Chy2G047560 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGACTGGATTGTTTGATCTGGAGAAACAGTTCGCCTTCTATGGCGCTTATCACAGCAACCCAATGAACATTTTCATCCACGTTTTGTTTGTGTGGCCAATTTTCTTCACCAGTCTCATGTATTTGTATTTCACCCCTTCATTCTACACAATTCCCAAATCCCCTTGTGGGTTTGACCACGGCTTGGTTTTGAACTTCGGATTTTTTTTCACTTTAATGTATGCCGCATATTATGTTGTTTTCGATAAGAGAGCTGGGTCCATGGCTGCTTTGCTTTGTTTCGTTTGTTGGGTTGGAGCAAGCTTTATCGCTAATAGACTTGGTTATTCTCAGACTTGGAAGGTAATCAATCCCCCTCTTTCTCTTTAATTTGATTTCTGGGTTTTGTGTTTTTCAAGTAAATTAGTTTGTTTTCTATAGCTTACAGCATTTGGATTAGCTAATCATCTTGTTAATAATTTTCCTAATGGATCATTTGTTGAGTGGATTGAAATTCCCTTAATGGGTTTTCGTGTAAATGGGATTAGCGGCAAGTGATGGACACACCTAAATCTGATATTATCTGATTGGAATTTGGTCGATGTGTTAAAGTTTGATACCTCAAAGGAGTGTTTGTTTGTTGTAAATTTATTTCATATTTATTACATATCAGGTTGTACTGGCAGCTCAGTTGTTCTGTTGGACCAATCAGTTTATAGGCCATGGAGTATTTGAGGTAGACAGGTTACTTCATCTAAAGTAAATTGATTCCATCTCTTCTTTATTCATAACCCTCTTCATTTAATCTCTCCTCTGTTTTATAGAAACGAGCACCGGCTTTGTTAGACAATCTTGCACAAGCTTTTTTAATGGCTCCATTCTTTGTAGTTTTAGAGGTATTCTTTCTCTGTGTCTCCCCTATTATAAGAGTTGTTAGTGGTGTGGACAATGAAGCAACCCTGTTGTTTCTGATTTTTTTTTGGTTGCAGGTTCTTCAAAGTTTATTCAAATATGAACCATATCCTGGGTTTAGTGCGAGTGTGCAAGCAAAGATAAAAGCAGATATAAGAGAATGGAAAGAAAAGAAGGAAAAGCTGTCATAG ATGGGGAAGACTGGATTGTTTGATCTGGAGAAACAGTTCGCCTTCTATGGCGCTTATCACAGCAACCCAATGAACATTTTCATCCACGTTTTGTTTGTGTGGCCAATTTTCTTCACCAGTCTCATGTATTTGTATTTCACCCCTTCATTCTACACAATTCCCAAATCCCCTTGTGGGTTTGACCACGGCTTGGTTTTGAACTTCGGATTTTTTTTCACTTTAATGTATGCCGCATATTATGTTGTTTTCGATAAGAGAGCTGGGTCCATGGCTGCTTTGCTTTGTTTCGTTTGTTGGGTTGGAGCAAGCTTTATCGCTAATAGACTTGGTTATTCTCAGACTTGGAAGGTTGTACTGGCAGCTCAGTTGTTCTGTTGGACCAATCAGTTTATAGGCCATGGAGTATTTGAGAAACGAGCACCGGCTTTGTTAGACAATCTTGCACAAGCTTTTTTAATGGCTCCATTCTTTGTAGTTTTAGAGGTTCTTCAAAGTTTATTCAAATATGAACCATATCCTGGGTTTAGTGCGAGTGTGCAAGCAAAGATAAAAGCAGATATAAGAGAATGGAAAGAAAAGAAGGAAAAGCTGTCATAG ATGGGGAAGACTGGATTGTTTGATCTGGAGAAACAGTTCGCCTTCTATGGCGCTTATCACAGCAACCCAATGAACATTTTCATCCACGTTTTGTTTGTGTGGCCAATTTTCTTCACCAGTCTCATGTATTTGTATTTCACCCCTTCATTCTACACAATTCCCAAATCCCCTTGTGGGTTTGACCACGGCTTGGTTTTGAACTTCGGATTTTTTTTCACTTTAATGTATGCCGCATATTATGTTGTTTTCGATAAGAGAGCTGGGTCCATGGCTGCTTTGCTTTGTTTCGTTTGTTGGGTTGGAGCAAGCTTTATCGCTAATAGACTTGGTTATTCTCAGACTTGGAAGGTTGTACTGGCAGCTCAGTTGTTCTGTTGGACCAATCAGTTTATAGGCCATGGAGTATTTGAGAAACGAGCACCGGCTTTGTTAGACAATCTTGCACAAGCTTTTTTAATGGCTCCATTCTTTGTAGTTTTAGAGGTTCTTCAAAGTTTATTCAAATATGAACCATATCCTGGGTTTAGTGCGAGTGTGCAAGCAAAGATAAAAGCAGATATAAGAGAATGGAAAGAAAAGAAGGAAAAGCTGTCATAG MGKTGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPKSPCGFDHGLVLNFGFFFTLMYAAYYVVFDKRAGSMAALLCFVCWVGASFIANRLGYSQTWKVVLAAQLFCWTNQFIGHGVFEKRAPALLDNLAQAFLMAPFFVVLEVLQSLFKYEPYPGFSASVQAKIKADIREWKEKKEKLS* Homology
BLAST of Chy2G047560 vs. ExPASy Swiss-Prot
Match: O13737 (2-hydroxy-palmitic acid dioxygenase mpo1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mpo1 PE=3 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 3.6e-18 Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 0
BLAST of Chy2G047560 vs. ExPASy Swiss-Prot
Match: P25338 (2-hydroxy-palmitic acid dioxygenase MPO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPO1 PE=1 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 5.1e-17 Identity = 61/183 (33.33%), Postives = 88/183 (48.09%), Query Frame = 0
BLAST of Chy2G047560 vs. ExPASy TrEMBL
Match: A0A5A7UQ13 (Putative endoplasmic reticulum membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002550 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109 Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Chy2G047560 vs. ExPASy TrEMBL
Match: A0A1S3BV50 (uncharacterized endoplasmic reticulum membrane protein YGL010W OS=Cucumis melo OX=3656 GN=LOC103494003 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109 Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Chy2G047560 vs. ExPASy TrEMBL
Match: A0A0A0LP54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009840 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.7e-108 Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0
BLAST of Chy2G047560 vs. ExPASy TrEMBL
Match: A0A6J1F4N0 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita moschata OX=3662 GN=LOC111440831 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 6.4e-103 Identity = 183/198 (92.42%), Postives = 192/198 (96.97%), Query Frame = 0
BLAST of Chy2G047560 vs. ExPASy TrEMBL
Match: A0A6J1IBP8 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Cucurbita maxima OX=3661 GN=LOC111471498 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100 Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 0
BLAST of Chy2G047560 vs. NCBI nr
Match: XP_008453216.1 (PREDICTED: uncharacterized endoplasmic reticulum membrane protein YGL010W [Cucumis melo] >KAA0057952.1 putative endoplasmic reticulum membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 407 bits (1047), Expect = 1.46e-143 Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Chy2G047560 vs. NCBI nr
Match: XP_004138174.1 (uncharacterized endoplasmic reticulum membrane protein YGL010W [Cucumis sativus] >KGN63680.1 hypothetical protein Csa_014278 [Cucumis sativus]) HSP 1 Score: 404 bits (1038), Expect = 3.45e-142 Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0
BLAST of Chy2G047560 vs. NCBI nr
Match: XP_038880038.1 (2-hydroxy-palmitic acid dioxygenase MPO1 [Benincasa hispida]) HSP 1 Score: 391 bits (1005), Expect = 3.72e-137 Identity = 187/198 (94.44%), Postives = 194/198 (97.98%), Query Frame = 0
BLAST of Chy2G047560 vs. NCBI nr
Match: XP_022933403.1 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita moschata] >KAG7021523.1 SPAC16E8.02 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 385 bits (990), Expect = 7.20e-135 Identity = 183/198 (92.42%), Postives = 192/198 (96.97%), Query Frame = 0
BLAST of Chy2G047560 vs. NCBI nr
Match: XP_023531593.1 (uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 378 bits (971), Expect = 5.48e-132 Identity = 181/198 (91.41%), Postives = 191/198 (96.46%), Query Frame = 0
BLAST of Chy2G047560 vs. TAIR 10
Match: AT1G18720.1 (Protein of unknown function (DUF962) ) HSP 1 Score: 250.8 bits (639), Expect = 9.5e-67 Identity = 127/199 (63.82%), Postives = 153/199 (76.88%), Query Frame = 0
BLAST of Chy2G047560 vs. TAIR 10
Match: AT1G74440.1 (Protein of unknown function (DUF962) ) HSP 1 Score: 248.1 bits (632), Expect = 6.1e-66 Identity = 122/200 (61.00%), Postives = 152/200 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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