Chy4G075830 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGATACCAGAAGGTCGAGAAACCCAAACCCGAATCACCCATTAACGAAAATGAAATCCGAATCACTAGTCAAGGTGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGTATATCTCCTCCTCATTCATTCAATCTCTTTTCTCTTTCACTTCCATCTCCTTAAATTCGACTTCCTCTTCCTGATTTTCTGCCAATGCTGTTTCTCTTCTCTACAACTTTCCTGTTTTTGTTTTTTGATTTTTTTTTTAATTTGGAAAAGTTTTAGTGTTTTATCGATTTGGGTATTTGTCGTTGGATGATTTTTTTTCTATTGTATTAGTATGTTAATGATGACTTTTCTGATCTGTTTTTGGGTCGTAATTAGTTTTACTGGATGTGCCTGCTGTTTTTACAATGAACAAATATTGGAGGATTCTAAGGACATAATGAACACACTCTAATTGATGACTGACTGACTATGGAGGACAGGGACTAACTACAAAACTCATTGAACTAGAACTATGCAGATAAGCAATAAAAACATTAGTCTCCAAGCTCTATATTTAACGTTTAAACATCGTGTAAGTTATTTTTTTTTATTTAATTTATAATGTGCCCACTACTTTGATGTCCTACTGTCATCTTTTCTAGAGATAGATGACGTTAGCTTTAATGCCTTGTTGCATCTCGTCTTCTTATTCTTCTCATTTTTTTTATCTTGTTCTTGTTATTTTTTAAGCACCTTTTTCTTCTGTGTATGTTGTTTGTTTGAATAATTGTCTATAGTGTTTTGGTTATCAGAAAAAACTGTAATACATAGAATATTGGTGTTCTTGGAACTTATTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGTCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGGTTAATTTTCCTTAAGACTACTTGTGCGTTTGAGTGCAAATATTGTGTATTTCATAATTCACAAGCCATGTGTATCCTCGAAACAGAAGAGAATATCACGATTGCATCAAGAAACTGCTATCAGCTCAGTTAGCATAACCGATGTATGGGAACCCATTGAGGAAGGTCTCGTACCGTAAGTTTTCTTAGTCTCTGCAATGAACGTTAATCGTACAACAAATAATTGAAAGCTTATTTGTGTTTTACTTTTAGTTAATTTGCTCTCACGCTATATGCATTGCTTGCAACTTCGTTGCATGTTCTATGGGTTTGTACTAAGTAGCCTAGTTCTTTAGATGTGCAAGAAATAACTTCTATCATGTCACACAGGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACGTTATCCAATCGAGAGCTAAATAAAAATTCTCCAGGGTAAGTTGTTTTTGGGAACTTTAAAATTTGGTATAAAATGTGGGATTTAGCTACTTTTCTTTCATATTTCATGCTTTGGTTTCTTCTGCGTGTATGATGACGAACTAATTTCTGTGGGTAGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACCACCACCACCCAGACAACCACGTGTTTATCACAATGCTGTCCATGAAGGTGATTTCAGCAACACTTTATTATTGGATTATGGAACTCTACCTTGTCTGGGATTTGACATGTTACTGCCACTTTGCAGATCCATATGGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTATCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCACTACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGACAACTACCAAGGTGGACCTGGATATTATCAAGGTGAATATTGAAGAGTCGAATATTTTCAATAGAAGTAATGCTTTAAAAGTTTCACTGTATTGCATTTGACTTGATATTGTTCTGGAGTGTGATTTTTAACTCTCGTGAGCTTTCTTCATCTTAGATAGTAACGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGTAAGTTTCTTTCTTTATGCACGGAAGTATGTTCTTGAGTTGACTGCAGGAATGTTTTGAATATAAACACAATACATTGAGAGTCTGGAAAGGCATTTGACTCATTGATTTATCTTCAAAGTTATAACTAGTAATTTAGGGTGGGTGTATGTAGCTCATTAGACGTCTGATCGTGTAATGTTTGCAAAATGCTCTTGTGGGAACAAGGCGTTTCAAGCAATTATTATCCTACTGCAGGAGCTGGATACGAAAGAGGCAGAGGAGGGGGCCGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGCAGTGGAGGAAACCAGGCTTAG ATGGATAGATACCAGAAGGTCGAGAAACCCAAACCCGAATCACCCATTAACGAAAATGAAATCCGAATCACTAGTCAAGGTGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGTCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGAAGAGAATATCACGATTGCATCAAGAAACTGCTATCAGCTCAGTTAGCATAACCGATGTATGGGAACCCATTGAGGAAGGTCTCGTACCGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACGTTATCCAATCGAGAGCTAAATAAAAATTCTCCAGGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACCACCACCACCCAGACAACCACGTGTTTATCACAATGCTGTCCATGAAGATCCATATGGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTATCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCACTACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGACAACTACCAAGGTGGACCTGGATATTATCAAGATAGTAACGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGAGCTGGATACGAAAGAGGCAGAGGAGGGGGCCGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGCAGTGGAGGAAACCAGGCTTAG ATGGATAGATACCAGAAGGTCGAGAAACCCAAACCCGAATCACCCATTAACGAAAATGAAATCCGAATCACTAGTCAAGGTGCCATTCGTAACTACATCACCTATGCTTCTACACTTCTTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGTCAGGCAATCAGTAAAGCAGTGGCTATTGCAGAAATTTTAAAGAAGAGAATATCACGATTGCATCAAGAAACTGCTATCAGCTCAGTTAGCATAACCGATGTATGGGAACCCATTGAGGAAGGTCTCGTACCGGTGGAGATGACTCGTCATGTCTCAATGATTTCAATTACGTTATCCAATCGAGAGCTAAATAAAAATTCTCCAGGGTATCAAGCTCCACACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAGCAGCCGCTGCCACAACCACCACCACCCAGACAACCACGTGTTTATCACAATGCTGTCCATGAAGATCCATATGGCCAAGGAAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGGAACTATCAAGGTGGATACGGCAACTACCAAGGTGGATATGGTCACTACCAAGGTGGTTATGGCCACTACCAAGGTGGATCTGACAACTACCAAGGTGGACCTGGATATTATCAAGATAGTAACGGTGGATACTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCTGGGCCTACCGTGGAGCTGGATACGAAAGAGGCAGAGGAGGGGGCCGAGGTTATGGCCGTGGACGGGGGCGAATGGGTGGTCGCACAAGGGGCAGTGGAGGAAACCAGGCTTAG MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKNSPGYQAPHFVEQPKQQYNNQQPLPQPPPPRQPRVYHNAVHEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDSNGGYSNWGRGGGRSRGWAYRGAGYERGRGGGRGYGRGRGRMGGRTRGSGGNQA* Homology
BLAST of Chy4G075830 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of Chy4G075830 vs. ExPASy Swiss-Prot
Match: Q9SL15 (Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.2e-05 Identity = 46/88 (52.27%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A5A7VGR8 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003370 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141 Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0
BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A1S3BYB0 (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141 Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0
BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A1S3CMY8 (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502782 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.5e-139 Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A1S3C001 (protein FAM98A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138 Identity = 274/287 (95.47%), Postives = 275/287 (95.82%), Query Frame = 0
BLAST of Chy4G075830 vs. ExPASy TrEMBL
Match: A0A5A7UHR2 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00070 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 272/287 (94.77%), Postives = 273/287 (95.12%), Query Frame = 0
BLAST of Chy4G075830 vs. NCBI nr
Match: XP_031737654.1 (protein FAM98A isoform X2 [Cucumis sativus]) HSP 1 Score: 513 bits (1322), Expect = 7.55e-183 Identity = 273/277 (98.56%), Postives = 276/277 (99.64%), Query Frame = 0
BLAST of Chy4G075830 vs. NCBI nr
Match: XP_008454509.1 (PREDICTED: protein FAM98A-like isoform X2 [Cucumis melo] >KAA0066287.1 protein FAM98A-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 511 bits (1315), Expect = 8.49e-182 Identity = 274/277 (98.92%), Postives = 275/277 (99.28%), Query Frame = 0
BLAST of Chy4G075830 vs. NCBI nr
Match: XP_031737627.1 (protein FAM98A isoform X2 [Cucumis sativus]) HSP 1 Score: 511 bits (1315), Expect = 8.81e-182 Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0
BLAST of Chy4G075830 vs. NCBI nr
Match: XP_031737653.1 (RNA-binding protein FUS isoform X1 [Cucumis sativus]) HSP 1 Score: 505 bits (1301), Expect = 1.73e-179 Identity = 273/287 (95.12%), Postives = 276/287 (96.17%), Query Frame = 0
BLAST of Chy4G075830 vs. NCBI nr
Match: XP_008465082.1 (PREDICTED: protein FAM98A-like isoform X2 [Cucumis melo]) HSP 1 Score: 504 bits (1299), Expect = 2.33e-179 Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Chy4G075830 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51 Identity = 164/321 (51.09%), Postives = 192/321 (59.81%), Query Frame = 0
BLAST of Chy4G075830 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 165.6 bits (418), Expect = 5.6e-41 Identity = 154/331 (46.53%), Postives = 183/331 (55.29%), Query Frame = 0
BLAST of Chy4G075830 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 161.8 bits (408), Expect = 8.1e-40 Identity = 131/268 (48.88%), Postives = 162/268 (60.45%), Query Frame = 0
BLAST of Chy4G075830 vs. TAIR 10
Match: AT2G05520.1 (glycine-rich protein 3 ) HSP 1 Score: 49.3 bits (116), Expect = 5.8e-06 Identity = 46/88 (52.27%), Postives = 48/88 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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