Chy4G067290 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G067290
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	chrH04: 141204 .. 144095 (-)
RNA-Seq Expression	Chy4G067290
Synteny	Chy4G067290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCATGAACCCCTTTGATCTCTTGGTCGACGACGACAACGAGGACCCTAATCAGCTTGCTTCTGCTCACCGCTCCGCTCCTCCCCTCCCCTCCAAGAAAGCCCCTGCTCCTGCCCAGCCTGCCAAACCGGCTAAGCTCCCTTCCAAGCCCCTCCCTCCTGCTCAGGCTGGTGGGTTTTCTTCCTTCTTCTTTCTTCTTTTCTGTTTTATCTGAATGTGGACTTTTAGAGTTTTAGAAGCCATTAACTTTTCAATACCTTAGCCTCTTATTTTGCCATCTTATGTTCTTTTTGGGACTTCTGGCTATGAGTTGTAACTTGTATTAATGCTCGACTTCATGTATTGTGAAGTTCTGTTGTTTGTTGTTTGTTCTTTTTTTTAGTTCAACTGATTGTTTGAGATAAATGTATGGTGCTTTTCTGCCTTAAGATTGATTGCTTTGTTCTTCCTGCTGCTGTTAAAACCACTCGTCCTCTCATTTTAATTTGAATATTAGTGTCTTGATACTGTTTTTATTTTCAATTTATGACCTATTTGCTTTGACAATGATTTGGAACGAATATTAGTAATTCTTATTATTCATCCTGACGGTCTTTTTGTAAATGCTATGACTGAAGATAATTACTTTGTTGTGGATATCATTTAAAAGAAGGTCCTTGATGCTTAAATTTCCCATGCTATATAACTCCCTGGGTGAAGTAGGTACATCTGAACAGGTATTCGCATAAGAAGTCAATATTGCTGATTCTTTCTATTAGTATGATGTTGAAAGTTAGAATTGTGATACTGATTTTATGAGTCTTAAAAAGCTTCCGTGTTCGGTAATCTATGAATGTTATCTTGTTGAACACTTTTTCTTTTTTCTTATTAATATGGATATGATTTTCTTTAAAATGATCTAACTTTGGGTATTGTTATCATATTTATTTATGACCAGTAAGGGAGTCGAAGAATGAAAATAGCCGTGGTGGTCGTGGAGGTGGACGTGGCTTTGGGCGAGGGCGTGGTGGTGGTGGAGGATTCAACAGAGACTCAGCCAACAATGAAAATGGTGGCCGGAATGGATTCTCCGATCGTTACCAGACACCTGAAGATTGTGAAAAGGCAGCTGAAAGGCGTGGTTATGGTGCTCCCCGTGGATCTTTCCGTGGTCCTCGTCGTGGAGGCTTTGGCAATGGTGAAGCTGAAGAAGGGGAACGACCGCGAAGAGTATATGAACGCCGCAGTGGAACTGGGCGTGGGTTAGTACATTTTTTTACTGGGATATCTAGTTTTCAATTTGATCAATTTATCTCAAAATGTAATTTTATAGTTATCTTACCCTATGCTGGTTGTTTTGGTTTCAGAAACGAGTTTAAGCGTGATGGGGCTGGTCGTAGGAACTGGGGTGCACCTGGTGATGAAAATGCCCCGTAAGTTTACTTGTCCAATTGTGACACATTAACTGATTTTATGATATAGCTTTGACATTTACTTGGACTTGTGGATATAAGGGATGTGGAAGAGCTTGTTGCTGAAAACGAGAAGAATGTTGCTCCAGAGCAACAATTGGGAGAGGATGCGGTTGTCGTTGATAACAACAAAGCCGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAGCCTGAGGATAAGGTAACAGCCCTTATTTTTTTTAATATTGATATATGGTTAAGTCTGGCATTTCAATTGGCTATATTCACTTCAACTTTTTTTTTACAGGAGATGACCCTCAAAGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAACTGCTGGCAAAGACTGAGGTGAGGAAAGCCGAGGTGGATGAGGAATTAGAGAACATGCAGCAGCTTTCCAGCAAGAAGACCAATGATGAAATCTTTGCCAAATTGGTGAGAACTTATCTCCTGGCAGTATTACAATTCCATTTTTAGCCCTTTGGTTGTTAACCCTATAGAATTTTTGGTCAGGGTACTGATAAGGATAAGCGCAAGGATGCTGCTGACAAGGAGGAGAGAGCTAAGAAAGTATGTATTGTTCTTTGGGATTCATTTCTGCCTGATCTTTATGTAACTGCATTTTAGAAATTAACCTATAATTTTATTTTGTTTTTTGAAAATTGTGTTACCTTGTTAATTGAAATTTTCAATTTTGGTTAAAATTTTCTTGCCCTTTTATTTTCATATCATGCAATATACAGTAGAGCTTAGCCACCTTTGTAGTGTTGGTTTCTTGTTTGCTTATTAGAGTGTATAATGTGTGGAACGACCTCACTTGAACAGTTATGGTTCTATAGATTATGTACAAGGGTATTATTCCGTTCTTGTTGGTTTCTTGTTGTTTGCTTATTAGACTATTCTATAGACAATATTTTACTTAGTTGGTCCACCTTTTTGTAAGTGGTGTGGCTTGGTGGGTTGGTTTTTTTTTTGTGTCTGTGTTCTTTCATTTTTATCTCATTGAAAGTAGTTGATTTCATAAAAAAAAAATGATGTACAACTGTATCATTCAGTCCTAGAGCCTAATGTTGTGAAGTTCGGTTTTCTTATTTATTATATAAGCACGTAGTCTACCGTGTATAAGATGTTTCTATTGGTGTTTGTTCTATTACTGTGGTTAAACCCAGCCAGGGCTATTACAGTGAGTGAAACATGTGCAACGCTTGTTCTGTCTACACTTGTTATATTACTGAGTTCTAATTAAAGTAACTGTTTTTGGTTGTAGTCTGTGACTATTACCGAGTTCCTGAAACCTGCGGAAGGTGAGAGGTACTACAACCCTGGCGGTCGTGGTAGAGGCCGTGGGCGAGGCTCTAGAGGTGGGTTCAATAACGGAAGCAACAGAATGAATGTGGCAGCCCCCTCCATTGAAGATCCCGGGCAGTTTCCTTCGTTGAGTGCCAAGTGA

mRNA sequence

ATGGCAACCATGAACCCCTTTGATCTCTTGGTCGACGACGACAACGAGGACCCTAATCAGCTTGCTTCTGCTCACCGCTCCGCTCCTCCCCTCCCCTCCAAGAAAGCCCCTGCTCCTGCCCAGCCTGCCAAACCGGCTAAGCTCCCTTCCAAGCCCCTCCCTCCTGCTCAGGCTGTAAGGGAGTCGAAGAATGAAAATAGCCGTGGTGGTCGTGGAGGTGGACGTGGCTTTGGGCGAGGGCGTGGTGGTGGTGGAGGATTCAACAGAGACTCAGCCAACAATGAAAATGGTGGCCGGAATGGATTCTCCGATCGTTACCAGACACCTGAAGATTGTGAAAAGGCAGCTGAAAGGCGTGGTTATGGTGCTCCCCGTGGATCTTTCCGTGGTCCTCGTCGTGGAGGCTTTGGCAATGGTGAAGCTGAAGAAGGGGAACGACCGCGAAGAGTATATGAACGCCGCAGTGGAACTGGGCGTGGAAACGAGTTTAAGCGTGATGGGGCTGGTCGTAGGAACTGGGGTGCACCTGGTGATGAAAATGCCCCGGATGTGGAAGAGCTTGTTGCTGAAAACGAGAAGAATGTTGCTCCAGAGCAACAATTGGGAGAGGATGCGGTTGTCGTTGATAACAACAAAGCCGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAGCCTGAGGATAAGGAGATGACCCTCAAAGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAACTGCTGGCAAAGACTGAGGTGAGGAAAGCCGAGGTGGATGAGGAATTAGAGAACATGCAGCAGCTTTCCAGCAAGAAGACCAATGATGAAATCTTTGCCAAATTGGGTACTGATAAGGATAAGCGCAAGGATGCTGCTGACAAGGAGGAGAGAGCTAAGAAATCTGTGACTATTACCGAGTTCCTGAAACCTGCGGAAGGTGAGAGGTACTACAACCCTGGCGGTCGTGGTAGAGGCCGTGGGCGAGGCTCTAGAGGTGGGTTCAATAACGGAAGCAACAGAATGAATGTGGCAGCCCCCTCCATTGAAGATCCCGGGCAGTTTCCTTCGTTGAGTGCCAAGTGA

Coding sequence (CDS)

ATGGCAACCATGAACCCCTTTGATCTCTTGGTCGACGACGACAACGAGGACCCTAATCAGCTTGCTTCTGCTCACCGCTCCGCTCCTCCCCTCCCCTCCAAGAAAGCCCCTGCTCCTGCCCAGCCTGCCAAACCGGCTAAGCTCCCTTCCAAGCCCCTCCCTCCTGCTCAGGCTGTAAGGGAGTCGAAGAATGAAAATAGCCGTGGTGGTCGTGGAGGTGGACGTGGCTTTGGGCGAGGGCGTGGTGGTGGTGGAGGATTCAACAGAGACTCAGCCAACAATGAAAATGGTGGCCGGAATGGATTCTCCGATCGTTACCAGACACCTGAAGATTGTGAAAAGGCAGCTGAAAGGCGTGGTTATGGTGCTCCCCGTGGATCTTTCCGTGGTCCTCGTCGTGGAGGCTTTGGCAATGGTGAAGCTGAAGAAGGGGAACGACCGCGAAGAGTATATGAACGCCGCAGTGGAACTGGGCGTGGAAACGAGTTTAAGCGTGATGGGGCTGGTCGTAGGAACTGGGGTGCACCTGGTGATGAAAATGCCCCGGATGTGGAAGAGCTTGTTGCTGAAAACGAGAAGAATGTTGCTCCAGAGCAACAATTGGGAGAGGATGCGGTTGTCGTTGATAACAACAAAGCCGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAGCCTGAGGATAAGGAGATGACCCTCAAAGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAACTGCTGGCAAAGACTGAGGTGAGGAAAGCCGAGGTGGATGAGGAATTAGAGAACATGCAGCAGCTTTCCAGCAAGAAGACCAATGATGAAATCTTTGCCAAATTGGGTACTGATAAGGATAAGCGCAAGGATGCTGCTGACAAGGAGGAGAGAGCTAAGAAATCTGTGACTATTACCGAGTTCCTGAAACCTGCGGAAGGTGAGAGGTACTACAACCCTGGCGGTCGTGGTAGAGGCCGTGGGCGAGGCTCTAGAGGTGGGTTCAATAACGGAAGCAACAGAATGAATGTGGCAGCCCCCTCCATTGAAGATCCCGGGCAGTTTCCTTCGTTGAGTGCCAAGTGA

Protein sequence

MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVRESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRGYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK*

Homology

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BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.5e-72
Identity = 208/375 (55.47%), Postives = 248/375 (66.13%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPA-KLPSKPLPPAQAV 60
           MAT+NPFDLL DDD EDP+QLA A         K     + PAK A KLPSKPLPPAQAV
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDK-SKKSGQVSSLPAKSAPKLPSKPLPPAQAV 60

Query: 61  RESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPE---DCEKAA 120
           RE++++  RGG GG  GF RGR   GG+NRD       G NG+S  Y  P    D  K++
Sbjct: 61  REARSDAPRGG-GGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 120

Query: 121 -ERR-GYGAPRGSFRGP-------RRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDG 180
            ERR G GAPRGSFRG        RRGGF N E  +GERPRR +ERRSGTGRG++FKRDG
Sbjct: 121 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 180

Query: 181 AGRRNWGAPGDENAPDVEELV-AENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPE 240
           +GR NWG PG+E A + E +   E EK+V  +  +  D V  D NK +  V   EEKEPE
Sbjct: 181 SGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTVV---EEKEPE 240

Query: 241 DKEMTLKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKKTNDEIFAKLGTDKDK 300
           DKEMTL EYEK+ EE +K L      + +VD ++ E+MQQLS+KK+NDEIF KLG+DKDK
Sbjct: 241 DKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDK 300

Query: 301 RKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSN--RMNVAA 359
           RKD  DKEE+AKK+V+I EFLKPAEG  YY  G  GRGRG   RGG ++G +    N AA
Sbjct: 301 RKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAA 355

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BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.4e-67
Identity = 180/303 (59.41%), Postives = 217/303 (71.62%), Query Frame = 0


Query: 69  GGRGGGRGFGRGR--GGGGGFNRDSANNEN--GGRNGFSDRYQTPEDCE--KAAERR-GY 128
           GGRGG RG GRGR  G G GFN++SA++EN  G  NGFS RY+  ED E  K +ERR GY
Sbjct: 3   GGRGGPRGGGRGRGPGRGRGFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGY 62

Query: 129 GAPRGSFRGPRRGGFGNGEAE--EGERPRRVYERRSGTGRGNEF-KRDGAGRRNWGAPGD 188
           G PRG F G RRGGF NG+A   EGERPRRV++RRSGTGRGNE+ KR+G+GR NWG P D
Sbjct: 63  GGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPAD 122

Query: 189 ENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKL 248
           + A + E  V + EK V  E++ G++    D NK +    EPEEKEPE+KEMTL+EYEKL
Sbjct: 123 DIAQETEVPVNDGEKIVEAEKEAGQEE-AEDTNK-DSTAAEPEEKEPEEKEMTLEEYEKL 182

Query: 249 REESRK--LLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERA 308
            EE RK  L  K E RK  +D+ELE+MQ LS+KK +DEIF KLG++K+KRK+A    E+A
Sbjct: 183 MEEKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAV---EKA 242

Query: 309 KKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNG-SNRMNVAAPSIEDPGQFPSL 359
           +K+ +I EFLKPAEGE Y   GGRGRG GRG RGGF  G     + +APSIED GQFPSL
Sbjct: 243 RKTQSINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGGGVGGNKSFSAPSIEDVGQFPSL 299

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BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 6.1e-61
Identity = 187/367 (50.95%), Postives = 232/367 (63.22%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MA++NPFDLL  DD EDP+QLA A         +KA A  QP K AK P+KP PP+QAVR
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVALSQ----KVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60

Query: 61  ESKN--ENSRGGRGGGRGFGRGRGGGGGFNRDSANNE-NGGRNGFSDRYQTP-EDCEKAA 120
           ES+N  +  RGG GG  GF RGR G GG+NRD+ NN+  G  NGFS  Y+ P ED + A+
Sbjct: 61  ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120

Query: 121 ERRGYGAPR--GSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
                G  R  G   GPRRGG  NGE+ + ERP R Y+R S TG G   KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180

Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPED---KEMT 240
              D+  P  EE   E EK+   E+Q GED       K E   +E  +KE E+   +EMT
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGEDE--TPEAKKELTAEEKAQKEAEEAEAREMT 240

Query: 241 LKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKK-TNDEIFAKLGTDKDKRKDA 300
           L+EYEK+ EE +K L  T+V + +VD ++ E+MQQLS+KK T++EIF KLG+DK+KRKDA
Sbjct: 241 LEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDA 300

Query: 301 ADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGR-GRGSRGGFNNGSNRMNVAAPSIED 356
               E+AKKS++I EFLKPA+G+RY   GG  RGR GRG RG   N       AAP+I D
Sbjct: 301 T---EKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIGD 356

[Close]

BLAST of Chy4G067290 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 180/376 (47.87%), Postives = 231/376 (61.44%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MA++NPFDLL DDD EDP+Q+     ++ PL   K  AP Q AK  K+P+KP PP+QAVR
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIV----ASKPL---KVVAPVQTAKSGKMPTKPPPPSQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNEN-GGRNGFSDRYQTPEDCEKAAERR 120
           E++N    GGRG GRG   GRGG GG NRDS NN+     NG+   Y+  E+ + A  RR
Sbjct: 61  EARNAPG-GGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGA--RR 120

Query: 121 GYGAPRGSFRGPRRGGFGN-GEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGD 180
             G P G +RG RRG + N G++ + ERPR+ Y+R S T  GNE KRDGAGR NWG   D
Sbjct: 121 --GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQD 180

Query: 181 ENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKL 240
           +  P  EE  A  +KN+  E+Q GE       N   E   E  E++PEDKEMTL+EYEK+
Sbjct: 181 DITPVTEESTAVVDKNLTVEKQDGEGEATDAKN---ETPAEKAEEKPEDKEMTLEEYEKV 240

Query: 241 REESRKLLAKTEVRKAEVD-EELENMQQLSSKKT-NDEIFAKLGTDKDKRKDAADKEERA 300
            EE +K L  T+V + +VD +  E MQQLSSKK+ NDE+F KLGT+KDKR    ++EE+ 
Sbjct: 241 LEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKT 300

Query: 301 KKSVTITEFLKPAEGERYYNPGG--RGRGRGRGSR-------------GGFN--NGSNRM 356
           +KS++I EFLKPA+G+ YY P G  +G   GRG R             GG N  +G    
Sbjct: 301 RKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAA 358

[Close]

BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match: A0A0A0LKF6 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914560 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.7e-178
Identity = 347/358 (96.93%), Postives = 349/358 (97.49%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAHRSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
           ESKN+N RGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPED EKAAERRG
Sbjct: 61  ESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERRG 120

Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
           YGAPRGSFRGPRR GF NGEAEEGERPRRVYERRSGTGRGNEFKR+GAGRRNWGAPGDEN
Sbjct: 121 YGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDEN 180

Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           APDVEE VAENEKNVAPEQQLGED VV DNNK EEAVKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
           ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV
Sbjct: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 359
           TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match: A0A1S3CPW2 (plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103503456 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.3e-175
Identity = 348/359 (96.94%), Postives = 348/359 (96.94%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGR-GGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERR 120
           ESKNENSRGGRGGGRGFGRGR GGGGGFNRDSANNEN GRNGFSDRYQTPED EKAAERR
Sbjct: 61  ESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENSGRNGFSDRYQTPEDGEKAAERR 120

Query: 121 GYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180
           GYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180

Query: 181 NAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240
           NAPDVEE VAENEKNVAPEQQLGED  V DNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDG-VDDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240

Query: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKS 300
           EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEERAKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERAKKS 300

Query: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 359
           VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match: A0A6J1EUM3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111438060 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.6e-159
Identity = 329/364 (90.38%), Postives = 337/364 (92.58%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
           ESKNENSR GRGGGRGFGRGR GGGGFNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61  ESKNENSR-GRGGGRGFGRGR-GGGGFNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120

Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
           YG PRGSFRGPRRGGF NGE EEGE+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180

Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           APDVEE VAENEKNVAPEQQLGED+VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
           ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNV----AAPSIEDPGQFPSL 359
           TITEFLKPAEGERYYNPGGRGRGRGR GSRGGFNNGSNRMNV    AAPSIED GQFPSL
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFPSL 360

[Close]

BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match: A0A5A7TA70 (Plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00150 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.6e-157
Identity = 321/364 (88.19%), Postives = 322/364 (88.46%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQA  
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQA-- 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNR------DSANNENGGRNGFSDRYQTPEDCEK 120
                                   GGF+       DSANNENGGRNGFSDRYQTPED EK
Sbjct: 61  ------------------------GGFSSLLLLVLDSANNENGGRNGFSDRYQTPEDGEK 120

Query: 121 AAERRGYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
           AAERRGYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG
Sbjct: 121 AAERRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180

Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKE 240
           APGDENAPDVEE VAENEKNVAPEQQLGED  V DNNKAEEAVKEPEEKEPEDKEMTLKE
Sbjct: 181 APGDENAPDVEEPVAENEKNVAPEQQLGEDG-VDDNNKAEEAVKEPEEKEPEDKEMTLKE 240

Query: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEE 300
           YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEE
Sbjct: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEE 300

Query: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 359
           RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS
Sbjct: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 337

[Close]

BLAST of Chy4G067290 vs. ExPASy TrEMBL
Match: A0A6J1I4B3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111470534 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 325/363 (89.53%), Postives = 332/363 (91.46%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
           ESKNENSR GRGGGRGFGRGR GGGGFNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61  ESKNENSR-GRGGGRGFGRGR-GGGGFNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120

Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
           YG PRGSFRGPRRGGF NGE EE E+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEAEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180

Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           APDVE  VAENEKNVAPEQQLGED VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEAPVAENEKNVAPEQQLGEDGVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
           ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD  DKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIVDKEEKAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGR-GSRGGFNNGSNRMNV---AAPSIEDPGQFPSL- 359
           TITEFLKP EGERYYNPGGRGRGRGR GSRGGFNNGSNRMNV   AAPSIED GQFPSL 
Sbjct: 301 TITEFLKPTEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAPSIEDQGQFPSLM 360

[Close]

BLAST of Chy4G067290 vs. NCBI nr
Match: XP_004148350.1 (RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN60476.1 hypothetical protein Csa_001243 [Cucumis sativus])

HSP 1 Score: 631 bits (1627), Expect = 1.29e-226
Identity = 347/358 (96.93%), Postives = 349/358 (97.49%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAHRSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
           ESKN+N RGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPED EKAAERRG
Sbjct: 61  ESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERRG 120

Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
           YGAPRGSFRGPRR GF NGEAEEGERPRRVYERRSGTGRGNEFKR+GAGRRNWGAPGDEN
Sbjct: 121 YGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDEN 180

Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           APDVEE VAENEKNVAPEQQLGED VV DNNK EEAVKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
           ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV
Sbjct: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
           TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Chy4G067290 vs. NCBI nr
Match: XP_008465866.1 (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 622 bits (1603), Expect = 5.85e-223
Identity = 348/359 (96.94%), Postives = 348/359 (96.94%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGG-FNRDSANNENGGRNGFSDRYQTPEDCEKAAERR 120
           ESKNENSRGGRGGGRGFGRGRGGGGG FNRDSANNEN GRNGFSDRYQTPED EKAAERR
Sbjct: 61  ESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENSGRNGFSDRYQTPEDGEKAAERR 120

Query: 121 GYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180
           GYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE
Sbjct: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180

Query: 181 NAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240
           NAPDVEE VAENEKNVAPEQQLGED V  DNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDGVD-DNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240

Query: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKS 300
           EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEERAKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERAKKS 300

Query: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358
           VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPSLSAK 358

[Close]

BLAST of Chy4G067290 vs. NCBI nr
Match: XP_022931786.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])

HSP 1 Score: 567 bits (1461), Expect = 2.76e-201
Identity = 329/364 (90.38%), Postives = 337/364 (92.58%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
           ESKNENSRG RGGGRGFGRGRGGGG FNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61  ESKNENSRG-RGGGRGFGRGRGGGG-FNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120

Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
           YG PRGSFRGPRRGGF NGE EEGE+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180

Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           APDVEE VAENEKNVAPEQQLGED+VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
           ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRG-SRGGFNNGSNRMNVAA----PSIEDPGQFPSL 358
           TITEFLKPAEGERYYNPGGRGRGRGRG SRGGFNNGSNRMNVAA    PSIED GQFPSL
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAPSIEDQGQFPSL 360

[Close]

BLAST of Chy4G067290 vs. NCBI nr
Match: KAG6571794.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 566 bits (1460), Expect = 4.07e-201
Identity = 329/365 (90.14%), Postives = 337/365 (92.33%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQL SA RSAP +PSKKAPA AQPAKPA LPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLVSAQRSAPAVPSKKAPALAQPAKPANLPSKPLPPAQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDCEKAAERRG 120
           ESKNENSRG RGGGRGFGRGRGGGG FNRDSANNENGG+NGFSDRYQ PED EKA ERRG
Sbjct: 61  ESKNENSRG-RGGGRGFGRGRGGGG-FNRDSANNENGGKNGFSDRYQAPEDGEKATERRG 120

Query: 121 YGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEN 180
           YG PRGSFRGPRRGGF NGE EEGE+PRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 
Sbjct: 121 YGGPRGSFRGPRRGGFSNGETEEGEQPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDEI 180

Query: 181 APDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           APDVEE VAENEKNVAPEQQLGED+VV DNNK EEAVKE EEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDSVVDDNNK-EEAVKEAEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300
           ESRKLLAKTE+RKAEVDEELENMQQLS KK+NDEIFAKLG+DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTELRKAEVDEELENMQQLSCKKSNDEIFAKLGSDKDKRKDIADKEEKAKKSV 300

Query: 301 TITEFLKPAEGERYYNPGGRGRGRGRG-SRGGFNNGSNRMNVAA-----PSIEDPGQFPS 358
           TITEFLKPAEGERYYNPGGRGRGRGRG SRGGFNNGSNRMNVAA     PSIED GQFPS
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNGSNRMNVAAAAAAAPSIEDQGQFPS 360

[Close]

BLAST of Chy4G067290 vs. NCBI nr
Match: KAA0038491.1 (plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 561 bits (1445), Expect = 3.13e-199
Identity = 321/364 (88.19%), Postives = 322/364 (88.46%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP LPSKKAPAPAQPAKPAKLPSKPLPPAQA  
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQA-- 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNR------DSANNENGGRNGFSDRYQTPEDCEK 120
                                   GGF+       DSANNENGGRNGFSDRYQTPED EK
Sbjct: 61  ------------------------GGFSSLLLLVLDSANNENGGRNGFSDRYQTPEDGEK 120

Query: 121 AAERRGYGAPRGSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
           AAERRGYGAPRGSFRGPRRGGF NGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG
Sbjct: 121 AAERRGYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180

Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKE 240
           APGDENAPDVEE VAENEKNVAPEQQLGED V  DNNKAEEAVKEPEEKEPEDKEMTLKE
Sbjct: 181 APGDENAPDVEEPVAENEKNVAPEQQLGEDGVD-DNNKAEEAVKEPEEKEPEDKEMTLKE 240

Query: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEE 300
           YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKD ADKEE
Sbjct: 241 YEKLREESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEE 300

Query: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 358
           RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS
Sbjct: 301 RAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSNRMNVAAPSIEDPGQFPS 337

[Close]

BLAST of Chy4G067290 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 273.1 bits (697), Expect = 3.2e-73
Identity = 208/375 (55.47%), Postives = 248/375 (66.13%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPA-KLPSKPLPPAQAV 60
           MAT+NPFDLL DDD EDP+QLA A         K     + PAK A KLPSKPLPPAQAV
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDK-SKKSGQVSSLPAKSAPKLPSKPLPPAQAV 60

Query: 61  RESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPE---DCEKAA 120
           RE++++  RGG GG  GF RGR   GG+NRD       G NG+S  Y  P    D  K++
Sbjct: 61  REARSDAPRGG-GGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 120

Query: 121 -ERR-GYGAPRGSFRGP-------RRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDG 180
            ERR G GAPRGSFRG        RRGGF N E  +GERPRR +ERRSGTGRG++FKRDG
Sbjct: 121 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 180

Query: 181 AGRRNWGAPGDENAPDVEELV-AENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPE 240
           +GR NWG PG+E A + E +   E EK+V  +  +  D V  D NK +  V   EEKEPE
Sbjct: 181 SGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTVV---EEKEPE 240

Query: 241 DKEMTLKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKKTNDEIFAKLGTDKDK 300
           DKEMTL EYEK+ EE +K L      + +VD ++ E+MQQLS+KK+NDEIF KLG+DKDK
Sbjct: 241 DKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDK 300

Query: 301 RKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSN--RMNVAA 359
           RKD  DKEE+AKK+V+I EFLKPAEG  YY  G  GRGRG   RGG ++G +    N AA
Sbjct: 301 RKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAA 355

[Close]

BLAST of Chy4G067290 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 236.1 bits (601), Expect = 4.4e-62
Identity = 187/367 (50.95%), Postives = 232/367 (63.22%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MA++NPFDLL  DD EDP+QLA A         +KA A  QP K AK P+KP PP+QAVR
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVALSQ----KVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60

Query: 61  ESKN--ENSRGGRGGGRGFGRGRGGGGGFNRDSANNE-NGGRNGFSDRYQTP-EDCEKAA 120
           ES+N  +  RGG GG  GF RGR G GG+NRD+ NN+  G  NGFS  Y+ P ED + A+
Sbjct: 61  ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120

Query: 121 ERRGYGAPR--GSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
                G  R  G   GPRRGG  NGE+ + ERP R Y+R S TG G   KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180

Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPED---KEMT 240
              D+  P  EE   E EK+   E+Q GED       K E   +E  +KE E+   +EMT
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGEDE--TPEAKKELTAEEKAQKEAEEAEAREMT 240

Query: 241 LKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKK-TNDEIFAKLGTDKDKRKDA 300
           L+EYEK+ EE +K L  T+V + +VD ++ E+MQQLS+KK T++EIF KLG+DK+KRKDA
Sbjct: 241 LEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDA 300

Query: 301 ADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGR-GRGSRGGFNNGSNRMNVAAPSIED 356
               E+AKKS++I EFLKPA+G+RY   GG  RGR GRG RG   N       AAP+I D
Sbjct: 301 T---EKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIGD 356

[Close]

BLAST of Chy4G067290 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-60
Identity = 172/316 (54.43%), Postives = 209/316 (66.14%), Query Frame = 0


Query: 59  VRESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPE---DCEKA 118
           VRE++++  RGG GG  GF RGR   GG+NRD       G NG+S  Y  P    D  K+
Sbjct: 48  VREARSDAPRGG-GGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKS 107

Query: 119 A-ERR-GYGAPRGSFRGP-------RRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRD 178
           + ERR G GAPRGSFRG        RRGGF N E  +GERPRR +ERRSGTGRG++FKRD
Sbjct: 108 SYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRD 167

Query: 179 GAGRRNWGAPGDENAPDVEELV-AENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEP 238
           G+GR NWG PG+E A + E +   E EK+V  +  +  D V  D NK +  V   EEKEP
Sbjct: 168 GSGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTVV---EEKEP 227

Query: 239 EDKEMTLKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKKTNDEIFAKLGTDKD 298
           EDKEMTL EYEK+ EE +K L      + +VD ++ E+MQQLS+KK+NDEIF KLG+DKD
Sbjct: 228 EDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD 287

Query: 299 KRKDAADKEERAKKSVTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNGSN--RMNVA 358
           KRKD  DKEE+AKK+V+I EFLKPAEG  YY  G  GRGRG   RGG ++G +    N A
Sbjct: 288 KRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEA 345

[Close]

BLAST of Chy4G067290 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 221.9 bits (564), Expect = 8.5e-58
Identity = 180/376 (47.87%), Postives = 231/376 (61.44%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MA++NPFDLL DDD EDP+Q+     ++ PL   K  AP Q AK  K+P+KP PP+QAVR
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIV----ASKPL---KVVAPVQTAKSGKMPTKPPPPSQAVR 60

Query: 61  ESKNENSRGGRGGGRGFGRGRGGGGGFNRDSANNEN-GGRNGFSDRYQTPEDCEKAAERR 120
           E++N    GGRG GRG   GRGG GG NRDS NN+     NG+   Y+  E+ + A  RR
Sbjct: 61  EARNAPG-GGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGA--RR 120

Query: 121 GYGAPRGSFRGPRRGGFGN-GEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGD 180
             G P G +RG RRG + N G++ + ERPR+ Y+R S T  GNE KRDGAGR NWG   D
Sbjct: 121 --GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQD 180

Query: 181 ENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPEDKEMTLKEYEKL 240
           +  P  EE  A  +KN+  E+Q GE       N   E   E  E++PEDKEMTL+EYEK+
Sbjct: 181 DITPVTEESTAVVDKNLTVEKQDGEGEATDAKN---ETPAEKAEEKPEDKEMTLEEYEKV 240

Query: 241 REESRKLLAKTEVRKAEVD-EELENMQQLSSKKT-NDEIFAKLGTDKDKRKDAADKEERA 300
            EE +K L  T+V + +VD +  E MQQLSSKK+ NDE+F KLGT+KDKR    ++EE+ 
Sbjct: 241 LEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKT 300

Query: 301 KKSVTITEFLKPAEGERYYNPGG--RGRGRGRGSR-------------GGFN--NGSNRM 356
           +KS++I EFLKPA+G+ YY P G  +G   GRG R             GG N  +G    
Sbjct: 301 RKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAA 358

[Close]

BLAST of Chy4G067290 vs. TAIR 10
Match: AT5G47210.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 152/306 (49.67%), Postives = 194/306 (63.40%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPPLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60
           MA++NPFDLL  DD EDP+QLA A         +KA A  QP K AK P+KP PP+QAVR
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVALSQ----KVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60

Query: 61  ESKN--ENSRGGRGGGRGFGRGRGGGGGFNRDSANNE-NGGRNGFSDRYQTP-EDCEKAA 120
           ES+N  +  RGG GG  GF RGR G GG+NRD+ NN+  G  NGFS  Y+ P ED + A+
Sbjct: 61  ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120

Query: 121 ERRGYGAPR--GSFRGPRRGGFGNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWG 180
                G  R  G   GPRRGG  NGE+ + ERP R Y+R S TG G   KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180

Query: 181 APGDENAPDVEELVAENEKNVAPEQQLGEDAVVVDNNKAEEAVKEPEEKEPED---KEMT 240
              D+  P  EE   E EK+   E+Q GED       K E   +E  +KE E+   +EMT
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGEDE--TPEAKKELTAEEKAQKEAEEAEAREMT 240

Query: 241 LKEYEKLREESRKLLAKTEVRKAEVDEEL-ENMQQLSSKK-TNDEIFAKLGTDKDKRKDA 296
           L+EYEK+ EE +K L  T+V + +VD ++ E+MQQLS+KK T++EIF KLG+DK+KRKDA
Sbjct: 241 LEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDA 298

The following BLAST results are available for this feature:

BLAST of Chy4G067290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	4.5e-72	55.47	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	4.4e-67	59.41	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
Q9LVT8	6.1e-61	50.95	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
O23593	1.2e-56	47.87	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of Chy4G067290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKF6	3.7e-178	96.93	HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914...	[more]
A0A1S3CPW2	2.3e-175	96.94	plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=36...	[more]
A0A6J1EUM3	6.6e-159	90.38	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5A7TA70	3.6e-157	88.19	Plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo var. ...	[more]
A0A6J1I4B3	1.4e-156	89.53	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Chy4G067290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148350.1	1.29e-226	96.93	RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN60476.1 hypothet...	[more]
XP_008465866.1	5.85e-223	96.94	PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m...	[more]
XP_022931786.1	2.76e-201	90.38	RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata]	[more]
KAG6571794.1	4.07e-201	90.14	RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp...	[more]
KAA0038491.1	3.13e-199	88.19	plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo var. ma...	[more]

BLAST of Chy4G067290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	3.2e-73	55.47	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	4.4e-62	50.95	Hyaluronan / mRNA binding family	[more]
AT4G16830.3	1.8e-60	54.43	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	8.5e-58	47.87	Hyaluronan / mRNA binding family	[more]
AT5G47210.3	1.8e-47	49.67	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 228..266
None	No IPR available	GENE3D	6.10.140.1040		coord: 145..259 e-value: 2.3E-7 score: 33.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..182
None	No IPR available	PANTHER	PTHR12299:SF64	PLASMINOGEN ACTIVATOR INHIBITOR 1 RNA-BINDING PROTEIN-LIKE	coord: 1..358
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 147..257 e-value: 3.5E-31 score: 119.6
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 147..256 e-value: 4.0E-23 score: 82.5
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..73 e-value: 3.2E-22 score: 79.2
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G067290.1	Chy4G067290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding