Chy4G088910 (gene) Cucumber (hystrix) v1

Overview
NameChy4G088910
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionC2H2-type domain-containing protein
LocationchrH04: 26803691 .. 26804500 (-)
RNA-Seq ExpressionChy4G088910
SyntenyChy4G088910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGGAAACAAAAAGAGGAGGAAGAAGAAGAAGATAGAGAAAGAGAAAAAGATGATCTTGATGATATTAATTTTGAAGGTTCAAAAACAAAAACCTCTTTCCAATATGAAGATTATTCATTATTGTCATGGGAAGAACAAGCTTTTGCTGAAGATGCTGCTCGTCTTGGACCTTGTGTTTGGCCACCAACCTCTTATTCTTGCTCCTTTTGTAGAAGAGAATTTCGTTCAGCTCAAGCTTTGGGTGGCCACATGAACGTTCATAGAAGAGATAGGGCCATGTTAAACCAATCCTCCAATAACAACAACGACCCTAATTTCACTACTACTACTAATTCCTTGTCCTTGTTTCAATCCCCTTCTTCTTCTTCTTCTCATCACAATCTTTCAACTTTACTTAACCCTAATCCTTCGTCCGCAGTAACAGCTTCTTATGGTGGTCGATCGGATTCAAAGGCTCTGGGGAAAGATGTGATCGGGAGTTCTTGTTCTAGGGTTAGGGACAAACATCATGTGGGAATTGGGGTTTTGGATGAGGGGTTGAATTTTGGTTTTGGTCCATCTCAGCCGACGACGTCGAGTTTGTTTTATCACGATGACGATCAAGATGACCCGGGCGTGGTGGCAGGATGCAAGAGGAGGAAAACTGATGATGAAACGTCGACGATACAATTTTATGTGAAGTCGAGTAATTTGGTAGAAAATCATCATCATCAACATATTCAATCAGAGGTAATTGGACTTAGTTCTACCTCCTTACATGATTTGGATCTTGAACTCAGGCTTGGTGGTCTCTCTAAAGGTTGA

mRNA sequence

ATGTGGAGGAAACAAAAAGAGGAGGAAGAAGAAGAAGATAGAGAAAGAGAAAAAGATGATCTTGATGATATTAATTTTGAAGGTTCAAAAACAAAAACCTCTTTCCAATATGAAGATTATTCATTATTGTCATGGGAAGAACAAGCTTTTGCTGAAGATGCTGCTCGTCTTGGACCTTGTGTTTGGCCACCAACCTCTTATTCTTGCTCCTTTTGTAGAAGAGAATTTCGTTCAGCTCAAGCTTTGGGTGGCCACATGAACGTTCATAGAAGAGATAGGGCCATGTTAAACCAATCCTCCAATAACAACAACGACCCTAATTTCACTACTACTACTAATTCCTTGTCCTTGTTTCAATCCCCTTCTTCTTCTTCTTCTCATCACAATCTTTCAACTTTACTTAACCCTAATCCTTCGTCCGCAGTAACAGCTTCTTATGGTGGTCGATCGGATTCAAAGGCTCTGGGGAAAGATGTGATCGGGAGTTCTTGTTCTAGGGTTAGGGACAAACATCATGTGGGAATTGGGGTTTTGGATGAGGGGTTGAATTTTGGTTTTGGTCCATCTCAGCCGACGACGTCGAGTTTGTTTTATCACGATGACGATCAAGATGACCCGGGCGTGGTGGCAGGATGCAAGAGGAGGAAAACTGATGATGAAACGTCGACGATACAATTTTATGTGAAGTCGAGTAATTTGGTAGAAAATCATCATCATCAACATATTCAATCAGAGGTAATTGGACTTAGTTCTACCTCCTTACATGATTTGGATCTTGAACTCAGGCTTGGTGGTCTCTCTAAAGGTTGA

Coding sequence (CDS)

ATGTGGAGGAAACAAAAAGAGGAGGAAGAAGAAGAAGATAGAGAAAGAGAAAAAGATGATCTTGATGATATTAATTTTGAAGGTTCAAAAACAAAAACCTCTTTCCAATATGAAGATTATTCATTATTGTCATGGGAAGAACAAGCTTTTGCTGAAGATGCTGCTCGTCTTGGACCTTGTGTTTGGCCACCAACCTCTTATTCTTGCTCCTTTTGTAGAAGAGAATTTCGTTCAGCTCAAGCTTTGGGTGGCCACATGAACGTTCATAGAAGAGATAGGGCCATGTTAAACCAATCCTCCAATAACAACAACGACCCTAATTTCACTACTACTACTAATTCCTTGTCCTTGTTTCAATCCCCTTCTTCTTCTTCTTCTCATCACAATCTTTCAACTTTACTTAACCCTAATCCTTCGTCCGCAGTAACAGCTTCTTATGGTGGTCGATCGGATTCAAAGGCTCTGGGGAAAGATGTGATCGGGAGTTCTTGTTCTAGGGTTAGGGACAAACATCATGTGGGAATTGGGGTTTTGGATGAGGGGTTGAATTTTGGTTTTGGTCCATCTCAGCCGACGACGTCGAGTTTGTTTTATCACGATGACGATCAAGATGACCCGGGCGTGGTGGCAGGATGCAAGAGGAGGAAAACTGATGATGAAACGTCGACGATACAATTTTATGTGAAGTCGAGTAATTTGGTAGAAAATCATCATCATCAACATATTCAATCAGAGGTAATTGGACTTAGTTCTACCTCCTTACATGATTTGGATCTTGAACTCAGGCTTGGTGGTCTCTCTAAAGGTTGA

Protein sequence

MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQSPSSSSSHHNLSTLLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDEGLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHHHQHIQSEVIGLSSTSLHDLDLELRLGGLSKG*
Homology
BLAST of Chy4G088910 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-15
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 46  EEQAF--AEDAARLGPCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSS 101
           EE+AF  AE+    G C+WPP SYSCSFC REF+SAQALGGHMNVHRRDRA L Q S
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS 88

BLAST of Chy4G088910 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.5e-15
Identity = 48/88 (54.55%), Postives = 57/88 (64.77%), Query Frame = 0

Query: 44  SWEEQAFAEDAARLGPCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNN 103
           SWEE AFAED A     +WPP SY+CSFCRREF+SAQALGGHMNVHRRDRA L Q+    
Sbjct: 18  SWEELAFAEDDA--AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA---- 77

Query: 104 NDPNFTTTTNSLSLFQSPSSSSSHHNLS 132
           +D      ++S   + S   S + H  S
Sbjct: 78  DDQYLFPKSSSSPEYPSHKDSDNIHETS 99

BLAST of Chy4G088910 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 55/119 (46.22%), Postives = 64/119 (53.78%), Query Frame = 0

Query: 62  WPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDP-NFTTTTNSLSLFQS 121
           WPP +Y+CSFCRREFRSAQALGGHMNVHRRDRA L Q  +   +P + T   N    F S
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

Query: 122 PSSSS--------SHHNLSTLLNPNPSSAV-----TASYGGRSDSKALGKDVIGSSCSR 167
            SSSS        S  N  +   P PS+       T SYGG    +   K  +   CSR
Sbjct: 104 SSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNV---CSR 159

BLAST of Chy4G088910 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.4e-11
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 62  WPPTSYSCSFCRREFRSAQALGGHMNVHRRDRA--MLNQSSNNNNDPNFTTTTNSLSLFQ 121
           WPP SY+CSFC+REFRSAQALGGHMNVHRRDRA   L QS ++++ P+      + S   
Sbjct: 42  WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYST 101

Query: 122 SPSSSSSHHNLSTL---LNPNPSS 141
             +S   HH+  TL   L+P PSS
Sbjct: 102 MANSPPPHHSPLTLFPTLSP-PSS 124

BLAST of Chy4G088910 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 0

Query: 66  SYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNN 105
           SY CSFC R F +AQALGGHMN+HRRDRA L Q    +N
Sbjct: 34  SYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDN 72

BLAST of Chy4G088910 vs. ExPASy TrEMBL
Match: A0A0A0LD32 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733980 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 266/271 (98.15%), Postives = 267/271 (98.52%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60
           MWRKQKEEEEEEDREREKDDLDD+NFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC
Sbjct: 1   MWRKQKEEEEEEDREREKDDLDDVNFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60

Query: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120
           VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS
Sbjct: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120

Query: 121 P-SSSSSHHNLSTLLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLD 180
           P SSSSSHHNLSTL NPNPSSAVTAS GGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLD
Sbjct: 121 PSSSSSSHHNLSTLPNPNPSSAVTASCGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLD 180

Query: 181 EGLNF-GFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHH 240
           EGLNF GFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHH
Sbjct: 181 EGLNFGGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHH 240

Query: 241 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 270
           HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG
Sbjct: 241 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 271

BLAST of Chy4G088910 vs. ExPASy TrEMBL
Match: A0A5A7TLB0 (Putative nucleic acid binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001450 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.7e-122
Identity = 241/271 (88.93%), Postives = 245/271 (90.41%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60
           MWRKQKEEEEEEDREREKDD DDIN E SKTKTSFQYED+SLLSWEEQAFAEDAARLGPC
Sbjct: 1   MWRKQKEEEEEEDREREKDDFDDINVEVSKTKTSFQYEDHSLLSWEEQAFAEDAARLGPC 60

Query: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120
           VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSS NNN+PNF  +TN LSLFQS
Sbjct: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSINNNNPNF-ASTNCLSLFQS 120

Query: 121 PSSSSSHHNLSTLLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDE 180
           PSSSSSHH LSTL NPNPS  VTAS GGR  SK LGKDV  SSCSRVRDKH VGIGV DE
Sbjct: 121 PSSSSSHHYLSTLPNPNPSFGVTASCGGR--SKDLGKDV-RSSCSRVRDKHQVGIGVFDE 180

Query: 181 GLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVEN--HH 240
           GLNFGFG S+ TTS LFYHDDDQDDPGVVAGCKRRKTDDETS IQFYVKSSNLVEN  HH
Sbjct: 181 GLNFGFGRSRTTTSGLFYHDDDQDDPGVVAGCKRRKTDDETSPIQFYVKSSNLVENQHHH 240

Query: 241 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 270
           H HIQSEVIGLSSTSLHDLDLELRLGGLSKG
Sbjct: 241 HHHIQSEVIGLSSTSLHDLDLELRLGGLSKG 267

BLAST of Chy4G088910 vs. ExPASy TrEMBL
Match: A0A1S4DV71 (uncharacterized protein LOC103487126 OS=Cucumis melo OX=3656 GN=LOC103487126 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.7e-122
Identity = 241/271 (88.93%), Postives = 245/271 (90.41%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60
           MWRKQKEEEEEEDREREKDD DDIN E SKTKTSFQYED+SLLSWEEQAFAEDAARLGPC
Sbjct: 1   MWRKQKEEEEEEDREREKDDFDDINVEVSKTKTSFQYEDHSLLSWEEQAFAEDAARLGPC 60

Query: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120
           VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSS NNN+PNF  +TN LSLFQS
Sbjct: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSINNNNPNF-ASTNCLSLFQS 120

Query: 121 PSSSSSHHNLSTLLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDE 180
           PSSSSSHH LSTL NPNPS  VTAS GGR  SK LGKDV  SSCSRVRDKH VGIGV DE
Sbjct: 121 PSSSSSHHYLSTLPNPNPSFGVTASCGGR--SKDLGKDV-RSSCSRVRDKHQVGIGVFDE 180

Query: 181 GLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVEN--HH 240
           GLNFGFG S+ TTS LFYHDDDQDDPGVVAGCKRRKTDDETS IQFYVKSSNLVEN  HH
Sbjct: 181 GLNFGFGRSRTTTSGLFYHDDDQDDPGVVAGCKRRKTDDETSPIQFYVKSSNLVENQHHH 240

Query: 241 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 270
           H HIQSEVIGLSSTSLHDLDLELRLGGLSKG
Sbjct: 241 HHHIQSEVIGLSSTSLHDLDLELRLGGLSKG 267

BLAST of Chy4G088910 vs. ExPASy TrEMBL
Match: A0A6J1F1X7 (probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=LOC111441415 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.4e-65
Identity = 161/276 (58.33%), Postives = 187/276 (67.75%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAA-RLGP 60
           MWRKQ+EE +  D     DD  D     +KTKT F YED    SWEEQAFAEDAA  LG 
Sbjct: 1   MWRKQQEERQTHD----CDDSVDSQSSKTKTKTPFGYED--PFSWEEQAFAEDAAGGLGG 60

Query: 61  CVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQ 120
           CVWPP SYSCSFCRREFRSAQALGGHMNVHRRDRA L QS N    PN    TNS   FQ
Sbjct: 61  CVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNT---PNHNPFTNSFP-FQ 120

Query: 121 SPSSSSSHHNLST----LLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGI 180
           SPSSS+  ++L T    L++P P + +T        SKA   + + +SCSRVRD  HVGI
Sbjct: 121 SPSSSTFSYHLPTPKPYLVHPPPPNRLT--------SKAGKDENLTNSCSRVRDNDHVGI 180

Query: 181 GVLDEGLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVE 240
           G+LD+GLNF FGP  P  S LF  D  +++ G    CK+RKTDDETS+IQ YVKS+N VE
Sbjct: 181 GILDDGLNFSFGPPWP-ASGLFDDDGGREEAGTDTSCKKRKTDDETSSIQLYVKSNNSVE 240

Query: 241 NHHHQH-----IQSEVIGLSSTSLHDLDLELRLGGL 267
           NHHH+      I+SEVIG+SS+  HDLDLELRLGG+
Sbjct: 241 NHHHRRRRGDPIESEVIGVSSSPFHDLDLELRLGGV 257

BLAST of Chy4G088910 vs. ExPASy TrEMBL
Match: A0A6J1CVW0 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015051 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50
Identity = 143/272 (52.57%), Postives = 167/272 (61.40%), Query Frame = 0

Query: 16  REKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAA---RLGPCVWPPTSYSCSFC 75
           +++ D D  +   +KTK+SF+Y +    SWEEQAFAEDAA   RLG CVWPP SYSCSFC
Sbjct: 4   KQRHDFDFDDSSATKTKSSFEYNE----SWEEQAFAEDAAAAGRLGGCVWPPRSYSCSFC 63

Query: 76  RREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTT-----TNSLSLFQSPSSSSSH 135
           RREFRSAQALGGHMNVHRRDRA L QS N  N PNFT T     + S     S SSS++H
Sbjct: 64  RREFRSAQALGGHMNVHRRDRARLKQSPNPQNFPNFTPTLPFQFSPSHHQLISTSSSTTH 123

Query: 136 HNLSTL----LNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHV--GIGVLDEG 195
            + S      L+P P+         RSDS+         SC RV DK HV    G  +EG
Sbjct: 124 PSCSGFCSDELDPRPT---------RSDSRI--------SCPRVMDKDHVIEAAGFSNEG 183

Query: 196 -LNFGFGPSQPTTSSLFYHDDD---QDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENH 255
            LNFG    +P        DDD   +D+ G   GCK+RKTDDE S IQFY        + 
Sbjct: 184 QLNFGLRQPRPEEEE---DDDDNGGRDETGAATGCKKRKTDDEKS-IQFY--------HL 242

Query: 256 HHQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 270
           HH HIQSEVIG+SS+ LHD+DLELRLGGLSKG
Sbjct: 244 HHHHIQSEVIGISSSQLHDVDLELRLGGLSKG 242

BLAST of Chy4G088910 vs. NCBI nr
Match: KAE8651000.1 (hypothetical protein Csa_000729, partial [Cucumis sativus])

HSP 1 Score: 512 bits (1319), Expect = 2.92e-182
Identity = 266/271 (98.15%), Postives = 267/271 (98.52%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60
           MWRKQKEEEEEEDREREKDDLDD+NFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC
Sbjct: 24  MWRKQKEEEEEEDREREKDDLDDVNFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 83

Query: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120
           VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS
Sbjct: 84  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 143

Query: 121 PSSSSS-HHNLSTLLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLD 180
           PSSSSS HHNLSTL NPNPSSAVTAS GGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLD
Sbjct: 144 PSSSSSSHHNLSTLPNPNPSSAVTASCGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLD 203

Query: 181 EGLNFG-FGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHH 240
           EGLNFG FGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHH
Sbjct: 204 EGLNFGGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHH 263

Query: 241 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 269
           HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG
Sbjct: 264 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 294

BLAST of Chy4G088910 vs. NCBI nr
Match: XP_016899605.1 (PREDICTED: uncharacterized protein LOC103487126 [Cucumis melo] >KAA0044112.1 putative nucleic acid binding protein [Cucumis melo var. makuwa] >TYK25026.1 putative nucleic acid binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 445 bits (1144), Expect = 5.05e-156
Identity = 241/271 (88.93%), Postives = 245/271 (90.41%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60
           MWRKQKEEEEEEDREREKDD DDIN E SKTKTSFQYED+SLLSWEEQAFAEDAARLGPC
Sbjct: 1   MWRKQKEEEEEEDREREKDDFDDINVEVSKTKTSFQYEDHSLLSWEEQAFAEDAARLGPC 60

Query: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120
           VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSS NNN+PNF +T N LSLFQS
Sbjct: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSINNNNPNFAST-NCLSLFQS 120

Query: 121 PSSSSSHHNLSTLLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDE 180
           PSSSSSHH LSTL NPNPS  VTAS GGRS  K LGKDV  SSCSRVRDKH VGIGV DE
Sbjct: 121 PSSSSSHHYLSTLPNPNPSFGVTASCGGRS--KDLGKDVR-SSCSRVRDKHQVGIGVFDE 180

Query: 181 GLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVEN--HH 240
           GLNFGFG S+ TTS LFYHDDDQDDPGVVAGCKRRKTDDETS IQFYVKSSNLVEN  HH
Sbjct: 181 GLNFGFGRSRTTTSGLFYHDDDQDDPGVVAGCKRRKTDDETSPIQFYVKSSNLVENQHHH 240

Query: 241 HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 269
           H HIQSEVIGLSSTSLHDLDLELRLGGLSKG
Sbjct: 241 HHHIQSEVIGLSSTSLHDLDLELRLGGLSKG 267

BLAST of Chy4G088910 vs. NCBI nr
Match: XP_038905404.1 (zinc finger protein 11-like [Benincasa hispida])

HSP 1 Score: 350 bits (898), Expect = 1.14e-118
Identity = 208/276 (75.36%), Postives = 221/276 (80.07%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAARLGPC 60
           MWRKQ+EEEE     RE+DD DD NFEGSKTKT FQYE+   LSWEEQAFAEDA RLG C
Sbjct: 1   MWRKQEEEEE-----RERDDFDD-NFEGSKTKTCFQYEE--SLSWEEQAFAEDAGRLGAC 60

Query: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQS 120
           VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRA L QS NNNN+PNFTTT  SL+LFQS
Sbjct: 61  VWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNNNNNPNFTTTDYSLTLFQS 120

Query: 121 PSSSSSHHNLSTLL-----NPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGI 180
            SSSS HH+LS+L      NPNPS       GGRSDSKA   + + +SCSRVRDK HVGI
Sbjct: 121 RSSSS-HHHLSSLPDYHLPNPNPS----LPDGGRSDSKAGKDEELINSCSRVRDKDHVGI 180

Query: 181 GVLDEGLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDET-STIQFYVKSSNLV 240
           GV DEGLNFGFG S+PT S LF  DD +DD G V GCKRRKTDD T S IQFYVKSS+LV
Sbjct: 181 GVPDEGLNFGFGRSRPT-SGLF-DDDGRDDAGAVTGCKRRKTDDATTSPIQFYVKSSSLV 240

Query: 241 ENHH-HQHIQSEVIGLSSTSLHDLDLELRLGGLSKG 269
           ENHH H HIQSEVIGL STSLHDLDLELRLGGLSKG
Sbjct: 241 ENHHQHHHIQSEVIGLRSTSLHDLDLELRLGGLSKG 261

BLAST of Chy4G088910 vs. NCBI nr
Match: XP_011652839.1 (uncharacterized protein LOC105435125 [Cucumis sativus])

HSP 1 Score: 343 bits (880), Expect = 4.50e-117
Identity = 182/186 (97.85%), Postives = 182/186 (97.85%), Query Frame = 0

Query: 86  MNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQSPSSSSS-HHNLSTLLNPNPSSAVTA 145
           MNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQSPSSSSS HHNLSTL NPNPSSAVTA
Sbjct: 1   MNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQSPSSSSSSHHNLSTLPNPNPSSAVTA 60

Query: 146 SYGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDEGLNFG-FGPSQPTTSSLFYHDDDQ 205
           S GGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDEGLNFG FGPSQPTTSSLFYHDDDQ
Sbjct: 61  SCGGRSDSKALGKDVIGSSCSRVRDKHHVGIGVLDEGLNFGGFGPSQPTTSSLFYHDDDQ 120

Query: 206 DDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHHHQHIQSEVIGLSSTSLHDLDLELRL 265
           DDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHHHQHIQSEVIGLSSTSLHDLDLELRL
Sbjct: 121 DDPGVVAGCKRRKTDDETSTIQFYVKSSNLVENHHHQHIQSEVIGLSSTSLHDLDLELRL 180

Query: 266 GGLSKG 269
           GGLSKG
Sbjct: 181 GGLSKG 186

BLAST of Chy4G088910 vs. NCBI nr
Match: KAG6580524.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256 bits (654), Expect = 1.11e-81
Identity = 161/276 (58.33%), Postives = 187/276 (67.75%), Query Frame = 0

Query: 1   MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDAAR-LGP 60
           MWRKQ+EE +  D     DD  D     +KTKT F YED    SWEEQAFAEDAA  LG 
Sbjct: 1   MWRKQQEERQTHDC----DDSVDSQSSKTKTKTPFAYED--PFSWEEQAFAEDAAGGLGG 60

Query: 61  CVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDPNFTTTTNSLSLFQ 120
           CVWPP SYSCSFCRREFRSAQALGGHMNVHRRDRA L QS N    PN    TNS   FQ
Sbjct: 61  CVWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPNT---PNHNPFTNSFP-FQ 120

Query: 121 SPSSSSSHHNLST----LLNPNPSSAVTASYGGRSDSKALGKDVIGSSCSRVRDKHHVGI 180
           SPSSS+  ++L T    L++P P + +T        SKA   + + +SCSRVRD  HVGI
Sbjct: 121 SPSSSTFSYHLPTPKPYLVHPPPPNRLT--------SKAGKDENLTNSCSRVRDNDHVGI 180

Query: 181 GVLDEGLNFGFGPSQPTTSSLFYHDDDQDDPGVVAGCKRRKTDDETSTIQFYVKSSNLVE 240
           G+LD+GLNF FGP  PT S LF  D  +++ G    CK+RKTDDETS+IQ YV S+N VE
Sbjct: 181 GILDDGLNFSFGPPWPT-SGLFDDDGGREEAGTDTSCKKRKTDDETSSIQLYVNSNNSVE 240

Query: 241 NHHHQH-----IQSEVIGLSSTSLHDLDLELRLGGL 266
           NHHH+      I+SEVIG+SS+  HDLDLELRLGG+
Sbjct: 241 NHHHRRRRGDPIESEVIGVSSSPFHDLDLELRLGGV 257

BLAST of Chy4G088910 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-16
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 46  EEQAF--AEDAARLGPCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSS 101
           EE+AF  AE+    G C+WPP SYSCSFC REF+SAQALGGHMNVHRRDRA L Q S
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS 88

BLAST of Chy4G088910 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 82.4 bits (202), Expect = 6.1e-16
Identity = 48/88 (54.55%), Postives = 57/88 (64.77%), Query Frame = 0

Query: 44  SWEEQAFAEDAARLGPCVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNN 103
           SWEE AFAED A     +WPP SY+CSFCRREF+SAQALGGHMNVHRRDRA L Q+    
Sbjct: 18  SWEELAFAEDDA--AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA---- 77

Query: 104 NDPNFTTTTNSLSLFQSPSSSSSHHNLS 132
           +D      ++S   + S   S + H  S
Sbjct: 78  DDQYLFPKSSSSPEYPSHKDSDNIHETS 99

BLAST of Chy4G088910 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-13
Identity = 44/95 (46.32%), Postives = 50/95 (52.63%), Query Frame = 0

Query: 1  MWRKQKEEEEEEDREREKDDLDDINFEGSKTKTSFQYEDYSLLSWEEQAFAEDA-ARLGP 60
          MW   K EE E+D E                            SWE +AF +D    +  
Sbjct: 7  MWNPNKIEELEDDDE----------------------------SWEVKAFEQDTKGNISG 66

Query: 61 CVWPPTSYSCSFCRREFRSAQALGGHMNVHRRDRA 95
            WPP SY+C+FCRREFRSAQALGGHMNVHRRDRA
Sbjct: 67 TTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

BLAST of Chy4G088910 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-12
Identity = 55/119 (46.22%), Postives = 64/119 (53.78%), Query Frame = 0

Query: 62  WPPTSYSCSFCRREFRSAQALGGHMNVHRRDRAMLNQSSNNNNDP-NFTTTTNSLSLFQS 121
           WPP +Y+CSFCRREFRSAQALGGHMNVHRRDRA L Q  +   +P + T   N    F S
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

Query: 122 PSSSS--------SHHNLSTLLNPNPSSAV-----TASYGGRSDSKALGKDVIGSSCSR 167
            SSSS        S  N  +   P PS+       T SYGG    +   K  +   CSR
Sbjct: 104 SSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNV---CSR 159

BLAST of Chy4G088910 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-12
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 62  WPPTSYSCSFCRREFRSAQALGGHMNVHRRDRA--MLNQSSNNNNDPNFTTTTNSLSLFQ 121
           WPP SY+CSFC+REFRSAQALGGHMNVHRRDRA   L QS ++++ P+      + S   
Sbjct: 42  WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYST 101

Query: 122 SPSSSSSHHNLSTL---LNPNPSS 141
             +S   HH+  TL   L+P PSS
Sbjct: 102 MANSPPPHHSPLTLFPTLSP-PSS 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LHS92.2e-1571.93Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G... [more]
O809428.5e-1554.55Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
Q9SLB81.5e-1146.22Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
Q388954.4e-1153.57Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
Q9SR342.5e-0666.67Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LD321.5e-14298.15C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733980 P... [more]
A0A5A7TLB03.7e-12288.93Putative nucleic acid binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S4DV713.7e-12288.93uncharacterized protein LOC103487126 OS=Cucumis melo OX=3656 GN=LOC103487126 PE=... [more]
A0A6J1F1X71.4e-6558.33probable transcriptional regulator RABBIT EARS OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1CVW01.3e-5052.57transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
Match NameE-valueIdentityDescription
KAE8651000.12.92e-18298.15hypothetical protein Csa_000729, partial [Cucumis sativus][more]
XP_016899605.15.05e-15688.93PREDICTED: uncharacterized protein LOC103487126 [Cucumis melo] >KAA0044112.1 put... [more]
XP_038905404.11.14e-11875.36zinc finger protein 11-like [Benincasa hispida][more]
XP_011652839.14.50e-11797.85uncharacterized protein LOC105435125 [Cucumis sativus][more]
KAG6580524.11.11e-8158.33Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT5G06070.11.6e-1671.93C2H2 and C2HC zinc fingers superfamily protein [more]
AT2G37740.16.1e-1654.55zinc-finger protein 10 [more]
AT4G17810.12.2e-1346.32C2H2 and C2HC zinc fingers superfamily protein [more]
AT2G42410.11.1e-1246.22zinc finger protein 11 [more]
AT3G23130.13.1e-1253.57C2H2 and C2HC zinc fingers superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..27
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 67..91
e-value: 1.1E-5
score: 25.3
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 64..120
e-value: 1.7E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR45801:SF68CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEINcoord: 18..265
NoneNo IPR availablePANTHERPTHR45801OS07G0101800 PROTEINcoord: 18..265
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 67..89
e-value: 0.0098
score: 25.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 69..89
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 67..94
score: 11.219034
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 65..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G088910.1Chy4G088910.1mRNA