Chy3G052390 (gene) Cucumber (hystrix) v1

Overview
NameChy3G052390
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH03: 2590618 .. 2596218 (-)
RNA-Seq ExpressionChy3G052390
SyntenyChy3G052390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACCAGGTATAATTAAATTAAGTTTGATGTGAACAAATAATTATATTACTTTTGTTTATTTGAATATTAGTTAATTGTTTGGTTTGATGAAAGTTAAGTTGTGTTTATAAATGTCAGATTAGTTTTATTATATTCATATAGCAAAGTTTTAAACTTTATATATTAAATTGAATATTGTTTTTTTACTAATAAAATAATTTTACTAGCACTTACCTATGTTGCAAAAGATATGTGCGCAATGTCCATTGGTTCACCTTTAATAACAATTATATATGTTACTAAAACTTAAATTTTAGTGATAAACTTGCAAAGTCACTGCATAAGGCAAATAATAACGACACAACGTGTTGTTAAAAGTGAGCATTAGCAAGGAAAATTGTATTAGATGACAATTTTTTTTTAAAAAATAGCTCATAACATATCTTTTTTGCATATTGCAAATTTGACAAATCTGACGTTAATATTCTTTTAAATTTGCCATTTTTACAATTTTAAAAAATATAACTGACATGGACTCTATTACATAAAATTTTTGGTTATTTTTGCAAACTCCCCTATTAATAAGGCTAAAAATTGTCTTTTAGTGGTGGGTGGGCTGTGGATATGTCACTAAAATCTCTAGCTATGCAGAATCAATAACATTTTTAGCTTGCTAATTAGTGGCATATTTTGACTTTTAGCAACATGTTTCATGTGCCGGTACTTAAAGTGGTTTTTCTTGTAGTGTAGTAAAATGATGTAGAATTAAGTATTGAAGGAAAATTGTGTACTACAATCTAAATGAATGATCTATGATTGTTTAGGTCATGATACACGATCGTGTAGTTCTTTTTAACGATGGAAAAAAGCCTTCCATTTTCAACAATTGTGTTGCCATGGTACGCGATTTGTCAAACATGATCGTGTAGTTCGTTTTAAACGATGAAAAAAAGTTTCAAATTTAAACGATCGTGTTGACCCTAGTAAACGATAGTGTAGTTCATTTTAAATGATGCGAAAAAGACTTCAAATTTAAACAATCGTGTTGACAATGGTAAACAATCGTGTTGATCATTTAAAATAATATTTAAACGATCTTGATATTCTCCAATACGAAAAAGATGAAGAAGAATATTCGAAACAATCGTGAAATAACTTCGAAAAACTCTTGTGCTAAAAATGATAAAGATCAAATAGGACATTTAATCAGAAGAATAAAATGAAAAAGAAAATATGGAAGACGAGATGATGAAATTTGGAAGAGGAGAGAAATCACAAAGATGAAATAATAAGAAAGAGAAGTGATGTAAGGGCAAATCTGAAAAATTATGAAATACTTTTACTGACTTGGGCTTTTTTTTTTTTTTTTTGTTACACATGCCGTAAATATGCATAGGTTTTGTTACATTTACGTAAATTAACATTTTTTTAAGTAGATTTAAGAGTTATCTTTAAATATAGAAAAACCAACCAAAATCGGTATACAATATAACAAAATGTGATCTATCTACGATGAATCAGATAGACTGTGACATTTTGGTGTCTTTGTAAATATTTTTAGAAGTCTTGTTATTTAAAACAATTTTTCTAAATTTAATTACATTTATTGAAACCTACAAAATTTAAATACTTCATACTAAAATGTGAGATACAAAGAATTATAAGTAAACTTGTGTTATTCCTAAGAAAAAACTTAGACAACCCATGTGGTGAAGTGCAGCTTGAGATGTGAAACTACATGAAAAGTAGAATTTATAACCAAAGGAAATAACAATTTAAAGTTGAAATTATTCAAAGTGTTAGCAAAGGATTCCTTGTTGGTCAATAACATTCACAAAGCAATGAAAGAAATAAAAAGTATTGTTCCCTAAAGATTGAATAATAGTAATTACCCCACAAACTTCAAACTTATGTTTCTTTCTTCAAATTTTCTCCTATGAAAATACTATTCCCATTCCCACCTCCTCACTCCAAGCATACACTAATTCAAATTCTTTGCCATACTCCTAAGAGAGACAATGAGGTTAACCTAATTTATGCATTTTTCTTTTTCTATATGTAGTTATAAAGAATAAATAATTCCATCTTTAAAATTCCGATCACAACCAATTTTTTAAGCACATGCAAAAAAGACTCAACCTAATTCCTTCGACCTCTTCTGTCCTTTCAAATCAAGAAAGGATAAAATGTTAAACCACTAATTGAAGGGGCAATTTTTTTTGTTTCGTTTCTAAGTTTTTGATCATTTAATTCTTTAAATTTTGAGTTTGGTTTTAATTTAGTATATTGATTATATATATAATGCTACAATTTTACTCTTTAAAATTTGAGATGGTAATTTGGTGCTTAGATTTCAAGATTTAACCTTGATTTTTCATCATTAAACATTCATTTTAAAGTTTCAGTTCATTCTATTGGTTTACTATTATGAATGAATTCTGATATAATGATGATATATACAACTAATATACCAATTCTAATTATACATTCAAAATTTTATTTAGGGTAAATGTTGATATTAGGCTATGCAATCACAATCGCATCACTATCCTATGAACCGAGAACATCTTCTCTTCAATCTTGTTTAACAAATATCTTTAGAAGTCTAAATAATTAATCCTATATATTTCTGTAGCTAATTAGATCTCATATAAATTCATATAATCTCTTTGTCCAATAGTGTGTCTTTATTTAAAAATACATGTGACAGCTTAGGCTTTTAGTCCCATATTTCTTTATAAGTTTCATTTACATCTAAACCTTCTCAATATTAACTCTCCACCTAACATGTTAACTTAAATGACCAATTTAACTTAGGAAAGACTACATGCCCTATGCAACAAAAGAAATAGAAAGCATTAATGCAATGCTAATGTAATTGAATTGGCTTAAGCCATATCATCCTTATGGTATCTACATGACTGAATCTTAGAGAATATAGTCCATGAGTAGATCATAATGAAAATTCTCCACCAAATTAGATTCCATGGATTGCAATGAAGTAATTCAAGAAATGACGTCATTTAAATAAAAAGAGAGCAAAGAATAACAAGAAGAGAGGTTGGAAAAATAATAACAAGGGTCTTTAATTAAATACTTAATTTTCCTTTTACTCACTTTTCATATGTGGGTTTTAAATTCTATCACGTCTTCTTCTTATTTTCTTTGGACAAGGTTGAGAATAAATTTGACCGAGCCTTGATCTGGTTGGATGTTTCGTAACAACTCTCAAGATCCTCAAATCTACACATCATCTTAAGAGATTGTATCATCATGTTCATGTATGACAACAAACTAGAGGGTGAATAGGGTTGATTTAAAGATTAAAACTTTTTTTGTTATGAAATTTGCAACTAAATTAAAGCAATTTAAAGTAAAAAATCAACTACTATTTAACACAATGAATCAAAGCAAATTACTAAACATATAACTTCTCATATAAATATATAATTAAGTGTGAGTGAAAAGAAATAACACTAATTATTTTTACGAGTATTTTACTACAAGGTGAGAACCATCTATTCAACAATTTTTCTTTAGAGCTTGAAGAGTCAAACCACAAGCAAGTTTAGGATCCAACATATTTTGATTTTTTTTCAATAGATCAGATTTAAAATGAAACCACGTCAAATCATTTTTCTTTCTCGGGTTTAGGATTAAACCACTGGGTTCGAACTCAAGGTGCATTCTTGTTACAAATTCCTAATTGAAAACCAACAAAAAGGGAACAATCCCAAAAGTGCAGACAAACAACTATAGACACTCAAGACAATCTCTCTATCACAAAATTAAGCAAAGTTATGAAAACAATGAAGCCTTGAAAAAATGAACAACAATAATGGAGGATTAGGAGATTTGAAAAATGAACAAAAGAAAAGTAATCTCTATAGATACTAAGCAATTGGAGATTAATTGCAATTTTTCAAGGAGATGATAGTTAGAATTTAAAGAGATCTTTGGCCTAAAAAAAAGTATTGAGGATTGGAAATGGCCCTTGGATGATAGTAGTAAAAGAAGGAAAGAATATATAGGATTGAAAATGGCTCGTGGGCATTTTTTTTCTAAGTTTTCAAAAATTTTAGTTTTTCTTCAAAAAATGTTAAATTCCATTCTCTTAATTTTGAAAAAAAGTCATACTTATTTAGGGCTACATGTTGCGATTTCTGGCAACAATTTCTTCATTTGATATCTAATTTGAGTGATTCAGAGTGCGTTAGAATTGTCTCCCTAAGCTCTATGATATGAACACTTTGATTAAAACACTAAGAACATCAATTGAATTTTTTTGTTATCATGAAAAGATAAATGATCAAAGATCTTCACATTAACAAATATAGAGGATGGATTTGTGTATGAATTATCTTAGCAAAATCCATCCAGAAATTGATCCATTATTCTTTAATGGTCATTTTAATATTGCTTACATATACACTTTCTGATAGAAGAAACTCCATCCCCACAAATGTTATCGACTATTGATGGTAACATATTAGCTTACCAAGGAAAATTTAGTTCATCTTCTCATGCCACCAACGATTAATCTATACATGAGGGGAGGTAACCTACTTAGCCACACTAGCACTGTAATGCTTAAAGTAGTTTAGAACAAGGGCTTTTTGAGGAGGAAGATGAAATTACTTTTCATAATGCTATAAGTAATGATGTTTTTATAAGTCAAGAGGTTAAATTAGTATCAAAATATCTTGAATAATATGTTATTTGACACTCTGAATGACCGAACACAGCAGTTTCTCTAATGGAAGAAGGTAGAAAATTTACTTTTTTCTTTTTTACAAATCTTAATTATTTGATACATAATTTAAAGCATTCACTAATTTTATTCAATTTTTTAATAAAATGTTTAGTAAATTACTAATCTGTGAATGCATTACATTAAACTAGTTAATATAATGCAGTGTGTGTATATAATAATACAAGTTTCATTCTTCATTAGTAAGACTCATGTGGCTCCATCCATGTGCAGTTAGGGATTCTCTGAGTGGCAGAAAGTAGAATTTTAGCAAAAGAGGGAGCTAGTGTAATTAATTTGGAATTATTCAAAGTCTTTAGCAAAGGGATTCTTTGTTGGTCAACAATGGTACAAACCAATGGAGGAAATGAAAAGTGTTGTTCCTAAAAGTTTGAATGATAACCCCACAAACTCACATTCATGTTTCATCCCTTAGATTCTTATTCCTTCTTAAACCCTTTTTCTTCTCCTATAAAAATAGGATTCCTACAACCGCTTAACTCCAAACCCAAGCACACTCACAATTGAACTCATTTTCCATCTTATTACTTCTCTTGATCTCTACACACCATGGGAGGCAACCACAGGCAAAAAAAGACTCATTCTTCCTTCTCCATCTTTAGCTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTTTATGAGCATGGTACCAATTGGGAGGATGTGCCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGTATCGATAGAAAGGCCAAAGATTACATCGATAGGATTTATAAAAATCGTGTCTTTGAAACCGAGCGTCAAACTGTCACTATTCATCCCAATGGACCTAATTCCAATGTGTAG

mRNA sequence

ATGTTAACCAGCTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTTTATGAGCATGGTACCAATTGGGAGGATGTGCCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGTATCGATAGAAAGGCCAAAGATTACATCGATAGGATTTATAAAAATCGTGTCTTTGAAACCGAGCGTCAAACTGTCACTATTCATCCCAATGGACCTAATTCCAATGTGTAG

Coding sequence (CDS)

ATGTTAACCAGCTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTTTATGAGCATGGTACCAATTGGGAGGATGTGCCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGTATCGATAGAAAGGCCAAAGATTACATCGATAGGATTTATAAAAATCGTGTCTTTGAAACCGAGCGTCAAACTGTCACTATTCATCCCAATGGACCTAATTCCAATGTGTAG

Protein sequence

MLTSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKNRVFETERQTVTIHPNGPNSNV*
Homology
[Close]
BLAST of Chy3G052390 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.9e-41
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 4  SFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKN 63
          SFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKN
Sbjct: 18 SFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKN 77

Query: 64 RVFETERQTVTIHPNGPNSNV 85
          RVFETERQTVTIHPNGPNSNV
Sbjct: 78 RVFETERQTVTIHPNGPNSNV 98

[Close]
BLAST of Chy3G052390 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-29
Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 0 

Query: 4  SFFKSKRGRKGDVYEHGTNWED-VPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYK 63
          SFFKSKRGRKGD Y+HG  W D +P S+KVWPSDEDK + W+AEPGIDRKAKDYIDRIY+
Sbjct: 17 SFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEPGIDRKAKDYIDRIYR 76

Query: 64 NRVFETERQTVTIHPNGPNSNV 85
          NRVFE+ERQTVTI PNG  SNV
Sbjct: 77 NRVFESERQTVTISPNGTKSNV 98

[Close]
BLAST of Chy3G052390 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 63/82 (76.83%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 4  SFFKSKRGRKGDVYEHGTNW-EDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYK 63
          SFFKS+RGRKGD Y+HG  W +++P S+KVWPSDEDK + WVAEPGIDRKAKDYIDRIY+
Sbjct: 17 SFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYR 76

Query: 64 NRVFETERQTVTIHPNGPNSNV 85
          NRVFE+ERQTVTI PNG  SNV
Sbjct: 77 NRVFESERQTVTISPNGTKSNV 98

[Close]
BLAST of Chy3G052390 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26
Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 0 

Query: 4  SFFKSKRGRKGDVYEH-GTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYK 63
          SFFKS+RGRKGD   H G+  +++P S KVWPSDEDK + WVAEPGIDRKAKDYIDRIY+
Sbjct: 18 SFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYR 77

Query: 64 NRVFETERQTVTIHPNGPNSNV 85
          NRVFE+ERQT+TI PNG  SNV
Sbjct: 78 NRVFESERQTITISPNGTKSNV 99

[Close]
BLAST of Chy3G052390 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 0 

Query: 4  SFFKSKRGRKGDVYEH-GTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYK 63
          SFFKS+RGRKGD   H G+  +++P S KVWPSDEDK + WVAEPGIDRKAKDYIDRIY+
Sbjct: 18 SFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYR 77

Query: 64 NRVFETERQTVTIHPNGPNSNV 85
          NRVFE+ERQTVTI PNG  SNV
Sbjct: 78 NRVFESERQTVTISPNGIKSNV 99

[Close]
BLAST of Chy3G052390 vs. NCBI nr
Match: KGN45873.1 (hypothetical protein Csa_005148 [Cucumis sativus])

HSP 1 Score: 178 bits (452), Expect = 2.53e-56
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 2  LTSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIY 61
          + SFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIY
Sbjct: 16 IFSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIY 75

Query: 62 KNRVFETERQTVTIHPNGPNSNV 84
          KNRVFETERQTVTIHPNGPNSNV
Sbjct: 76 KNRVFETERQTVTIHPNGPNSNV 98

[Close]
BLAST of Chy3G052390 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 139 bits (351), Expect = 6.46e-41
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 2  LTSFFKSKRGRKGDVYEHGTNWED-VPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRI 61
          + SFFKSKRGRKGD Y+HG  W D +P S+KVWPSDEDK + W+AEPGIDRKAKDYIDRI
Sbjct: 15 IFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEPGIDRKAKDYIDRI 74

Query: 62 YKNRVFETERQTVTIHPNGPNSNV 84
          Y+NRVFE+ERQTVTI PNG  SNV
Sbjct: 75 YRNRVFESERQTVTISPNGTKSNV 98

[Close]
BLAST of Chy3G052390 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (324), Expect = 8.70e-37
Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 2  LTSFFKSKRGRKGDVYEH-GTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRI 61
          + SFFKS+RGRKGD   H G+  +++P S KVWPSDEDK + WVAEPGIDRKAKDYIDRI
Sbjct: 16 IFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRI 75

Query: 62 YKNRVFETERQTVTIHPNGPNSNV 84
          Y+NRVFE+ERQT+TI PNG  SNV
Sbjct: 76 YRNRVFESERQTITISPNGTKSNV 99

[Close]
BLAST of Chy3G052390 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 129 bits (323), Expect = 1.24e-36
Identity = 61/84 (72.62%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 2  LTSFFKSKRGRKGDVYEH-GTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRI 61
          + SFFKS+RGRKGD   H G+  +++P S KVWPSDEDK + WVAEPGIDRKAKDYIDRI
Sbjct: 16 IFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEPGIDRKAKDYIDRI 75

Query: 62 YKNRVFETERQTVTIHPNGPNSNV 84
          Y+NRVFE+ERQTVTI PNG  SNV
Sbjct: 76 YRNRVFESERQTVTISPNGIKSNV 99

[Close]
BLAST of Chy3G052390 vs. NCBI nr
Match: KAE8646586.1 (hypothetical protein Csa_023592, partial [Cucumis sativus])

HSP 1 Score: 127 bits (320), Expect = 1.81e-36
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 0 

Query: 10 RGRKGDVYEHGTNW-EDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKNRVFET 69
          RGRKGD Y+HG  W +++P S+KVWPSDEDK + WVAEPGIDRKAKDYIDRIY+NRVFE+
Sbjct: 1  RGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFES 60

Query: 70 ERQTVTIHPNGPNSNV 84
          ERQTVTI PNG  SNV
Sbjct: 61 ERQTVTISPNGTKSNV 76

[Close]
BLAST of Chy3G052390 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 3.1e-11
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 2  LTSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIY 61
          L SFFK++R  +    E   +W+D   + K   SDEDK Y WVAEPGIDRKA  +I + +
Sbjct: 15 LFSFFKTRRSHR---VEADGSWDDFGYTRKAMASDEDKRY-WVAEPGIDRKASAFIAKFH 74

Query: 62 KNRVFETERQTVT 75
            RV E+ERQT++
Sbjct: 75 ATRVSESERQTLS 83

[Close]
BLAST of Chy3G052390 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.1e-11
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 18 EHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKNRVFETERQTV 74
          E   +W+DV  + K W SDEDK Y WVAEPGIDRKA  +I + + +RV E+ERQT+
Sbjct: 12 EADASWDDVIYTRKAWASDEDKRY-WVAEPGIDRKASAFIAKFHASRVSESERQTL 66

The following BLAST results are available for this feature:
BLAST of Chy3G052390 vs.
Match NameE-valueIdentityDescription
BLAST of Chy3G052390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8W03.9e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1[more]
A0A0A0K7Y22.0e-2978.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1[more]
A0A0A0KBW14.4e-2976.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1[more]
A0A5A7SWT92.7e-2673.17Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KAK63.5e-2674.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1[more]
BLAST of Chy3G052390 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45873.12.53e-5697.59hypothetical protein Csa_005148 [Cucumis sativus][more]
KGN45870.16.46e-4176.19hypothetical protein Csa_004960 [Cucumis sativus][more]
KAA0035003.18.70e-3771.43hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343... [more]
KGN45869.11.24e-3672.62hypothetical protein Csa_005516 [Cucumis sativus][more]
KAE8646586.11.81e-3676.32hypothetical protein Csa_023592, partial [Cucumis sativus][more]
BLAST of Chy3G052390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05858.13.1e-1147.95unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G26620.14.1e-1155.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR33511OS06G0632400 PROTEINcoord: 3..74
NoneNo IPR availablePANTHERPTHR33511:SF17RIBOSOMAL PROTEIN S12coord: 3..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy3G052390.1Chy3G052390.1mRNA