Chy3G062380 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACAACAATCGCCGCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCACCAAATCTGGCCGCTACTGGCCGACGGCTTCTGCAGCGTCCACAAGTGGCTCCCCTTCGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCGGGCTTGATCCGCCACTGCGCCACTACCGATACCACGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCGATCGCACATACTCTCACCTACGAGATCCTCGATAATAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGATGCAAGTTCGTCTGGTCATTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGCTCTCCACCAAATGATGAAAAAAATGGCTGACTTTTTGCAGAAAAGTCCCTAA ATGGAACAACAATCGCCGCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCACCAAATCTGGCCGCTACTGGCCGACGGCTTCTGCAGCGTCCACAAGTGGCTCCCCTTCGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCGGGCTTGATCCGCCACTGCGCCACTACCGATACCACGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCGATCGCACATACTCTCACCTACGAGATCCTCGATAATAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGATGCAAGTTCGTCTGGTCATTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGCTCTCCACCAAATGATGAAAAAAATGGCTGACTTTTTGCAGAAAAGTCCCTAA ATGGAACAACAATCGCCGCCGTCGAAGTGGGAAGGAGAAGTCTTCGCCGAGACAACCGCCGCAGATCCCCACCAAATCTGGCCGCTACTGGCCGACGGCTTCTGCAGCGTCCACAAGTGGCTCCCCTTCGTCGACACCTGTCACTACGTCGAAGGCGTACCTGGGCAGCCGGGCTTGATCCGCCACTGCGCCACTACCGATACCACGTCGTCGATCAAGTGGGCCAAAGAGAGGCTGAATCTGATTGATCCGATCGCACATACTCTCACCTACGAGATCCTCGATAATAACATGGGATTCAAATCCTACGTGGCCACCATGAAGCTACTCCAGGGAAGCGGCGGGGGATGCAAGTTCGTCTGGTCATTCGTGGCGGATCCGATCGAAGGGTGGCCGCTGGAGGAGTTTGTGAAGTATCTTGACTCTGCTCTCCACCAAATGATGAAAAAAATGGCTGACTTTTTGCAGAAAAGTCCCTAA MEQQSPPSKWEGEVFAETTAADPHQIWPLLADGFCSVHKWLPFVDTCHYVEGVPGQPGLIRHCATTDTTSSIKWAKERLNLIDPIAHTLTYEILDNNMGFKSYVATMKLLQGSGGGCKFVWSFVADPIEGWPLEEFVKYLDSALHQMMKKMADFLQKSP* Homology
BLAST of Chy3G062380 vs. ExPASy TrEMBL
Match: A0A0A0LLI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373480 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.2e-89 Identity = 157/162 (96.91%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Chy3G062380 vs. ExPASy TrEMBL
Match: A0A0A0LS03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373490 PE=3 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82 Identity = 146/162 (90.12%), Postives = 150/162 (92.59%), Query Frame = 0
BLAST of Chy3G062380 vs. ExPASy TrEMBL
Match: A0A5A7VDC6 (Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003750 PE=3 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 4.7e-72 Identity = 132/163 (80.98%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of Chy3G062380 vs. ExPASy TrEMBL
Match: A0A1S3BCJ7 (lachrymatory-factor synthase OS=Cucumis melo OX=3656 GN=LOC103488174 PE=3 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 4.7e-72 Identity = 132/163 (80.98%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of Chy3G062380 vs. ExPASy TrEMBL
Match: A0A6J1HER8 (lachrymatory-factor synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111462382 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67 Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0
BLAST of Chy3G062380 vs. NCBI nr
Match: XP_011649730.2 (lachrymatory-factor synthase [Cucumis sativus] >KAE8652160.1 hypothetical protein Csa_022411 [Cucumis sativus]) HSP 1 Score: 333 bits (855), Expect = 1.58e-115 Identity = 156/162 (96.30%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Chy3G062380 vs. NCBI nr
Match: XP_004148423.3 (lachrymatory-factor synthase [Cucumis sativus]) HSP 1 Score: 317 bits (813), Expect = 4.18e-109 Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 0
BLAST of Chy3G062380 vs. NCBI nr
Match: KAE8652161.1 (hypothetical protein Csa_022268 [Cucumis sativus]) HSP 1 Score: 317 bits (813), Expect = 2.02e-106 Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 0
BLAST of Chy3G062380 vs. NCBI nr
Match: XP_008445004.1 (PREDICTED: lachrymatory-factor synthase [Cucumis melo] >KAA0065047.1 lachrymatory-factor synthase [Cucumis melo var. makuwa]) HSP 1 Score: 277 bits (709), Expect = 3.22e-93 Identity = 132/163 (80.98%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of Chy3G062380 vs. NCBI nr
Match: XP_023547300.1 (lachrymatory-factor synthase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268 bits (684), Expect = 2.15e-89 Identity = 129/165 (78.18%), Postives = 139/165 (84.24%), Query Frame = 0
BLAST of Chy3G062380 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 149.4 bits (376), Expect = 2.4e-36 Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = 0
BLAST of Chy3G062380 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 4.2e-33 Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 0
BLAST of Chy3G062380 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 4.2e-33 Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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