Homology
BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match:
O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 4.5e-72
Identity = 208/375 (55.47%), Postives = 248/375 (66.13%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPA-KLPSKPLPPAQAV 60
MAT+NPFDLL DDD EDP+QLA A K + PAK A KLPSKPLPPAQAV
Sbjct: 1 MATLNPFDLL-DDDAEDPSQLAVAIEKIDK-SKKSGQVSSLPAKSAPKLPSKPLPPAQAV 60
Query: 61 RESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPE---DCEKAA 120
RE++++ RGG GG GF RGR GG+NRD G NG+S Y P D K++
Sbjct: 61 REARSDAPRGG-GGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 120
Query: 121 -ERR-GYGAPRGSFRGP-------RRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDG 180
ERR G GAPRGSFRG RRGGF N E +GERPRR +ERRSGTGRG++FKRDG
Sbjct: 121 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 180
Query: 181 AGRRNWGAPGDENAPDVEELV-AENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPE 240
+GR NWG PG+E A + E + E EK+V + + D V D NK + V EEKEPE
Sbjct: 181 SGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTVV---EEKEPE 240
Query: 241 DKEMTLKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKKTNDEIFAKLGTDKDK 300
DKEMTL EYEK+ EE +K L + +VD ++ E+MQQLS+KK+NDEIF KLG+DKDK
Sbjct: 241 DKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDK 300
Query: 301 RKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSN--RMNVAA 359
RKD DKEE+AKK+V+I EFLKPAEG YY G GRGRG RGG ++G + N AA
Sbjct: 301 RKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAA 355
BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match:
Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 4.4e-67
Identity = 180/303 (59.41%), Postives = 217/303 (71.62%), Query Frame = 0
Query: 69 GGRGGGRGFGRGR--GGGGGFNRDSANNEN--GGRNGFSDRYQTPEDCE--KAAERR-GY 128
GGRGG RG GRGR G G GFN++SA++EN G NGFS RY+ ED E K +ERR GY
Sbjct: 3 GGRGGPRGGGRGRGPGRGRGFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGY 62
Query: 129 GAPRGSFRGPRRGGFGNGEAE--EGERPRRVYERRSGTGRGNEF-KRDGAGRRNWGAPGD 188
G PRG F G RRGGF NG+A EGERPRRV++RRSGTGRGNE+ KR+G+GR NWG P D
Sbjct: 63 GGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPAD 122
Query: 189 ENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKL 248
+ A + E V + EK V E++ G++ D NK + EPEEKEPE+KEMTL+EYEKL
Sbjct: 123 DIAQETEVPVNDGEKIVEAEKEAGQEE-AEDTNK-DSTAAEPEEKEPEEKEMTLEEYEKL 182
Query: 249 REESRK--LLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERA 308
EE RK L K E RK +D+ELE+MQ LS+KK +DEIF KLG++K+KRK+A E+A
Sbjct: 183 MEEKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAV---EKA 242
Query: 309 KKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNG-SNRMNVAAPSIEDPGQFPSL 359
+K+ +I EFLKPAEGE Y GGRGRG GRG RGGF G + +APSIED GQFPSL
Sbjct: 243 RKTQSINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGGGVGGNKSFSAPSIEDVGQFPSL 299
BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match:
Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 6.1e-61
Identity = 187/367 (50.95%), Postives = 232/367 (63.22%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MA++NPFDLL DD EDP+QLA A +KA A QP K AK P+KP PP+QAVR
Sbjct: 1 MASLNPFDLL-GDDAEDPSQLAVALSQ----KVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60
Query: 61 ESKN--ENSRGGRGGGRGFGRGRGGGGGFNRDSANNE-NGGRNGFSDRYQTP-EDCEKAA 120
ES+N + RGG GG GF RGR G GG+NRD+ NN+ G NGFS Y+ P ED + A+
Sbjct: 61 ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120
Query: 121 ERRGYGAPR--GSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
G R G GPRRGG NGE+ + ERP R Y+R S TG G KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180
Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPED---KEMT 240
D+ P EE E EK+ E+Q GED K E +E +KE E+ +EMT
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGEDE--TPEAKKELTAEEKAQKEAEEAEAREMT 240
Query: 241 LKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKK-TNDEIFAKLGTDKDKRKDA 300
L+EYEK+ EE +K L T+V + +VD ++ E+MQQLS+KK T++EIF KLG+DK+KRKDA
Sbjct: 241 LEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDA 300
Query: 301 ADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGR-GRGSRGGFNNGSNRMNVAAPSIED 356
E+AKKS++I EFLKPA+G+RY GG RGR GRG RG N AAP+I D
Sbjct: 301 T---EKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIGD 356
BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match:
O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 180/376 (47.87%), Postives = 231/376 (61.44%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MA++NPFDLL DDD EDP+Q+ ++ PL K AP Q AK K+P+KP PP+QAVR
Sbjct: 1 MASVNPFDLL-DDDAEDPSQIV----ASKPL---KVVAPVQTAKSGKMPTKPPPPSQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNEN-GGRNGFSDRYQTPEDCEKAAERR 120
E++N GGRG GRG GRGG GG NRDS NN+ NG+ Y+ E+ + A RR
Sbjct: 61 EARNAPG-GGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGA--RR 120
Query: 121 GYGAPRGSFRGPRRGGFGN-GEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGD 180
G P G +RG RRG + N G++ + ERPR+ Y+R S T GNE KRDGAGR NWG D
Sbjct: 121 --GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQD 180
Query: 181 ENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKL 240
+ P EE A +KN+ E+Q GE N E E E++PEDKEMTL+EYEK+
Sbjct: 181 DITPVTEESTAVVDKNLTVEKQDGEGEATDAKN---ETPAEKAEEKPEDKEMTLEEYEKV 240
Query: 241 REESRKLLAKTEVRKAEVD-EELENMQQLSSKKT-NDEIFAKLGTDKDKRKDAADKEERA 300
EE +K L T+V + +VD + E MQQLSSKK+ NDE+F KLGT+KDKR ++EE+
Sbjct: 241 LEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKT 300
Query: 301 KKSVTITEFLKPAEGERYYNPGG--RGRGRGRGSR-------------GGFN--NGSNRM 356
+KS++I EFLKPA+G+ YY P G +G GRG R GG N +G
Sbjct: 301 RKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAA 358
BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match:
A0A0A0LKF6 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914560 PE=4 SV=1)
HSP 1 Score: 634.0 bits (1634), Expect = 3.7e-178
Identity = 347/358 (96.93%), Postives = 349/358 (97.49%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQLASAHRSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
ESKN+N RGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPED EKAAERRG
Sbjct: 61 ESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERRG 120
Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
YGAPRGSFRGPRR GF NGEAEEGERPRRVYERRSGTGRGNEFKR+GAGRRNWGAPGDEN
Sbjct: 121 YGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDEN 180
Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
APDVEE VAENEKNVAPEQQLGED VV DNNK EEAVKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV
Sbjct: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 359
TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match:
A0A1S3CPW2 (plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103503456 PE=4 SV=1)
HSP 1 Score: 624.8 bits (1610), Expect = 2.3e-175
Identity = 348/359 (96.94%), Postives = 348/359 (96.94%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGR-GGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERR 120
ESKNENSRGGRGGGRGFGRGR GGGGGFNRDSANNEN GRNGFSDRYQTPED EKAAERR
Sbjct: 61 ESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENSGRNGFSDRYQTPEDGEKAAERR 120
Query: 121 GYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180
GYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180
Query: 181 NAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240
NAPDVEE VAENEKNVAPEQQLGED V DNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDG-VDDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240
Query: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKS 300
EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEERAKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERAKKS 300
Query: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 359
VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match:
A0A6J1EUM3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111438060 PE=4 SV=1)
HSP 1 Score: 570.1 bits (1468), Expect = 6.6e-159
Identity = 329/364 (90.38%), Postives = 337/364 (92.58%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
ESKNENSR GRGGGRGFGRGR GGGGFNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61 ESKNENSR-GRGGGRGFGRGR-GGGGFNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120
Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
YG PRGSFRGPRRGGF NGE EEGE+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180
Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
APDVEE VAENEKNVAPEQQLGED+VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNV----AAPSIEDPGQFPSL 359
TITEFLKPAEGERYYNPGGRGRGRGR GSRGGFNNGSNRMNV AAPSIED GQFPSL
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFPSL 360
BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match:
A0A5A7TA70 (Plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00150 PE=4 SV=1)
HSP 1 Score: 564.3 bits (1453), Expect = 3.6e-157
Identity = 321/364 (88.19%), Postives = 322/364 (88.46%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQA
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQA-- 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNR------DSANNENGGRNGFSDRYQTPEDCEK 120
GGF+ DSANNENGGRNGFSDRYQTPED EK
Sbjct: 61 ------------------------GGFSSLLLLVLDSANNENGGRNGFSDRYQTPEDGEK 120
Query: 121 AAERRGYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
AAERRGYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG
Sbjct: 121 AAERRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKE 240
APGDENAPDVEE VAENEKNVAPEQQLGED V DNNKAEEAVKEPEEKEPEDKEMTLKE
Sbjct: 181 APGDENAPDVEEPVAENEKNVAPEQQLGEDG-VDDNNKAEEAVKEPEEKEPEDKEMTLKE 240
Query: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEE 300
YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEE
Sbjct: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEE 300
Query: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 359
RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS
Sbjct: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 337
BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match:
A0A6J1I4B3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111470534 PE=4 SV=1)
HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 325/363 (89.53%), Postives = 332/363 (91.46%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
ESKNENSR GRGGGRGFGRGR GGGGFNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61 ESKNENSR-GRGGGRGFGRGR-GGGGFNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120
Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
YG PRGSFRGPRRGGF NGE EE E+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEAEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180
Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
APDVE VAENEKNVAPEQQLGED VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEAPVAENEKNVAPEQQLGEDGVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD DKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIVDKEEKAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNV---AAPSIEDPGQFPSL- 359
TITEFLKP EGERYYNPGGRGRGRGR GSRGGFNNGSNRMNV AAPSIED GQFPSL
Sbjct: 301 TITEFLKPTEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAPSIEDQGQFPSLM 360
BLAST of Chy4G067290 vs. NCBI nr
Match:
XP_004148350.1 (RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN60476.1 hypothetical protein Csa_001243 [Cucumis sativus])
HSP 1 Score: 631 bits (1627), Expect = 1.29e-226
Identity = 347/358 (96.93%), Postives = 349/358 (97.49%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQLASAHRSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
ESKN+N RGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPED EKAAERRG
Sbjct: 61 ESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERRG 120
Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
YGAPRGSFRGPRR GF NGEAEEGERPRRVYERRSGTGRGNEFKR+GAGRRNWGAPGDEN
Sbjct: 121 YGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDEN 180
Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
APDVEE VAENEKNVAPEQQLGED VV DNNK EEAVKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV
Sbjct: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
BLAST of Chy4G067290 vs. NCBI nr
Match:
XP_008465866.1 (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])
HSP 1 Score: 622 bits (1603), Expect = 5.85e-223
Identity = 348/359 (96.94%), Postives = 348/359 (96.94%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGG-FNRDSANNENGGRNGFSDRYQTPEDCEKAAERR 120
ESKNENSRGGRGGGRGFGRGRGGGGG FNRDSANNEN GRNGFSDRYQTPED EKAAERR
Sbjct: 61 ESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENSGRNGFSDRYQTPEDGEKAAERR 120
Query: 121 GYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180
GYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180
Query: 181 NAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240
NAPDVEE VAENEKNVAPEQQLGED V DNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDGVD-DNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240
Query: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKS 300
EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEERAKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERAKKS 300
Query: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
BLAST of Chy4G067290 vs. NCBI nr
Match:
XP_022931786.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])
HSP 1 Score: 567 bits (1461), Expect = 2.76e-201
Identity = 329/364 (90.38%), Postives = 337/364 (92.58%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
ESKNENSRG RGGGRGFGRGRGGGG FNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61 ESKNENSRG-RGGGRGFGRGRGGGG-FNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120
Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
YG PRGSFRGPRRGGF NGE EEGE+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180
Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
APDVEE VAENEKNVAPEQQLGED+VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRG-SRGGFNNGSNRMNVAA----PSIEDPGQFPSL 358
TITEFLKPAEGERYYNPGGRGRGRGRG SRGGFNNGSNRMNVAA PSIED GQFPSL
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFPSL 360
BLAST of Chy4G067290 vs. NCBI nr
Match:
KAG6571794.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 566 bits (1460), Expect = 4.07e-201
Identity = 329/365 (90.14%), Postives = 337/365 (92.33%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
ESKNENSRG RGGGRGFGRGRGGGG FNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61 ESKNENSRG-RGGGRGFGRGRGGGG-FNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120
Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
YG PRGSFRGPRRGGF NGE EEGE+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180
Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
APDVEE VAENEKNVAPEQQLGED+VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240
Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSV 300
Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRG-SRGGFNNGSNRMNVAA-----PSIEDPGQFPS 358
TITEFLKPAEGERYYNPGGRGRGRGRG SRGGFNNGSNRMNVAA PSIED GQFPS
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAAPSIEDQGQFPS 360
BLAST of Chy4G067290 vs. NCBI nr
Match:
KAA0038491.1 (plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 561 bits (1445), Expect = 3.13e-199
Identity = 321/364 (88.19%), Postives = 322/364 (88.46%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQA
Sbjct: 1 MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQA-- 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNR------DSANNENGGRNGFSDRYQTPEDCEK 120
GGF+ DSANNENGGRNGFSDRYQTPED EK
Sbjct: 61 ------------------------GGFSSLLLLVLDSANNENGGRNGFSDRYQTPEDGEK 120
Query: 121 AAERRGYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
AAERRGYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG
Sbjct: 121 AAERRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKE 240
APGDENAPDVEE VAENEKNVAPEQQLGED V DNNKAEEAVKEPEEKEPEDKEMTLKE
Sbjct: 181 APGDENAPDVEEPVAENEKNVAPEQQLGEDGVD-DNNKAEEAVKEPEEKEPEDKEMTLKE 240
Query: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEE 300
YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEE
Sbjct: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEE 300
Query: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 358
RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS
Sbjct: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 337
BLAST of Chy4G067290 vs. TAIR 10
Match:
AT4G16830.1 (Hyaluronan / mRNA binding family )
HSP 1 Score: 273.1 bits (697), Expect = 3.2e-73
Identity = 208/375 (55.47%), Postives = 248/375 (66.13%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPA-KLPSKPLPPAQAV 60
MAT+NPFDLL DDD EDP+QLA A K + PAK A KLPSKPLPPAQAV
Sbjct: 1 MATLNPFDLL-DDDAEDPSQLAVAIEKIDK-SKKSGQVSSLPAKSAPKLPSKPLPPAQAV 60
Query: 61 RESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPE---DCEKAA 120
RE++++ RGG GG GF RGR GG+NRD G NG+S Y P D K++
Sbjct: 61 REARSDAPRGG-GGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 120
Query: 121 -ERR-GYGAPRGSFRGP-------RRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDG 180
ERR G GAPRGSFRG RRGGF N E +GERPRR +ERRSGTGRG++FKRDG
Sbjct: 121 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 180
Query: 181 AGRRNWGAPGDENAPDVEELV-AENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPE 240
+GR NWG PG+E A + E + E EK+V + + D V D NK + V EEKEPE
Sbjct: 181 SGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTVV---EEKEPE 240
Query: 241 DKEMTLKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKKTNDEIFAKLGTDKDK 300
DKEMTL EYEK+ EE +K L + +VD ++ E+MQQLS+KK+NDEIF KLG+DKDK
Sbjct: 241 DKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDK 300
Query: 301 RKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSN--RMNVAA 359
RKD DKEE+AKK+V+I EFLKPAEG YY G GRGRG RGG ++G + N AA
Sbjct: 301 RKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAA 355
BLAST of Chy4G067290 vs. TAIR 10
Match:
AT5G47210.1 (Hyaluronan / mRNA binding family )
HSP 1 Score: 236.1 bits (601), Expect = 4.4e-62
Identity = 187/367 (50.95%), Postives = 232/367 (63.22%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MA++NPFDLL DD EDP+QLA A +KA A QP K AK P+KP PP+QAVR
Sbjct: 1 MASLNPFDLL-GDDAEDPSQLAVALSQ----KVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60
Query: 61 ESKN--ENSRGGRGGGRGFGRGRGGGGGFNRDSANNE-NGGRNGFSDRYQTP-EDCEKAA 120
ES+N + RGG GG GF RGR G GG+NRD+ NN+ G NGFS Y+ P ED + A+
Sbjct: 61 ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120
Query: 121 ERRGYGAPR--GSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
G R G GPRRGG NGE+ + ERP R Y+R S TG G KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180
Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPED---KEMT 240
D+ P EE E EK+ E+Q GED K E +E +KE E+ +EMT
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGEDE--TPEAKKELTAEEKAQKEAEEAEAREMT 240
Query: 241 LKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKK-TNDEIFAKLGTDKDKRKDA 300
L+EYEK+ EE +K L T+V + +VD ++ E+MQQLS+KK T++EIF KLG+DK+KRKDA
Sbjct: 241 LEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDA 300
Query: 301 ADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGR-GRGSRGGFNNGSNRMNVAAPSIED 356
E+AKKS++I EFLKPA+G+RY GG RGR GRG RG N AAP+I D
Sbjct: 301 T---EKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIGD 356
BLAST of Chy4G067290 vs. TAIR 10
Match:
AT4G16830.3 (Hyaluronan / mRNA binding family )
HSP 1 Score: 230.7 bits (587), Expect = 1.8e-60
Identity = 172/316 (54.43%), Postives = 209/316 (66.14%), Query Frame = 0
Query: 59 VRESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPE---DCEKA 118
VRE++++ RGG GG GF RGR GG+NRD G NG+S Y P D K+
Sbjct: 48 VREARSDAPRGG-GGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKS 107
Query: 119 A-ERR-GYGAPRGSFRGP-------RRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRD 178
+ ERR G GAPRGSFRG RRGGF N E +GERPRR +ERRSGTGRG++FKRD
Sbjct: 108 SYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRD 167
Query: 179 GAGRRNWGAPGDENAPDVEELV-AENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEP 238
G+GR NWG PG+E A + E + E EK+V + + D V D NK + V EEKEP
Sbjct: 168 GSGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTVV---EEKEP 227
Query: 239 EDKEMTLKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKKTNDEIFAKLGTDKD 298
EDKEMTL EYEK+ EE +K L + +VD ++ E+MQQLS+KK+NDEIF KLG+DKD
Sbjct: 228 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 287
Query: 299 KRKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSN--RMNVA 358
KRKD DKEE+AKK+V+I EFLKPAEG YY G GRGRG RGG ++G + N A
Sbjct: 288 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEA 345
BLAST of Chy4G067290 vs. TAIR 10
Match:
AT4G17520.1 (Hyaluronan / mRNA binding family )
HSP 1 Score: 221.9 bits (564), Expect = 8.5e-58
Identity = 180/376 (47.87%), Postives = 231/376 (61.44%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MA++NPFDLL DDD EDP+Q+ ++ PL K AP Q AK K+P+KP PP+QAVR
Sbjct: 1 MASVNPFDLL-DDDAEDPSQIV----ASKPL---KVVAPVQTAKSGKMPTKPPPPSQAVR 60
Query: 61 ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNEN-GGRNGFSDRYQTPEDCEKAAERR 120
E++N GGRG GRG GRGG GG NRDS NN+ NG+ Y+ E+ + A RR
Sbjct: 61 EARNAPG-GGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGA--RR 120
Query: 121 GYGAPRGSFRGPRRGGFGN-GEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGD 180
G P G +RG RRG + N G++ + ERPR+ Y+R S T GNE KRDGAGR NWG D
Sbjct: 121 --GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQD 180
Query: 181 ENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKL 240
+ P EE A +KN+ E+Q GE N E E E++PEDKEMTL+EYEK+
Sbjct: 181 DITPVTEESTAVVDKNLTVEKQDGEGEATDAKN---ETPAEKAEEKPEDKEMTLEEYEKV 240
Query: 241 REESRKLLAKTEVRKAEVD-EELENMQQLSSKKT-NDEIFAKLGTDKDKRKDAADKEERA 300
EE +K L T+V + +VD + E MQQLSSKK+ NDE+F KLGT+KDKR ++EE+
Sbjct: 241 LEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKT 300
Query: 301 KKSVTITEFLKPAEGERYYNPGG--RGRGRGRGSR-------------GGFN--NGSNRM 356
+KS++I EFLKPA+G+ YY P G +G GRG R GG N +G
Sbjct: 301 RKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAA 358
BLAST of Chy4G067290 vs. TAIR 10
Match:
AT5G47210.3 (Hyaluronan / mRNA binding family )
HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 152/306 (49.67%), Postives = 194/306 (63.40%), Query Frame = 0
Query: 1 MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
MA++NPFDLL DD EDP+QLA A +KA A QP K AK P+KP PP+QAVR
Sbjct: 1 MASLNPFDLL-GDDAEDPSQLAVALSQ----KVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60
Query: 61 ESKN--ENSRGGRGGGRGFGRGRGGGGGFNRDSANNE-NGGRNGFSDRYQTP-EDCEKAA 120
ES+N + RGG GG GF RGR G GG+NRD+ NN+ G NGFS Y+ P ED + A+
Sbjct: 61 ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120
Query: 121 ERRGYGAPR--GSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
G R G GPRRGG NGE+ + ERP R Y+R S TG G KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180
Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPED---KEMT 240
D+ P EE E EK+ E+Q GED K E +E +KE E+ +EMT
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGEDE--TPEAKKELTAEEKAQKEAEEAEAREMT 240
Query: 241 LKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKK-TNDEIFAKLGTDKDKRKDA 296
L+EYEK+ EE +K L T+V + +VD ++ E+MQQLS+KK T++EIF KLG+DK+KRKDA
Sbjct: 241 LEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDA 298
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O23523 | 4.5e-72 | 55.47 | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG... | [more] |
Q9SQ56 | 4.4e-67 | 59.41 | RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409... | [more] |
Q9LVT8 | 6.1e-61 | 50.95 | RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG... | [more] |
O23593 | 1.2e-56 | 47.87 | RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LKF6 | 3.7e-178 | 96.93 | HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914... | [more] |
A0A1S3CPW2 | 2.3e-175 | 96.94 | plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=36... | [more] |
A0A6J1EUM3 | 6.6e-159 | 90.38 | RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A5A7TA70 | 3.6e-157 | 88.19 | Plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo var. ... | [more] |
A0A6J1I4B3 | 1.4e-156 | 89.53 | RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |
XP_004148350.1 | 1.29e-226 | 96.93 | RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN60476.1 hypothet... | [more] |
XP_008465866.1 | 5.85e-223 | 96.94 | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m... | [more] |
XP_022931786.1 | 2.76e-201 | 90.38 | RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata] | [more] |
KAG6571794.1 | 4.07e-201 | 90.14 | RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp... | [more] |
KAA0038491.1 | 3.13e-199 | 88.19 | plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo var. ma... | [more] |