSGMMSNQGF +F+RLRHRSPSPMASSNL+SN+S TG G WNGL QE RLSG PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 180
           MDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEP 240
           KGSIKDPEKE+KLRGR GYEHLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE 
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 NDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS N REESPGPS  GSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Chy4G090410 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 459.9 bits (1182), Expect = 1.5e-129
Identity = 240/287 (83.62%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MSGLYNPN--FSPARAASPQIRTSGDAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQE 60
           MSGLYN +  FSPARAASPQIR++ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMT 120
           + RVSGMMSNQGF +F+RLRHRSPSPMASSNL+SN+S TG G WNGL QE RLSG PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 180
           MDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEP 240
           KGSIKDPEKE+KLRGR GYEHLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE 
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 NDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS N REESPGPS  GSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Chy4G090410 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 282.3 bits (721), Expect = 4.2e-76
Identity = 148/275 (53.82%), Postives = 190/275 (69.09%), Query Frame = 0


Query: 6   NPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMM 65
           +PNFS    + P          +YLSELLAE  KL PF+ +LP   RL+NQEILRV+ ++
Sbjct: 41  SPNFSGGLRSQPSFLVE---QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLL 100

Query: 66  SNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDWQGAPA 125
            N       + R   PSP+AS  +  N      G  +  P E  +S +P    +W  +P 
Sbjct: 101 EN----ALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERSVSSSP--APNWLNSPG 160

Query: 126 SPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPE 185
           S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP 
Sbjct: 161 SSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPI 220

Query: 186 KEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQ 245
           KE+ +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL PV+E +D+ K+QQ
Sbjct: 221 KEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQ 280

Query: 246 LRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKT 281
           LRELA+LN + REE    SGS+SP+NS GMKRAKT
Sbjct: 281 LRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Chy4G090410 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 279.3 bits (713), Expect = 3.5e-75
Identity = 149/275 (54.18%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 6   NPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMM 65
           +PN+S    +   +        +YLSELLAE  KL PF+ +LP   RLLNQEILRV+ ++
Sbjct: 45  SPNYSGGLRSQSSVFVE---QEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLL 104

Query: 66  SNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDWQGAPA 125
            N        L H  PSP+AS  +  N      G  +  P E  +  +PG   +W  +P 
Sbjct: 105 ENATVLSQSGLDH--PSPLASGGIFQNARADMNGWASQFPSERSVPSSPG--PNWLNSPG 164

Query: 126 SPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPE 185
           S S    KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP 
Sbjct: 165 SSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPI 224

Query: 186 KEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQ 245
           KEE +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL P++E +D  K+QQ
Sbjct: 225 KEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQ 284

Query: 246 LRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKT 281
           LRELA+LN   REE    SGSVSP+NS GMKRAKT
Sbjct: 285 LRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Chy4G090410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYR4	1.7e-130	81.69	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q9ZVI3	2.1e-128	83.62	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q75GR5	1.4e-113	73.14	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	5.9e-75	53.82	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	5.0e-74	54.18	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Chy4G090410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU72	4.3e-153	97.52	KH domain-containing protein At3g08620-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1I3I7	2.3e-151	96.81	KH domain-containing protein At2g38610-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FU50	2.3e-151	96.81	KH domain-containing protein At2g38610 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IZS3	1.7e-146	92.91	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A7N2M4V9	1.2e-144	91.13	KH domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Chy4G090410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137670.3	1.07e-201	100.00	KH domain-containing protein At3g08620 [Cucumis sativus] >KGN58951.2 hypothetica...	[more]
XP_038905002.1	1.14e-200	98.58	KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]	[more]
XP_022157317.1	1.28e-197	97.52	KH domain-containing protein At3g08620-like [Momordica charantia]	[more]
XP_022941600.1	2.57e-195	96.81	KH domain-containing protein At2g38610 [Cucurbita moschata] >XP_022971516.1 KH d...	[more]
XP_023527054.1	6.26e-189	93.26	KH domain-containing protein At3g08620-like isoform X1 [Cucurbita pepo subsp. pe...	[more]

BLAST of Chy4G090410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08620.1	1.2e-131	81.69	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	1.5e-129	83.62	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	1.5e-129	83.62	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	4.2e-76	53.82	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	3.5e-75	54.18	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 132..232 e-value: 1.6E-6 score: 37.7
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 25..72 e-value: 7.2E-14 score: 51.2
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 20..263 e-value: 1.6E-69 score: 236.0
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 139..257
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 149..187 e-value: 2.1E-5 score: 24.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..282
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..282
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 149..206 score: 8.428877
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 137..257 e-value: 3.71384E-54 score: 169.732
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G090410.1	Chy4G090410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding