Chy4G075830 (gene) Cucumber (hystrix) v1

Overview
NameChy4G075830
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein FAM98A-like isoform X1
LocationchrH04: 11408381 .. 11410775 (-)
RNA-Seq ExpressionChy4G075830
SyntenyChy4G075830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGATACCAGAAGGTCGAGAAACCCAAACCCGAATCACCCATTAACGAAAATGAAATCCGAATCACTAGTCAAGGTGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGTATATCTCCTCCTCATTCATTCAATCTCTTTTCTCTTTCACTTCCATCTCCTTAAATTCGACTTCCTCTTCCTGATTTTCTGCCAATGCTGTTTCTCTTCTCTACAACTTTCCTGTTTTTGTTTTTTGATTTTTTTTTTAATTTGGAAAAGTTTTAGTGTTTTATCGATTTGGGTATTTGTCGTTGGATGATTTTTTTTCTATTGTATTAGTATGTTAATGATGACTTTTCTGATCTGTTTTTGGGTCGTAATTAGTTTTACTGGATGTGCCTGCTGTTTTTACAATGAACAAATATTGGAGGATTCTAAGGACATAATGAACACACTCTAATTGATGACTGACTGACTATGGAGGACAGGGACTAACTACAAAACTCATTGAACTAGAACTATGCAGATAAGCAATAAAAACATTAGTCTCCAAGCTCTATATTTAACGTTTAAACATCGTGTAAGTTATTTTTTTTTATTTAATTTATAATGTGCCCACTACTTTGATGTCCTACTGTCATCTTTTCTAGAGATAGATGACGTTAGCTTTAATGCCTTGTTGCATCTCGTCTTCTTATTCTTCTCATTTTTTTTATCTTGTTCTTGTTATTTTTTAAGCACCTTTTTCTTCTGTGTATGTTGTTTGTTTGAATAATTGTCTATAGTGTTTTGGTTATCAGAAAAAACTGTAATACATAGAATATTGGTGTTCTTGGAACTTATTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGTCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGGTTAATTTTCCTTAAGACTACTTGTGCGTTTGAGTGCAAATATTGTGTATTTCATAATTCACAAGCCATGTGTATCCTCGAAACAGAAGAGAATATCACGATTGCATCAAGAAACTGCTATCAGCTCAGTTAGCATAACCGATGTATGGGAACCCATTGAGGAAGGTCTCGTACCGTAAGTTTTCTTAGTCTCTGCAATGAACGTTAATCGTACAACAAATAATTGAAAGCTTATTTGTGTTTTACTTTTAGTTAATTTGCTCTCACGCTATATGCATTGCTTGCAACTTCGTTGCATGTTCTATGGGTTTGTACTAAGTAGCCTAGTTCTTTAGATGTGCAAGAAATAACTTCTATCATGTCACACAGGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACGTTATCCAATCGAGAGCTAAATAAAAATTCTCCAGGGTAAGTTGTTTTTGGGAACTTTAAAATTTGGTATAAAATGTGGGATTTAGCTACTTTTCTTTCATATTTCATGCTTTGGTTTCTTCTGCGTGTATGATGACGAACTAATTTCTGTGGGTAGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACCACCACCACCCAGACAACCACGTGTTTATCACAATGCTGTCCATGAAGGTGATTTCAGCAACACTTTATTATTGGATTATGGAACTCTACCTTGTCTGGGATTTGACATGTTACTGCCACTTTGCAGATCCATATGGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTATCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCACTACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGACAACTACCAAGGTGGACCTGGATATTATCAAGGTGAATATTGAAGAGTCGAATATTTTCAATAGAAGTAATGCTTTAAAAGTTTCACTGTATTGCATTTGACTTGATATTGTTCTGGAGTGTGATTTTTAACTCTCGTGAGCTTTCTTCATCTTAGATAGTAACGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGTAAGTTTCTTTCTTTATGCACGGAAGTATGTTCTTGAGTTGACTGCAGGAATGTTTTGAATATAAACACAATACATTGAGAGTCTGGAAAGGCATTTGACTCATTGATTTATCTTCAAAGTTATAACTAGTAATTTAGGGTGGGTGTATGTAGCTCATTAGACGTCTGATCGTGTAATGTTTGCAAAATGCTCTTGTGGGAACAAGGCGTTTCAAGCAATTATTATCCTACTGCAGGAGCTGGATACGAAAGAGGCAGAGGAGGGGGCCGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGCAGTGGAGGAAACCAGGCTTAG

mRNA sequence

ATGGATAGATACCAGAAGGTCGAGAAACCCAAACCCGAATCACCCATTAACGAAAATGAAATCCGAATCACTAGTCAAGGTGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGTCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGAAGAGAATATCACGATTGCATCAAGAAACTGCTATCAGCTCAGTTAGCATAACCGATGTATGGGAACCCATTGAGGAAGGTCTCGTACCGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACGTTATCCAATCGAGAGCTAAATAAAAATTCTCCAGGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACCACCACCACCCAGACAACCACGTGTTTATCACAATGCTGTCCATGAAGATCCATATGGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTATCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCACTACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGACAACTACCAAGGTGGACCTGGATATTATCAAGATAGTAACGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGAGCTGGATACGAAAGAGGCAGAGGAGGGGGCCGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGCAGTGGAGGAAACCAGGCTTAG

Coding sequence (CDS)

ATGGATAGATACCAGAAGGTCGAGAAACCCAAACCCGAATCACCCATTAACGAAAATGAAATCCGAATCACTAGTCAAGGTGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGTCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGAAGAGAATATCACGATTGCATCAAGAAACTGCTATCAGCTCAGTTAGCATAACCGATGTATGGGAACCCATTGAGGAAGGTCTCGTACCGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACGTTATCCAATCGAGAGCTAAATAAAAATTCTCCAGGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACCACCACCACCCAGACAACCACGTGTTTATCACAATGCTGTCCATGAAGATCCATATGGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTATCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCACTACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGACAACTACCAAGGTGGACCTGGATATTATCAAGATAGTAACGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGAGCTGGATACGAAAGAGGCAGAGGAGGGGGCCGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGCAGTGGAGGAAACCAGGCTTAG

Protein sequence

MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKNSPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRGWAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA*
Homology
BLAST of Chy4G075830 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 0

Query: 1   MDRYQK-------VEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAM 60
           M+ Y+K          P P+ P +  E+R+     IRN +  A   L+    R +V    
Sbjct: 1   MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60

Query: 61  GQAISKAVAIAEILKKRISRLHQETAISSVSITDVWEPI--EEGLVPVEMTRHVSMISIT 120
           G+A  KAV+ AEI+K+R+  LHQ T +  +   D W P   + GL P+ + RHV  + + 
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120

Query: 121 LSNRELNKNSPGYQAP 128
           LS   L+ N  GYQ P
Sbjct: 121 LSRDPLDPNECGYQPP 136

BLAST of Chy4G075830 vs. ExPASy Swiss-Prot
Match: Q9SL15 (Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.2e-05
Identity = 46/88 (52.27%), Postives = 48/88 (54.55%), Query Frame = 0

Query: 159 VHEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGP 218
           V  D  G G   G     G  +GG GNYQGG GNYQGG G+YQGG G YQGG   YQGG 
Sbjct: 37  VKPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGG 96

Query: 219 GYYQDSNGGYSNWGRGGGRSR-GWAYRG 246
           G YQ   G     G GG   R G  YRG
Sbjct: 97  GRYQGGGGRQGGGGSGGSYCRHGCCYRG 124

BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A5A7VGR8 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003370 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141
Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 278
           WAYRGAGYERGRGGGRGYGRGRGRMGGR RGSGGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 276

BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A1S3BYB0 (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141
Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 278
           WAYRGAGYERGRGGGRGYGRGRGRMGGR RGSGGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 276

BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A1S3CMY8 (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.5e-139
Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+ED YGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 278
           WAYRGAGYERGRGGGRGYGRGRGRMGGRTRG GGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 276

BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A1S3C001 (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138
Identity = 274/287 (95.47%), Postives = 275/287 (95.82%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYR----------GAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 278
           WAYR          GAGYERGRGGGRGYGRGRGRMGGR RGSGGNQA
Sbjct: 241 WAYRGVSSNYYPTAGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 286

BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A5A7UHR2 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00070 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 272/287 (94.77%), Postives = 273/287 (95.12%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+ED YGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYR----------GAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 278
           WAYR          GAGYERGRGGGRGYGRGRGRMGGRTRG GGNQA
Sbjct: 241 WAYRGVSSNYYPPAGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 286

BLAST of Chy4G075830 vs. NCBI nr
Match: XP_031737654.1 (protein FAM98A isoform X2 [Cucumis sativus])

HSP 1 Score: 513 bits (1322), Expect = 7.55e-183
Identity = 273/277 (98.56%), Postives = 276/277 (99.64%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
            GYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD+NGGYS+WGRGGGRSRG
Sbjct: 181 SGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNNGGYSSWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 277
           WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 277

BLAST of Chy4G075830 vs. NCBI nr
Match: XP_008454509.1 (PREDICTED: protein FAM98A-like isoform X2 [Cucumis melo] >KAA0066287.1 protein FAM98A-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 511 bits (1315), Expect = 8.49e-182
Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 277
           WAYRGAGYERGRGGGRGYGRGRGRMGGR RGSGGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 276

BLAST of Chy4G075830 vs. NCBI nr
Match: XP_031737627.1 (protein FAM98A isoform X2 [Cucumis sativus])

HSP 1 Score: 511 bits (1315), Expect = 8.81e-182
Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEK VREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKCVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD+NGGYS+WGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNNGGYSSWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 277
           WAYRGAGYERGRGGGRGYGRGRGRMGGR RGSGGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRARGSGGNQA 277

BLAST of Chy4G075830 vs. NCBI nr
Match: XP_031737653.1 (RNA-binding protein FUS isoform X1 [Cucumis sativus])

HSP 1 Score: 505 bits (1301), Expect = 1.73e-179
Identity = 273/287 (95.12%), Postives = 276/287 (96.17%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+EDPYGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
            GYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD+NGGYS+WGRGGGRSRG
Sbjct: 181 SGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDNNGGYSSWGRGGGRSRG 240

Query: 241 WAYRG----------AGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 277
           WAYRG          AGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA
Sbjct: 241 WAYRGVSSNYYPTAGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 287

BLAST of Chy4G075830 vs. NCBI nr
Match: XP_008465082.1 (PREDICTED: protein FAM98A-like isoform X2 [Cucumis melo])

HSP 1 Score: 504 bits (1299), Expect = 2.33e-179
Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSN ELNKN
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNGELNKN 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGR 180
           SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAV+ED YGQGRGRGRGRGRGWGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVNEDLYGQGRGRGRGRGRGWGR 180

Query: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRG 240
           GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD NGGYSNWGRGGGRSRG
Sbjct: 181 GGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQD-NGGYSNWGRGGGRSRG 240

Query: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA 277
           WAYRGAGYERGRGGGRGYGRGRGRMGGRTRG GGNQA
Sbjct: 241 WAYRGAGYERGRGGGRGYGRGRGRMGGRTRGGGGNQA 276

BLAST of Chy4G075830 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51
Identity = 164/321 (51.09%), Postives = 192/321 (59.81%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQ+V KPKPESPINENEIRITS+G IRNYI+YA++LLQEK V++IVLKAMGQAISK 
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAI+EILK +I  LHQ+ AISS+SITDVWEP EEGL PVE+TRHVSMISITLS  ELNK+
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRG--------- 180
           SPGYQAP   +Q K QY       QP   RQ R+ +NA  E+      G           
Sbjct: 121 SPGYQAPAQSDQSKPQY-------QPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETT 180

Query: 181 ----RGRGRG------------------------------WGRGGY-GNYQGGY-GNYQG 240
               + + +G                               GRGGY G   GGY G    
Sbjct: 181 KGVMKEKTKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRDD 240

Query: 241 GYGHYQG-GYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRGWAYRGAGYERGRGG 274
           GYG  +  GYG  +  +D Y GG     D  GG  + G GGGR+ G+  R  G+  GRGG
Sbjct: 241 GYGERRNDGYGERR--NDRYGGG---RDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGG 300

BLAST of Chy4G075830 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 165.6 bits (418), Expect = 5.6e-41
Identity = 154/331 (46.53%), Postives = 183/331 (55.29%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+V KPK ++PI+ NEIRITSQG  RNYITYA TLLQ+K   E+V KAMG+AI+K 
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V I E++K+RI  LHQ T+I S  ITD WEP EEGL+P+E TRHVSMI+ITLS  ELN +
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120

Query: 121 SPGYQAPHFVEQPKQ----QYNNQQPLPQPPPPRQPR-------------VYHNAVHED- 180
           S GYQ P  +E  K      Y  ++  P      + R              Y N  HED 
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHEDG 180

Query: 181 ------PYGQGRGRGRGR-GRGWGRGGYGN--------YQGGYG----------NYQGGY 240
                  YG+GRGRGRGR  RG GRGGY            GGYG          + +GGY
Sbjct: 181 GWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHRGYDDRGGY 240

Query: 241 GHYQGGYGHY-----QGGSDNYQGGPGY--YQDSNGGYSNWGRGGGRSRGWAYRGAGYE- 274
                G G Y     +GG D  QG  GY       GGY    +G G   G +    GY+ 
Sbjct: 241 DAPPQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDGPSQGRGGYDGPSQGRGGYDG 300

BLAST of Chy4G075830 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-40
Identity = 131/268 (48.88%), Postives = 162/268 (60.45%), Query Frame = 0

Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+VEKPK ++PI ENEIRITS G  RNYITYA  LLQE +  E++ KAMG+AI+K+
Sbjct: 1   MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V I E++K+RI  LHQ T+I S  ITD WEP EEGL  +E TRHVSMI+ITLS  +LN +
Sbjct: 61  VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120

Query: 121 SPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGR-GRGRGWG 180
           S GYQ P  +E  K       PL +        + +      P G+G  RGR GRGRG G
Sbjct: 121 SVGYQCPIPIEMVK-------PLAE--------IDYEGQDGSPRGRGGRRGRGGRGRGRG 180

Query: 181 RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSR 240
           RGG GN         GG G  +GG G+    ++   GG G     +G  +N    GG  +
Sbjct: 181 RGGRGNGPANVEYDDGGRG--RGGRGNGYVNNEYDDGGRGRGGRGSGYVNNEYNDGGMEQ 240

Query: 241 GWAYRGAGYERGRGGGRGYGRGRGRMGG 268
             +Y G G  RGRGGGRG GRGRG   G
Sbjct: 241 DRSY-GRGRGRGRGGGRG-GRGRGGYNG 249

BLAST of Chy4G075830 vs. TAIR 10
Match: AT2G05520.1 (glycine-rich protein 3 )

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-06
Identity = 46/88 (52.27%), Postives = 48/88 (54.55%), Query Frame = 0

Query: 159 VHEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGP 218
           V  D  G G   G     G  +GG GNYQGG GNYQGG G+YQGG G YQGG   YQGG 
Sbjct: 37  VKPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGG 96

Query: 219 GYYQDSNGGYSNWGRGGGRSR-GWAYRG 246
           G YQ   G     G GG   R G  YRG
Sbjct: 97  GRYQGGGGRQGGGGSGGSYCRHGCCYRG 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8N5L81.5e-1133.82Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25... [more]
Q9SL158.2e-0552.27Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7VGR86.3e-14198.92Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S3BYB06.3e-14198.92protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1[more]
A0A1S3CMY84.5e-13998.19protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1[more]
A0A1S3C0011.7e-13895.47protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1[more]
A0A5A7UHR21.2e-13694.77Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
Match NameE-valueIdentityDescription
XP_031737654.17.55e-18398.56protein FAM98A isoform X2 [Cucumis sativus][more]
XP_008454509.18.49e-18298.92PREDICTED: protein FAM98A-like isoform X2 [Cucumis melo] >KAA0066287.1 protein F... [more]
XP_031737627.18.81e-18298.19protein FAM98A isoform X2 [Cucumis sativus][more]
XP_031737653.11.73e-17995.12RNA-binding protein FUS isoform X1 [Cucumis sativus][more]
XP_008465082.12.33e-17998.19PREDICTED: protein FAM98A-like isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G07030.11.6e-5151.09Alba DNA/RNA-binding protein [more]
AT1G76010.15.6e-4146.53Alba DNA/RNA-binding protein [more]
AT1G20220.18.1e-4048.88Alba DNA/RNA-binding protein [more]
AT2G05520.15.8e-0652.27glycine-rich protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 14..117
e-value: 8.4E-34
score: 117.5
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 16..116
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 19..80
e-value: 2.7E-17
score: 62.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..177
NoneNo IPR availablePANTHERPTHR13516:SF3ALBA DNA/RNA-BINDING PROTEINcoord: 1..276
NoneNo IPR availablePANTHERPTHR13516RIBONUCLEASE P SUBUNIT P25coord: 1..276

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G075830.1Chy4G075830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding