Chy2G046280 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G046280
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 27489141 .. 27491349 (-)
RNA-Seq Expression	Chy2G046280
Synteny	Chy2G046280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTTATCTAAAAAGTTTCATGTATCCAAATTATTTTTCACTCATTTATAATAAATACCACATCTGTGTTCAAGTTACAAAGCTGATCCTCCCTTATATAGCTTCTTCTTCTTGAAAGAAAAAGAAAAAAAAAAGATTATCTTCTTCAATTATGGAGGAAAATCTACCTCCTGGATTCAGATTTCACCCAACTGATGAAGAACTCATTTCTTATTATCTCACTCAAAAACTTTCTGATTCTTCTTTCACTTCTAAAGCAATTGGAGTTGTGGATCTCAACAAGAATGAACCTTGGGATCTTCCAGGTAATTCATATATATTATTCATTATTATTCTTTTACGTTTTTATTGAAGTGTTTGATATAATTAATTAAGTTGTTTATCGTTATTGATCATCAGCTAAAGCTACGATGGGAGAGAAAGAGTGGTACTTTTTCAGCTTACGAGATCGAAAATACCCAACCGGGCTTCGAACCAATCGAGCGACGGAGGCAGGTTATTGGAAGACGACGGGGAAAGACAAGGAAATCTTTGGCAGTGTTGGTCATGCTTTGGTTGGAATGAAAAAAACTCTTGTGTTTTACAAGGGAAGAGCTCCTCGAGGTGAGAAAAGTAATTGGGTTATGCACGAATACCGCCAACAAAGTAGCCATTTTTTCAAACCCTCCAAGGTATGTAACCAAAACCAGCACGTATATATCTGTTTAGTCCTTAGACTTATTTTTCTACTTCATTCTTATATATTTTAGCTAGGGTTGTTTTTATTCCAATGAGCTTACTGGGTAGGTCTTTGTCATTTTAAATTCAATCGAGTTAATCAAATACATATCTTGCAAAACATATGTCCTTAATTACTCAAAATTAGTTTGACAATAATTCTTAATCATGATGTAAGGCAAGATTTGAAAATGGTTAAAAGTGGTTAAGAAAATGTAAAAATCCAACCTAATATAGATTGAAAACATAAAACTAAAAACGAAATCATCTTCAAAACAAAACCTTAAGAATATAATATTGTACTTTGTTTAAAATCAAACCCATAATACAATGCACATTATAAGAAAACGTTGTCTTGAAGATATGGAGAAAGGAAAAAAGAAACAAAAGTTATTGTAAAATCATTTAAAGTTCTTGAAATTTTCAATTATGGTTGTGTTAATTAATTAATTAATCTGTTTTTTTGTTTGTAATTTCAGGAAGAATGGGTAGTTTGCAGGGTATTTCAGAAACAAAATACACCAAAAAAACCACAACAATCATCATCATCTCAACCATCTCTTTCATCTCCTTGTGATACAAATTCAATTGTCAATGAATTTGGAGATCATATTGAATTATCAAACTTCAACAATAATAATATTATTTCATCTCAAACATATGAAAACAACAACATGATCAATAACAACAATAATAATAACATGATGAATATGAATATGAATTTGAATTTGAATAATTGGGTTTCACCAACAAATGAAAGCCTAATTCCTTCACTTTCATGGCCACTTAATTCCAATCTTCTAACTTCTTCGAATAATCTTTCTATGAATTCTCTTCTTCTCAAAGCATTGCAACTTAGAACCTTTCAACAACAAAGGGATAATGTCTTGGCTTCTTCTTCTTCTAATACTTTTAATAATAATATTCATGATCATCATCATCAAGCTGCCAATATTGTTCATTCTCAATTTGGAACAACAAATGACCATTTGAGCTGCTTCCAACCTTCTTCGTCTTCTAAAGTTTTTGAACCTTCATCACAGCAACAACAAGAGGAGCAACCATTGAACTTGGACTCCCTATGGTGAAACTATATGTTGATCTTACGAATCATTAGTTCACTCAATTAATGTTTATGTGAAGAATATGTAATGTGACTAACCCTCTTCTTTGAACTTTTGTAATATGTCATTTTCAATAAGGGAAGTTTTAGGGGAGATCATATGTAATTGTAACTTTGTCAAAATTGGGGTGTATCATTCTGATGTGGAGTTTTAGGGCTTAGTTTTAATTTCTCAAGTCATATTTAGGTAAAATGTTGTATGTTTAATATGATGATGTTGAAGTTCAATGTTTATAAGGATTGTGGGAAAAACCCCAAGTCCTTTGTTTCAAATTATTAAATCATTGTGTTAGGTGGTTATATTCTCATGGTATCATCAACAAATCCTTTTATGTTATCATATTGGAGAATGGAAGGGGATTAAATTC

mRNA sequence

GGTTTTATCTAAAAAGTTTCATGTATCCAAATTATTTTTCACTCATTTATAATAAATACCACATCTGTGTTCAAGTTACAAAGCTGATCCTCCCTTATATAGCTTCTTCTTCTTGAAAGAAAAAGAAAAAAAAAAGATTATCTTCTTCAATTATGGAGGAAAATCTACCTCCTGGATTCAGATTTCACCCAACTGATGAAGAACTCATTTCTTATTATCTCACTCAAAAACTTTCTGATTCTTCTTTCACTTCTAAAGCAATTGGAGTTGTGGATCTCAACAAGAATGAACCTTGGGATCTTCCAGCTAAAGCTACGATGGGAGAGAAAGAGTGGTACTTTTTCAGCTTACGAGATCGAAAATACCCAACCGGGCTTCGAACCAATCGAGCGACGGAGGCAGGTTATTGGAAGACGACGGGGAAAGACAAGGAAATCTTTGGCAGTGTTGGTCATGCTTTGGTTGGAATGAAAAAAACTCTTGTGTTTTACAAGGGAAGAGCTCCTCGAGGTGAGAAAAGTAATTGGGTTATGCACGAATACCGCCAACAAAGTAGCCATTTTTTCAAACCCTCCAAGGAAGAATGGGTAGTTTGCAGGGTATTTCAGAAACAAAATACACCAAAAAAACCACAACAATCATCATCATCTCAACCATCTCTTTCATCTCCTTGTGATACAAATTCAATTGTCAATGAATTTGGAGATCATATTGAATTATCAAACTTCAACAATAATAATATTATTTCATCTCAAACATATGAAAACAACAACATGATCAATAACAACAATAATAATAACATGATGAATATGAATATGAATTTGAATTTGAATAATTGGGTTTCACCAACAAATGAAAGCCTAATTCCTTCACTTTCATGGCCACTTAATTCCAATCTTCTAACTTCTTCGAATAATCTTTCTATGAATTCTCTTCTTCTCAAAGCATTGCAACTTAGAACCTTTCAACAACAAAGGGATAATGTCTTGGCTTCTTCTTCTTCTAATACTTTTAATAATAATATTCATGATCATCATCATCAAGCTGCCAATATTGTTCATTCTCAATTTGGAACAACAAATGACCATTTGAGCTGCTTCCAACCTTCTTCGTCTTCTAAAGTTTTTGAACCTTCATCACAGCAACAACAAGAGGAGCAACCATTGAACTTGGACTCCCTATGGTGAAACTATATGTTGATCTTACGAATCATTAGTTCACTCAATTAATGTTTATGTGAAGAATATGTAATGTGACTAACCCTCTTCTTTGAACTTTTGTAATATGTCATTTTCAATAAGGGAAGTTTTAGGGGAGATCATATGTAATTGTAACTTTGTCAAAATTGGGGTGTATCATTCTGATGTGGAGTTTTAGGGCTTAGTTTTAATTTCTCAAGTCATATTTAGGTAAAATGTTGTATGTTTAATATGATGATGTTGAAGTTCAATGTTTATAAGGATTGTGGGAAAAACCCCAAGTCCTTTGTTTCAAATTATTAAATCATTGTGTTAGGTGGTTATATTCTCATGGTATCATCAACAAATCCTTTTATGTTATCATATTGGAGAATGGAAGGGGATTAAATTC

Coding sequence (CDS)

GGTTTTATCTAAAAAGTTTCATGTATCCAAATTATTTTTCACTCATTTATAATAAATACCACATCTGTGTTCAAGTTACAAAGCTGATCCTCCCTTATATAGCTTCTTCTTCTTGAAAGAAAAAGAAAAAAAAAAGATTATCTTCTTCAATTATGGAGGAAAATCTACCTCCTGGATTCAGATTTCACCCAACTGATGAAGAACTCATTTCTTATTATCTCACTCAAAAACTTTCTGATTCTTCTTTCACTTCTAAAGCAATTGGAGTTGTGGATCTCAACAAGAATGAACCTTGGGATCTTCCAGCTAAAGCTACGATGGGAGAGAAAGAGTGGTACTTTTTCAGCTTACGAGATCGAAAATACCCAACCGGGCTTCGAACCAATCGAGCGACGGAGGCAGGTTATTGGAAGACGACGGGGAAAGACAAGGAAATCTTTGGCAGTGTTGGTCATGCTTTGGTTGGAATGAAAAAAACTCTTGTGTTTTACAAGGGAAGAGCTCCTCGAGGTGAGAAAAGTAATTGGGTTATGCACGAATACCGCCAACAAAGTAGCCATTTTTTCAAACCCTCCAAGGAAGAATGGGTAGTTTGCAGGGTATTTCAGAAACAAAATACACCAAAAAAACCACAACAATCATCATCATCTCAACCATCTCTTTCATCTCCTTGTGATACAAATTCAATTGTCAATGAATTTGGAGATCATATTGAATTATCAAACTTCAACAATAATAATATTATTTCATCTCAAACATATGAAAACAACAACATGATCAATAACAACAATAATAATAACATGATGAATATGAATATGAATTTGAATTTGAATAATTGGGTTTCACCAACAAATGAAAGCCTAATTCCTTCACTTTCATGGCCACTTAATTCCAATCTTCTAACTTCTTCGAATAATCTTTCTATGAATTCTCTTCTTCTCAAAGCATTGCAACTTAGAACCTTTCAACAACAAAGGGATAATGTCTTGGCTTCTTCTTCTTCTAATACTTTTAATAATAATATTCATGATCATCATCATCAAGCTGCCAATATTGTTCATTCTCAATTTGGAACAACAAATGACCATTTGAGCTGCTTCCAACCTTCTTCGTCTTCTAAAGTTTTTGAACCTTCATCACAGCAACAACAAGAGGAGCAACCATTGAACTTGGACTCCCTATGGTGAAACTATATGTTGATCTTACGAATCATTAGTTCACTCAATTAATGTTTATGTGAAGAATATGTAATGTGACTAACCCTCTTCTTTGAACTTTTGTAATATGTCATTTTCAATAAGGGAAGTTTTAGGGGAGATCATATGTAATTGTAACTTTGTCAAAATTGGGGTGTATCATTCTGATGTGGAGTTTTAGGGCTTAGTTTTAATTTCTCAAGTCATATTTAGGTAAAATGTTGTATGTTTAATATGATGATGTTGAAGTTCAATGTTTATAAGGATTGTGGGAAAAACCCCAAGTCCTTTGTTTCAAATTATTAAATCATTGTGTTAGGTGGTTATATTCTCATGGTATCATCAACAAATCCTTTTATGTTATCATATTGGAGAATGGAAGGGGATTAAATTC

Protein sequence

GFI*KVSCIQIIFHSFIINTTSVFKLQS*SSLI*LLLLERKRKKKDYLLQLWRKIYLLDSDFTQLMKNSFLIISLKNFLILLSLLKQLELWISTRMNLGIFQLKLRWERKSGTFSAYEIENTQPGFEPIERRRQVIGRRRGKTRKSLAVLVMLWLE*KKLLCFTREELLEVRKVIGLCTNTANKVAIFSNPPRKNG*FAGYFRNKIHQKNHNNHHHLNHLFHLLVIQIQLSMNLEIILNYQTSTIIILFHLKHMKTTT*SITTIIIT**I*I*I*I*IIGFHQQMKA*FLHFHGHLIPIF*LLRIIFL*ILFFSKHCNLEPFNNKGIMSWLLLLLILLIIIFMIIIIKLPILFILNLEQQMTI*AASNLLRLLKFLNLHHSNNKRSNH*TWTPYGETIC*SYESLVHSINVYVKNM*CD*PSSLNFCNMSFSIREVLGEIICNCNFVKIGVYHSDVEF*GLVLISQVIFR*NVVCLI**C*SSMFIRIVGKTPSPLFQIIKSLC*VVIFSWYHQQILLCYHIGEWKGIKF

Homology

[Close]

BLAST of Chy2G046280 vs. ExPASy TrEMBL
Match: A0A2P2QVG9 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.6e-07
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 90  LWISTRMNLGIFQLKLRWERKSGTFSAYEIENTQPGFEPIERRRQVIGRRRGKTR 145
           +WIST +  GI+QL+ R ERKSGTFS  EIE+T+ G +PIE+ R+ IGRRR +TR
Sbjct: 1   MWISTSVIHGIYQLRPRLERKSGTFSVPEIESTRMGLDPIEQPRRGIGRRRAQTR 55

The following BLAST results are available for this feature:

BLAST of Chy2G046280 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G046280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P2QVG9	4.6e-07	60.00	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of Chy2G046280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of Chy2G046280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G046280.1	Chy2G046280.1	mRNA