Chy3G056900 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G056900
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Location	chrH03: 9608861 .. 9609587 (-)
RNA-Seq Expression	Chy3G056900
Synteny	Chy3G056900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCCTGGCCTTCACTTCCCATTCAAGTAAGCTTCTGGAATCTTCATTTTCATTTCTTGGTTTTGTTTACTGGCTTCCATTTGAAGTTTTTCTGCAGCTTAAAATGAGGTTTTTACACAAGAATCGTTGAAACCCTCTGAAGGGTTTTCAAGAAATCAGTGGAAATTAGAAAATAAGCTGTTGGGTTAATTTTTAAAATTTTTTGTGATGAACCCTTTTTCTGGAATCTTGTTTAGGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGGCTAGCCAATCTCCTCCTGGTATTAGATTTTTATTTTCCATTTTTACTCATCTTCTTCATCTATTGGTTCGTTTTTTTTTGTTACTTAACATTTCTTTGGGCCTTTTCTTGTTTTTCTTGTGTTTTTTCTTTTACAGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACTCATTTCAATGTCTTCACTCTCTTTCAGTTTTTGAAGAATTGATCTCACATTCAACTTTTTAG

mRNA sequence

ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCCTGGCCTTCACTTCCCATTCAAGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGGCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACTCATTTCAATGTCTTCACTCTCTTTCAGTTTTTGAAGAATTGATCTCACATTCAACTTTTTAG

Coding sequence (CDS)

ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCCTGGCCTTCACTTCCCATTCAAGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGGCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACTCATTTCAATGTCTTCACTCTCTTTCAGTTTTTGAAGAATTGATCTCACATTCAACTTTTTAG

Protein sequence

MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYSFQCLHSLSVFEELISHSTF*

Homology

[Close]

BLAST of Chy3G056900 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 9.9e-33
Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAV +L  +I LA   HSS T+C+CK+GLS+  LQK+LDYACGAGADC PI Q GPCF P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           NTVK HCSYAVNS+FQ+KGQ  G+CDF+GTA+ S S P+  + C +P+S
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTT-CPFPAS 107

[Close]

BLAST of Chy3G056900 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 5   LLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVK 64
           L+ YL+ L    H+SA++C+CK GLSD  LQK+LDYACG GADC P    G CF P+ V+
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 65  DHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
            HC+YAVNS+FQ+KGQ   SC+F+GTA+ + + P+  +GC +PSS
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSY-TGCAFPSS 107

[Close]

BLAST of Chy3G056900 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-27
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MA L+L  L+ L+   HSSA++C+CK GLSD  LQ +LDYACG GADC P      CF P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           + V+ HC+YAVNS+FQ+KGQ  GSC+F GTA+ + S P+  +GC +P+S
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSY-TGCAFPTS 107

[Close]

BLAST of Chy3G056900 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-26
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           M+VLL   LI   FT +S+A YC+CK+G ++Q LQK++DYACG GADCT I   G C+QP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           NTVK+HC  AVNSY+Q+K     +CDF+G AS S +PP+ AS C+  SS
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSS 107

[Close]

BLAST of Chy3G056900 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.2e-23
Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLL  +L+   FT +S+A  C+CKD  ++  LQK +D+ACG GADC  I   G C+QP
Sbjct: 1   MAVLLPLFLLSFMFT-YSNAAVCVCKDA-NELDLQKVIDFACGGGADCAQIQTTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           NT+K+HC  AVNSY+Q+K     +CDF+G A  S SPP+  S C+  SS
Sbjct: 61  NTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCLSSSS 107

[Close]

BLAST of Chy3G056900 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYS 114
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAS SQSPPAVASGCVYPSSP ++
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFT 113

[Close]

BLAST of Chy3G056900 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYS 114
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPPAVASGCVYPSSP ++
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFT 113

[Close]

BLAST of Chy3G056900 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYS 114
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPPAVASGCVYPSSP ++
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFT 113

[Close]

BLAST of Chy3G056900 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.2e-51
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MA++LLCYL+F+AFT HSSATYC+CKDG SDQALQKSLDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSP 111
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA+ S SPPA ASGCVYPSSP
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSP 110

[Close]

BLAST of Chy3G056900 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.3e-50
Identity = 99/109 (90.83%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLC+LIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAVLLLCHLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPP  ASGCVY SS
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSS 109

[Close]

BLAST of Chy3G056900 vs. NCBI nr
Match: KAG6598636.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (563), Expect = 5.09e-72
Identity = 109/123 (88.62%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYSFQCLHSL 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPP  ASGCVY SS RY FQ  HSL
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSRYPFQFPHSL 120

Query: 121 SVF 123
           +VF
Sbjct: 121 AVF 123

[Close]

BLAST of Chy3G056900 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus])

HSP 1 Score: 221 bits (564), Expect = 5.01e-71
Identity = 108/113 (95.58%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYS 113
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAS SQSPPAVASGCVYPSSP ++
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFT 113

[Close]

BLAST of Chy3G056900 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida])

HSP 1 Score: 218 bits (554), Expect = 1.46e-69
Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCT ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTAILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYS 113
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPPAVASGCVYPSSP ++
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFT 113

[Close]

BLAST of Chy3G056900 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 6.75e-69
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPCFQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSPRYS 113
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPPAVASGCVYPSSP ++
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFT 113

[Close]

BLAST of Chy3G056900 vs. NCBI nr
Match: XP_022131475.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia])

HSP 1 Score: 208 bits (530), Expect = 7.43e-66
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MA++LLCYL+F+AFT HSSATYC+CKDG SDQALQKSLDYACGAGADCTPILQNGPCFQP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSSP 110
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA+ S SPPA ASGCVYPSSP
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSP 110

[Close]

BLAST of Chy3G056900 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 6.4e-35
Identity = 66/108 (61.11%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 4   LLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQPNTV 63
           LLL  L  LA T++SSATYC+C+DG+ ++ LQ S+DYACG   DC PI + GPC+QPNT+
Sbjct: 3   LLLSLLFLLALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPNTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTASASQS-PPAVASGCVYPSSP 111
           K HC +AVN+YFQR GQ+ GSC+FSGTA+ SQ+ P  V +GC+YPSSP
Sbjct: 63  KSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSP 110

[Close]

BLAST of Chy3G056900 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 141.0 bits (354), Expect = 7.1e-34
Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MAV +L  +I LA   HSS T+C+CK+GLS+  LQK+LDYACGAGADC PI Q GPCF P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           NTVK HCSYAVNS+FQ+KGQ  G+CDF+GTA+ S S P+  + C +P+S
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTT-CPFPAS 107

[Close]

BLAST of Chy3G056900 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-32
Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 4   LLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQPNTV 63
           +LL  L+ L+ T+ SSA YC+CKDG+ D  LQ S+DYACG  ADC PI   G C+QP+T+
Sbjct: 3   VLLGLLLLLSLTNSSSAIYCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPA-VASGCVYPSSP 111
           K HC +AVNSYFQ   QV GSC+FSGTA+ + +PP+ +A+GC+YPSSP
Sbjct: 63  KSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSNLANGCIYPSSP 110

[Close]

BLAST of Chy3G056900 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 )

HSP 1 Score: 125.6 bits (314), Expect = 3.1e-29
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 5   LLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVK 64
           L+ YL+ L    H+SA++C+CK GLSD  LQK+LDYACG GADC P    G CF P+ V+
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 65  DHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
            HC+YAVNS+FQ+KGQ   SC+F+GTA+ + + P+  +GC +PSS
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSY-TGCAFPSS 107

[Close]

BLAST of Chy3G056900 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCFQP 60
           MA L+L  L+ L+   HSSA++C+CK GLSD  LQ +LDYACG GADC P      CF P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASASQSPPAVASGCVYPSS 110
           + V+ HC+YAVNS+FQ+KGQ  GSC+F GTA+ + S P+  +GC +P+S
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSY-TGCAFPTS 107

The following BLAST results are available for this feature:

BLAST of Chy3G056900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	9.9e-33	63.30	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q9SD84	4.3e-28	54.29	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9FNQ2	3.7e-27	54.13	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q93V72	1.4e-26	55.96	PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4...	[more]
Q9FZD0	3.2e-23	50.46	Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Chy3G056900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDN8	2.5e-55	95.58	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=...	[more]
A0A5A7V8S9	1.1e-53	93.81	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BDH0	1.1e-53	93.81	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1BPT8	2.2e-51	90.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1HDW5	9.3e-50	90.83	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Chy3G056900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598636.1	5.09e-72	88.62	PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_004144176.1	5.01e-71	95.58	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMO...	[more]
XP_038886488.1	1.46e-69	94.69	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]	[more]
XP_008445454.1	6.75e-69	93.81	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA00647...	[more]
XP_022131475.1	7.43e-66	90.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia]	[more]

BLAST of Chy3G056900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03505.1	6.4e-35	61.11	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G18650.1	7.1e-34	63.30	plasmodesmata callose-binding protein 3	[more]
AT1G13830.1	1.7e-32	58.33	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G08000.1	3.1e-29	54.29	glucan endo-1,3-beta-glucosidase-like protein 3	[more]
AT5G61130.1	2.6e-28	54.13	plasmodesmata callose-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 21..106 e-value: 9.3E-40 score: 148.1
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 22..92 e-value: 1.1E-21 score: 77.3
None	No IPR available	GENE3D	1.20.58.1040		coord: 15..109 e-value: 8.6E-10 score: 40.9
None	No IPR available	PANTHER	PTHR31044:SF95	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1	coord: 1..118
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G056900.1	Chy3G056900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma