Chy2G040100 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G040100
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH02: 18341933 .. 18343954 (-)
RNA-Seq Expression	Chy2G040100
Synteny	Chy2G040100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAAGCAGAGATACTTGGACTGCAGAAGGATTACTTTTGACCTTCTTGCTACCTCTGCCTCTGGTTTACCAGCGGCGCCTTCGAATTCCAAAGGTTCACTTTCTTCACTCGTACCTCTTTTCACATCTTCTTCTATAAATATATATATATAGATAGTATACTTCTTGCACTTTTCTGATCTCAATACACAATTCCATTTGCAATTATCTTCCTAATCATCAATCACTTCTCAATTTCATGTGAGTTCGTTGCATTTCATTTCTGCCTTCTTCTCGTCCCCCTACCATGTTCTGGAATTATAAGGAAATTAGTGACTCAAATTCTACTTTAGAAGCAAGTTACGGCAAGTTAATTCAGTATCCTCTTTGAGCTTATTTACATTTGTCGCTTATACGATCTGAATATGATTTACCTCTTCTACCTCCATAAGTAGTGACGTAGCTGCTACTCACGCTACTTTGCCGTATTAGCTTATTTTCTCACAAATTCTATTTTCAGATTATCAAAGTCTTTACCGTGTTCTTGAAGCCTGCAGACTCTTCCACATGAATTCCAAAACTGTTATCGAAACGCATGCACGAATTATTAAATTTGGATATGGAAACTACCCTACTCTCATCTCCTCTCTAGTATCTACTTATCAACGTGTTGGTTGCCTTAATCGGGTTCATCAACTTCTTGATATACTCTGCCCTAAGCAGCTTGATTTAGTTGCAATGAACTTACTCATTGGAAACTTTATGAAAATCGGGGAGTGCAAATTTGCTAAAAAGGTATTTTATAAAATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTAAAAAATGCACGGTATGATGAGGCATTTAGATTCTTTAGACGGATGCTCACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCTATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAAGTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCAGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAATGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTGGTTTAATTGACCGTGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGATCTTTATAGTCGAGCTGGGTTTCTGGACGAGGCCTATTCTCTAATTCTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCATCGTAAGAGTGGGGATTATGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGCGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATATCAAAGAACCTGCGGATCTGTGATGATTGTCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

mRNA sequence

ATGCTGAAGCAGAGATACTTGGACTGCAGAAGGATTACTTTTGACCTTCTTGCTACCTCTGCCTCTGGTTTACCAGCGGCGCCTTCGAATTCCAAAGATTATCAAAGTCTTTACCGTGTTCTTGAAGCCTGCAGACTCTTCCACATGAATTCCAAAACTGTTATCGAAACGCATGCACGAATTATTAAATTTGGATATGGAAACTACCCTACTCTCATCTCCTCTCTAGTATCTACTTATCAACGTGTTGGTTGCCTTAATCGGGTTCATCAACTTCTTGATATACTCTGCCCTAAGCAGCTTGATTTAGTTGCAATGAACTTACTCATTGGAAACTTTATGAAAATCGGGGAGTGCAAATTTGCTAAAAAGGTATTTTATAAAATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTAAAAAATGCACGGTATGATGAGGCATTTAGATTCTTTAGACGGATGCTCACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCTATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAAGTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCAGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAATGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTGGTTTAATTGACCGTGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGATCTTTATAGTCGAGCTGGGTTTCTGGACGAGGCCTATTCTCTAATTCTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCATCGTAAGAGTGGGGATTATGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGCGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATATCAAAGAACCTGCGGATCTGTGATGATTGTCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

Coding sequence (CDS)

ATGCTGAAGCAGAGATACTTGGACTGCAGAAGGATTACTTTTGACCTTCTTGCTACCTCTGCCTCTGGTTTACCAGCGGCGCCTTCGAATTCCAAAGATTATCAAAGTCTTTACCGTGTTCTTGAAGCCTGCAGACTCTTCCACATGAATTCCAAAACTGTTATCGAAACGCATGCACGAATTATTAAATTTGGATATGGAAACTACCCTACTCTCATCTCCTCTCTAGTATCTACTTATCAACGTGTTGGTTGCCTTAATCGGGTTCATCAACTTCTTGATATACTCTGCCCTAAGCAGCTTGATTTAGTTGCAATGAACTTACTCATTGGAAACTTTATGAAAATCGGGGAGTGCAAATTTGCTAAAAAGGTATTTTATAAAATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTAAAAAATGCACGGTATGATGAGGCATTTAGATTCTTTAGACGGATGCTCACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCTATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAAGTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCAGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAATGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTGGTTTAATTGACCGTGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGATCTTTATAGTCGAGCTGGGTTTCTGGACGAGGCCTATTCTCTAATTCTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCATCGTAAGAGTGGGGATTATGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGCGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATATCAAAGAACCTGCGGATCTGTGATGATTGTCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

Protein sequence

MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW*

Homology

[Close]

BLAST of Chy2G040100 vs. ExPASy Swiss-Prot
Match: Q9FI49 (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 555.1 bits (1429), Expect = 8.9e-157
Identity = 269/514 (52.33%), Postives = 367/514 (71.40%), Query Frame = 0


Query: 26  AAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGC 85
           ++ SN  D+  L +VLE+C+    NSK V++ HA+I K GYG YP+L+ S V+ Y+R   
Sbjct: 22  SSASNLTDHGMLKQVLESCKA-PSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNR 81

Query: 86  LNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCV 145
                +LL         +  +NL+I + MKIGE   AKKV      ++V+TWN +IGG V
Sbjct: 82  SYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYV 141

Query: 146 KNARYDEAFRFFRRMLT-SNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNS 205
           +N +Y+EA +  + ML+ ++I+P+ F+FAS L ACA+LG   +  WVH+ M    IELN+
Sbjct: 142 RNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNA 201

Query: 206 LLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHE 265
           +LS AL+D Y+KCG I  ++E+F ++  +D S+WN MI G A HGLA +A+ +F  ME E
Sbjct: 202 ILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE 261

Query: 266 NVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDE 325
           +V PD+ITFLG+LT C+H GL++ G+ YF LM   +SIQP+LEHYG MVDL  RAG + E
Sbjct: 262 HVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKE 321

Query: 326 AYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSHRKSGDYVLLSNIYCSLNR 385
           AY LI +MPIEPDVV WR+LLS  R YKN +L E+AI N+S  KSGDYVLLSNIY S  +
Sbjct: 322 AYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKK 381

Query: 386 WKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRT 445
           W+ A+ VR++M    +RK +GKSW+E GG I  FK+GD  H E+ AI KVL  L+++T++
Sbjct: 382 WESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKS 441

Query: 446 EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTW 505
           +G++  T+LV MD+SEEEKEENL++HSEK+ALAY ILK+SPG +I I KN+R+C DCH W
Sbjct: 442 QGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNW 501

Query: 506 IKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           IK VS++L RVI++RDRIRFH+FE G+CSC D W
Sbjct: 502 IKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534

[Close]

BLAST of Chy2G040100 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 4.5e-108
Identity = 199/498 (39.96%), Postives = 293/498 (58.84%), Query Frame = 0


Query: 56  ETHARIIKFGYGNYPTLISSLVSTYQRVGCL---------NRVHQLLDILCPKQL---DL 115
           + H   +K+G+G    ++S+LV  Y   G +         N + + + ++  ++    ++
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208

Query: 116 VAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTS 175
           V  N++I  +M++G+CK A+ +F KM  R VV+WN++I G   N  + +A   FR M   
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268

Query: 176 NIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIA 235
           +I+P+  T  S+L A ++LG+     W+H       I ++ +L  ALID YSKCG I+ A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328

Query: 236 KEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHG 295
             +F  +P  +   W+ MI G AIHG A DA+  F +M    V P  + ++ +LTAC+HG
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388

Query: 296 GLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRT 355
           GL++ GRRYF  M S   ++P++EHYG MVDL  R+G LDEA   IL MPI+PD V W+ 
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448

Query: 356 LLSGCRIYKNHKLAE-VA--IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRV 415
           LL  CR+  N ++ + VA  + +M    SG YV LSN+Y S   W E   +R  MK   +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508

Query: 416 RKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISE 475
           RK  G S I++ G +  F   D  HP++  I  +L  +  + R  GY P+T  V +++ E
Sbjct: 509 RKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE 568

Query: 476 EEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRD 535
           E+KE  L +HSEK+A A+ ++ TSPG  I I KNLRIC+DCH+ IKL+S+V  R I VRD
Sbjct: 569 EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 628

Query: 536 RIRFHQFEGGMCSCGDRW 539
           R RFH F+ G CSC D W
Sbjct: 629 RKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of Chy2G040100 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 8.5e-107
Identity = 200/518 (38.61%), Postives = 301/518 (58.11%), Query Frame = 0


Query: 26  AAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGC 85
           +AP N+  + SL   L+AC       +T  + HA+I K GY N    ++SL+++Y   G 
Sbjct: 110 SAPHNAYTFPSL---LKACSNLSAFEETT-QIHAQITKLGYENDVYAVNSLINSYAVTGN 169

Query: 86  LNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCV 145
               H L D +   + D V+ N +I  ++K G+   A  +F KM  ++ ++W ++I G V
Sbjct: 170 FKLAHLLFDRI--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 229

Query: 146 KNARYDEAFRFFRRMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSL 205
           +     EA + F  M  S+++PD  + A+ L+ACAQLGA     W+H+ + + +I ++S+
Sbjct: 230 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 289

Query: 206 LSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHEN 265
           L C LID Y+KCG ++ A E+F NI       W  +I G A HG   +A+S F+ M+   
Sbjct: 290 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 349

Query: 266 VLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEA 325
           + P+ ITF  VLTAC++ GL++ G+  F  M+  Y+++P +EHYG +VDL  RAG LDEA
Sbjct: 350 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 409

Query: 326 YSLILTMPIEPDVVTWRTLLSGCRIYKN----HKLAEVAIANMSHRKSGDYVLLSNIYCS 385
              I  MP++P+ V W  LL  CRI+KN     ++ E+ IA +     G YV  +NI+  
Sbjct: 410 KRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-IDPYHGGRYVHKANIHAM 469

Query: 386 LNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKR 445
             +W +A   R++MK   V K  G S I L GT   F +GDR HPE + I+     + ++
Sbjct: 470 DKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRK 529

Query: 446 TRTEGYMPVTELVFMD-ISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDD 505
               GY+P  E + +D + ++E+E  +  HSEK+A+ Y ++KT PG  I I KNLR+C D
Sbjct: 530 LEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKD 589

Query: 506 CHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           CH   KL+S++  R IV+RDR RFH F  G CSCGD W
Sbjct: 590 CHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

[Close]

BLAST of Chy2G040100 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 3.2e-106
Identity = 198/492 (40.24%), Postives = 300/492 (60.98%), Query Frame = 0


Query: 57  THARIIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKI 116
           THA+I+ FG    P + +SL++ Y   G L    ++ D    K  DL A N ++  + K 
Sbjct: 84  THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAWNSVVNAYAKA 143

Query: 117 GECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSN-----IQPDGFT 176
           G    A+K+F +MP R+V++W+ +I G V   +Y EA   FR M         ++P+ FT
Sbjct: 144 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 203

Query: 177 FASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNI- 236
            +++L+AC +LGA     WVHA + +  +E++ +L  ALID Y+KCGS++ AK +F+ + 
Sbjct: 204 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 263

Query: 237 PHSDTSVWNVMIKGLAIHGLAMDALSLFLRM-EHENVLPDAITFLGVLTACNHGGLIDRG 296
              D   ++ MI  LA++GL  +   LF  M   +N+ P+++TF+G+L AC H GLI+ G
Sbjct: 264 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 323

Query: 297 RRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCR 356
           + YF++M   + I P ++HYG MVDLY R+G + EA S I +MP+EPDV+ W +LLSG R
Sbjct: 324 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 383

Query: 357 IYKNHKLAEVA---IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGK 416
           +  + K  E A   +  +    SG YVLLSN+Y    RW E + +R  M++  + K  G 
Sbjct: 384 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 443

Query: 417 SWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEEN 476
           S++E+ G +  F  GD    ES+ I  +L  +M+R R  GY+  T+ V +D++E++KE  
Sbjct: 444 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 503

Query: 477 LSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQ 536
           LS+HSEK+A+A+ ++KT PG  + I KNLRIC DCH  +K++S++  R IVVRD  RFH 
Sbjct: 504 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 563

Query: 537 FEGGMCSCGDRW 539
           F  G CSC D W
Sbjct: 564 FRDGSCSCRDFW 573

[Close]

BLAST of Chy2G040100 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 386.0 bits (990), Expect = 7.2e-106
Identity = 190/440 (43.18%), Postives = 276/440 (62.73%), Query Frame = 0


Query: 103 LVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLT 162
           +   N L+  +   G+   A KVF KMP +D+V WNS+I G  +N + +EA   +  M +
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215

Query: 163 SNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQI 222
             I+PDGFT  S+L+ACA++GA +    VH  M +  +  N   S  L+D Y++CG ++ 
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275

Query: 223 AKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEH-ENVLPDAITFLGVLTACN 282
           AK +F  +   ++  W  +I GLA++G   +A+ LF  ME  E +LP  ITF+G+L AC+
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335

Query: 283 HGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTW 342
           H G++  G  YF  M+  Y I+P++EH+G MVDL +RAG + +AY  I +MP++P+VV W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395

Query: 343 RTLLSGCRIYKNHKLAEVA---IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKIN 402
           RTLL  C ++ +  LAE A   I  +    SGDYVLLSN+Y S  RW + + +RK M  +
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455

Query: 403 RVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDI 462
            V+K  G S +E+G  +  F  GD+ HP+SDAI   L  +  R R+EGY+P    V++D+
Sbjct: 456 GVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDV 515

Query: 463 SEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVV 522
            EEEKE  + +HSEK+A+A+ ++ T   + I++ KNLR+C DCH  IKLVS+V  R IVV
Sbjct: 516 EEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVV 575

Query: 523 RDRIRFHQFEGGMCSCGDRW 539
           RDR RFH F+ G CSC D W
Sbjct: 576 RDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Chy2G040100 vs. ExPASy TrEMBL
Match: A0A0A0LXZ9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G666990 PE=3 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 527/538 (97.96%), Postives = 533/538 (99.07%), Query Frame = 0


Query: 1   MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
           MLKQRYLDCRRITF LLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR
Sbjct: 1   MLKQRYLDCRRITFALLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60

Query: 61  IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
           IIKFGYGNYPTLI+SLVSTYQRVGCLNRVHQLLDILC KQLDLVAMNLLIGNFMKIGECK
Sbjct: 61  IIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECK 120

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
           FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFASILNACA
Sbjct: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACA 180

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
           QLGAPSNTHWVHAQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV
Sbjct: 181 QLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240

Query: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
           MIKGLAIHGLAMDALSLFLRMEHE+VLPDAITFLGVLTACNHG LID GRRYFELMKSHY
Sbjct: 241 MIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHY 300

Query: 301 SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
           SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMPIEPDVVTWRTLLSGCRIYKNHKLAEVA
Sbjct: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360

Query: 361 IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
           IANMS RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS
Sbjct: 361 IANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420

Query: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
           GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480

Query: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Chy2G040100 vs. ExPASy TrEMBL
Match: A0A5D3BAU8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00030 PE=3 SV=1)

HSP 1 Score: 1045.0 bits (2701), Expect = 1.1e-301
Identity = 508/538 (94.42%), Postives = 525/538 (97.58%), Query Frame = 0


Query: 1    MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
            MLKQRYLDCRRIT  LLATSAS LPAAPSN  DYQ+L+RVLEACRLF MNSKTVIETHAR
Sbjct: 605  MLKQRYLDCRRITCALLATSASALPAAPSNFTDYQTLHRVLEACRLFPMNSKTVIETHAR 664

Query: 61   IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
            IIKFGYGNYPTLI+SLVSTYQ VGCLNRVH+LLDILC K LDLVAMNLLIGNFMKIGECK
Sbjct: 665  IIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGNFMKIGECK 724

Query: 121  FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
            FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFAS+LNACA
Sbjct: 725  FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACA 784

Query: 181  QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
            QLGAPSNTHWV AQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNV
Sbjct: 785  QLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNV 844

Query: 241  MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
            MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLG+LTACNHGGLID GRRYFELM+S Y
Sbjct: 845  MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRY 904

Query: 301  SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
            SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMP+EPDVVTWRTLLSGC+IYKNHKLAEVA
Sbjct: 905  SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPLEPDVVTWRTLLSGCKIYKNHKLAEVA 964

Query: 361  IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
            IANMSHRKSGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKS
Sbjct: 965  IANMSHRKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKS 1024

Query: 421  GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
            GDRLHPESDAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 1025 GDRLHPESDAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 1084

Query: 481  LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
            LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 1085 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 1142

[Close]

BLAST of Chy2G040100 vs. ExPASy TrEMBL
Match: A0A1S4DV22 (pentatricopeptide repeat-containing protein At5g50990 OS=Cucumis melo OX=3656 GN=LOC103487281 PE=3 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 5.2e-301
Identity = 508/538 (94.42%), Postives = 524/538 (97.40%), Query Frame = 0


Query: 1   MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
           MLKQRYLDCRRIT  LLATSAS LPAAPSN  DYQ+L+RVLEACRLF MNSKTVIETHAR
Sbjct: 1   MLKQRYLDCRRITCALLATSASALPAAPSNFTDYQTLHRVLEACRLFPMNSKTVIETHAR 60

Query: 61  IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
           IIKFGYGNYPTLI+SLVSTYQ VGCLNRVH+LLDILC K LDLVAMNLLIGNFMKIGECK
Sbjct: 61  IIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGNFMKIGECK 120

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
           FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFAS+LNACA
Sbjct: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACA 180

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
           QLGAPSNTHWV AQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNV
Sbjct: 181 QLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNV 240

Query: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
           MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLG+LTACNHGGLID GRRYFELM+S Y
Sbjct: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRY 300

Query: 301 SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
           SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMPIEPDVVTWRTLLSGC+IYKNHKLAEVA
Sbjct: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVA 360

Query: 361 IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
           IANMSH KSGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKS
Sbjct: 361 IANMSHCKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKS 420

Query: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
           GDRLHPESDAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 421 GDRLHPESDAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480

Query: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Chy2G040100 vs. ExPASy TrEMBL
Match: A0A5A7T674 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003330 PE=3 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 5.2e-301
Identity = 508/538 (94.42%), Postives = 524/538 (97.40%), Query Frame = 0


Query: 1   MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
           MLKQRYLDCRRIT  LLATSAS LPAAPSN  DYQ+L+RVLEACRLF MNSKTVIETHAR
Sbjct: 1   MLKQRYLDCRRITCALLATSASALPAAPSNFTDYQTLHRVLEACRLFPMNSKTVIETHAR 60

Query: 61  IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
           IIKFGYGNYPTLI+SLVSTYQ VGCLNRVH+LLDILC K LDLVAMNLLIGNFMKIGECK
Sbjct: 61  IIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGNFMKIGECK 120

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
           FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFAS+LNACA
Sbjct: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACA 180

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
           QLGAPSNTHWV AQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNV
Sbjct: 181 QLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNV 240

Query: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
           MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLG+LTACNHGGLID GRRYFELM+S Y
Sbjct: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRY 300

Query: 301 SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
           SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMPIEPDVVTWRTLLSGC+IYKNHKLAEVA
Sbjct: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVA 360

Query: 361 IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
           IANMSH KSGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKS
Sbjct: 361 IANMSHCKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKS 420

Query: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
           GDRLHPESDAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 421 GDRLHPESDAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480

Query: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Chy2G040100 vs. ExPASy TrEMBL
Match: A0A6J1E1Y0 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430093 PE=3 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.7e-249
Identity = 416/505 (82.38%), Postives = 459/505 (90.89%), Query Frame = 0


Query: 34  YQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLL 93
           YQ+LYRVLEACRL   NSKT  ETHAR+IKFGYGNYPTL++SLVS YQR  CLNRVHQLL
Sbjct: 127 YQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLL 186

Query: 94  DILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEA 153
           ++LC K LDLVAMNL I NFMKIGECK AK+VF KMP+RDVVTWNSIIGGCVKNARY+EA
Sbjct: 187 NLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEA 246

Query: 154 FRFFRRMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDA 213
           F+FFR+ML SNIQPDGFTFAS+LNACAQLGAPSNT WVHA MTQKKIELNS+LSCALIDA
Sbjct: 247 FKFFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDA 306

Query: 214 YSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAITF 273
           YSKCGSIQIAKEIFS++P S+ SVWN MIKGLAIHGL+MDALS+F  ME ENVLPDA+TF
Sbjct: 307 YSKCGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTF 366

Query: 274 LGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMP 333
           LG+LTACNHGGLI++GRR+F+ MK+ YSIQPQLEHYGVMVDLYSRAGFL+EAYS+I+ MP
Sbjct: 367 LGILTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMP 426

Query: 334 IEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSHRKSGDYVLLSNIYCSLNRWKEAETVRK 393
           IE DVVTWR LLSGCRIY+N +LAEVAIANMSHR SGDYVLLSNIYCSLNRW+ AE VR+
Sbjct: 427 IEADVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRE 486

Query: 394 MMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTEL 453
            MK N VRK  GKSWIELGG+IQ FKSGDR HPESDA+ KV+  LMKR+R+EGYMPVT+L
Sbjct: 487 RMKSNGVRKSCGKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRSRSEGYMPVTDL 546

Query: 454 VFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLC 513
           V MDISEEEKEENLS+HSEK+ALAYAILKT PGAKISISKNLR+CDDCH WIKLVS +LC
Sbjct: 547 VLMDISEEEKEENLSYHSEKLALAYAILKTGPGAKISISKNLRMCDDCHRWIKLVSTLLC 606

Query: 514 RVIVVRDRIRFHQFEGGMCSCGDRW 539
           RV+VVRDRIRFHQFEGGMCSCGDRW
Sbjct: 607 RVVVVRDRIRFHQFEGGMCSCGDRW 631

[Close]

BLAST of Chy2G040100 vs. NCBI nr
Match: XP_011660258.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucumis sativus] >XP_011660259.1 pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucumis sativus])

HSP 1 Score: 1073 bits (2774), Expect = 0.0
Identity = 527/538 (97.96%), Postives = 533/538 (99.07%), Query Frame = 0


Query: 1   MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
           MLKQRYLDCRRITF LLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR
Sbjct: 1   MLKQRYLDCRRITFALLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60

Query: 61  IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
           IIKFGYGNYPTLI+SLVSTYQRVGCLNRVHQLLDILC KQLDLVAMNLLIGNFMKIGECK
Sbjct: 61  IIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECK 120

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
           FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFASILNACA
Sbjct: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACA 180

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
           QLGAPSNTHWVHAQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV
Sbjct: 181 QLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240

Query: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
           MIKGLAIHGLAMDALSLFLRMEHE+VLPDAITFLGVLTACNHG LID GRRYFELMKSHY
Sbjct: 241 MIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHY 300

Query: 301 SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
           SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMPIEPDVVTWRTLLSGCRIYKNHKLAEVA
Sbjct: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360

Query: 361 IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
           IANMS RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS
Sbjct: 361 IANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420

Query: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
           GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480

Query: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538
           LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Chy2G040100 vs. NCBI nr
Match: TYJ96962.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1040 bits (2689), Expect = 0.0
Identity = 508/538 (94.42%), Postives = 525/538 (97.58%), Query Frame = 0


Query: 1    MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
            MLKQRYLDCRRIT  LLATSAS LPAAPSN  DYQ+L+RVLEACRLF MNSKTVIETHAR
Sbjct: 605  MLKQRYLDCRRITCALLATSASALPAAPSNFTDYQTLHRVLEACRLFPMNSKTVIETHAR 664

Query: 61   IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
            IIKFGYGNYPTLI+SLVSTYQ VGCLNRVH+LLDILC K LDLVAMNLLIGNFMKIGECK
Sbjct: 665  IIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGNFMKIGECK 724

Query: 121  FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
            FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFAS+LNACA
Sbjct: 725  FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACA 784

Query: 181  QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
            QLGAPSNTHWV AQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNV
Sbjct: 785  QLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNV 844

Query: 241  MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
            MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLG+LTACNHGGLID GRRYFELM+S Y
Sbjct: 845  MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRY 904

Query: 301  SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
            SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMP+EPDVVTWRTLLSGC+IYKNHKLAEVA
Sbjct: 905  SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPLEPDVVTWRTLLSGCKIYKNHKLAEVA 964

Query: 361  IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
            IANMSHRKSGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKS
Sbjct: 965  IANMSHRKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKS 1024

Query: 421  GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
            GDRLHPESDAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 1025 GDRLHPESDAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 1084

Query: 481  LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538
            LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 1085 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 1142

[Close]

BLAST of Chy2G040100 vs. NCBI nr
Match: XP_008443769.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] >XP_008443770.1 PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] >XP_008443771.1 PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] >XP_008443772.1 PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] >XP_016899836.1 PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] >XP_016899837.1 PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] >KAA0038433.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1038 bits (2683), Expect = 0.0
Identity = 508/538 (94.42%), Postives = 524/538 (97.40%), Query Frame = 0


Query: 1   MLKQRYLDCRRITFDLLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
           MLKQRYLDCRRIT  LLATSAS LPAAPSN  DYQ+L+RVLEACRLF MNSKTVIETHAR
Sbjct: 1   MLKQRYLDCRRITCALLATSASALPAAPSNFTDYQTLHRVLEACRLFPMNSKTVIETHAR 60

Query: 61  IIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECK 120
           IIKFGYGNYPTLI+SLVSTYQ VGCLNRVH+LLDILC K LDLVAMNLLIGNFMKIGECK
Sbjct: 61  IIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGNFMKIGECK 120

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPDGFTFASILNACA 180
           FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPDGFTFAS+LNACA
Sbjct: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACA 180

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
           QLGAPSNTHWV AQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNV
Sbjct: 181 QLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNV 240

Query: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHY 300
           MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLG+LTACNHGGLID GRRYFELM+S Y
Sbjct: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRY 300

Query: 301 SIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
           SIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMPIEPDVVTWRTLLSGC+IYKNHKLAEVA
Sbjct: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVA 360

Query: 361 IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
           IANMSH KSGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKS
Sbjct: 361 IANMSHCKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKS 420

Query: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
           GDRLHPESDAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 421 GDRLHPESDAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480

Query: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538
           LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Chy2G040100 vs. NCBI nr
Match: XP_031736189.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucumis sativus])

HSP 1 Score: 1012 bits (2616), Expect = 0.0
Identity = 495/506 (97.83%), Postives = 502/506 (99.21%), Query Frame = 0


Query: 33  DYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGCLNRVHQL 92
           +YQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLI+SLVSTYQRVGCLNRVHQL
Sbjct: 18  NYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQL 77

Query: 93  LDILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDE 152
           LDILC KQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDE
Sbjct: 78  LDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDE 137

Query: 153 AFRFFRRMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALID 212
           AFRFFR+MLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLL+CALID
Sbjct: 138 AFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALID 197

Query: 213 AYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAIT 272
           AYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHE+VLPDAIT
Sbjct: 198 AYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAIT 257

Query: 273 FLGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTM 332
           FLGVLTACNHG LID GRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TM
Sbjct: 258 FLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTM 317

Query: 333 PIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSHRKSGDYVLLSNIYCSLNRWKEAETVR 392
           PIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMS RKSGDYVLLSNIYCSLNRWKEAETVR
Sbjct: 318 PIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCSLNRWKEAETVR 377

Query: 393 KMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTE 452
           KMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTE
Sbjct: 378 KMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTE 437

Query: 453 LVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVL 512
           LVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVL
Sbjct: 438 LVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVL 497

Query: 513 CRVIVVRDRIRFHQFEGGMCSCGDRW 538
           CRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 498 CRVIVVRDRIRFHQFEGGMCSCGDRW 523

[Close]

BLAST of Chy2G040100 vs. NCBI nr
Match: XP_031736190.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X3 [Cucumis sativus] >XP_031736191.1 pentatricopeptide repeat-containing protein At5g50990 isoform X3 [Cucumis sativus])

HSP 1 Score: 980 bits (2534), Expect = 0.0
Identity = 480/490 (97.96%), Postives = 486/490 (99.18%), Query Frame = 0


Query: 49  MNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNL 108
           MNSKTVIETHARIIKFGYGNYPTLI+SLVSTYQRVGCLNRVHQLLDILC KQLDLVAMNL
Sbjct: 1   MNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNL 60

Query: 109 LIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSNIQPD 168
           LIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFR+MLTSNIQPD
Sbjct: 61  LIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPD 120

Query: 169 GFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFS 228
           GFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFS
Sbjct: 121 GFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFS 180

Query: 229 NIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHGGLIDR 288
           NIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHE+VLPDAITFLGVLTACNHG LID 
Sbjct: 181 NIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDH 240

Query: 289 GRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGC 348
           GRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFL+EAYSLI+TMPIEPDVVTWRTLLSGC
Sbjct: 241 GRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGC 300

Query: 349 RIYKNHKLAEVAIANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSW 408
           RIYKNHKLAEVAIANMS RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSW
Sbjct: 301 RIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSW 360

Query: 409 IELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLS 468
           IELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLS
Sbjct: 361 IELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLS 420

Query: 469 FHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFE 528
           FHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFE
Sbjct: 421 FHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFE 480

Query: 529 GGMCSCGDRW 538
           GGMCSCGDRW
Sbjct: 481 GGMCSCGDRW 490

[Close]

BLAST of Chy2G040100 vs. TAIR 10
Match: AT5G50990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 555.1 bits (1429), Expect = 6.4e-158
Identity = 269/514 (52.33%), Postives = 367/514 (71.40%), Query Frame = 0


Query: 26  AAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGC 85
           ++ SN  D+  L +VLE+C+    NSK V++ HA+I K GYG YP+L+ S V+ Y+R   
Sbjct: 22  SSASNLTDHGMLKQVLESCKA-PSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNR 81

Query: 86  LNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCV 145
                +LL         +  +NL+I + MKIGE   AKKV      ++V+TWN +IGG V
Sbjct: 82  SYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYV 141

Query: 146 KNARYDEAFRFFRRMLT-SNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNS 205
           +N +Y+EA +  + ML+ ++I+P+ F+FAS L ACA+LG   +  WVH+ M    IELN+
Sbjct: 142 RNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNA 201

Query: 206 LLSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHE 265
           +LS AL+D Y+KCG I  ++E+F ++  +D S+WN MI G A HGLA +A+ +F  ME E
Sbjct: 202 ILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE 261

Query: 266 NVLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDE 325
           +V PD+ITFLG+LT C+H GL++ G+ YF LM   +SIQP+LEHYG MVDL  RAG + E
Sbjct: 262 HVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKE 321

Query: 326 AYSLILTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSHRKSGDYVLLSNIYCSLNR 385
           AY LI +MPIEPDVV WR+LLS  R YKN +L E+AI N+S  KSGDYVLLSNIY S  +
Sbjct: 322 AYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKK 381

Query: 386 WKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRT 445
           W+ A+ VR++M    +RK +GKSW+E GG I  FK+GD  H E+ AI KVL  L+++T++
Sbjct: 382 WESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKS 441

Query: 446 EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTW 505
           +G++  T+LV MD+SEEEKEENL++HSEK+ALAY ILK+SPG +I I KN+R+C DCH W
Sbjct: 442 QGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNW 501

Query: 506 IKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           IK VS++L RVI++RDRIRFH+FE G+CSC D W
Sbjct: 502 IKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534

[Close]

BLAST of Chy2G040100 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 393.3 bits (1009), Expect = 3.2e-109
Identity = 199/498 (39.96%), Postives = 293/498 (58.84%), Query Frame = 0


Query: 56  ETHARIIKFGYGNYPTLISSLVSTYQRVGCL---------NRVHQLLDILCPKQL---DL 115
           + H   +K+G+G    ++S+LV  Y   G +         N + + + ++  ++    ++
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208

Query: 116 VAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTS 175
           V  N++I  +M++G+CK A+ +F KM  R VV+WN++I G   N  + +A   FR M   
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268

Query: 176 NIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIA 235
           +I+P+  T  S+L A ++LG+     W+H       I ++ +L  ALID YSKCG I+ A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328

Query: 236 KEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGVLTACNHG 295
             +F  +P  +   W+ MI G AIHG A DA+  F +M    V P  + ++ +LTAC+HG
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388

Query: 296 GLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRT 355
           GL++ GRRYF  M S   ++P++EHYG MVDL  R+G LDEA   IL MPI+PD V W+ 
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448

Query: 356 LLSGCRIYKNHKLAE-VA--IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRV 415
           LL  CR+  N ++ + VA  + +M    SG YV LSN+Y S   W E   +R  MK   +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508

Query: 416 RKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISE 475
           RK  G S I++ G +  F   D  HP++  I  +L  +  + R  GY P+T  V +++ E
Sbjct: 509 RKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE 568

Query: 476 EEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRD 535
           E+KE  L +HSEK+A A+ ++ TSPG  I I KNLRIC+DCH+ IKL+S+V  R I VRD
Sbjct: 569 EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 628

Query: 536 RIRFHQFEGGMCSCGDRW 539
           R RFH F+ G CSC D W
Sbjct: 629 RKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of Chy2G040100 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 389.0 bits (998), Expect = 6.0e-108
Identity = 200/518 (38.61%), Postives = 301/518 (58.11%), Query Frame = 0


Query: 26  AAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLISSLVSTYQRVGC 85
           +AP N+  + SL   L+AC       +T  + HA+I K GY N    ++SL+++Y   G 
Sbjct: 110 SAPHNAYTFPSL---LKACSNLSAFEETT-QIHAQITKLGYENDVYAVNSLINSYAVTGN 169

Query: 86  LNRVHQLLDILCPKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCV 145
               H L D +   + D V+ N +I  ++K G+   A  +F KM  ++ ++W ++I G V
Sbjct: 170 FKLAHLLFDRI--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 229

Query: 146 KNARYDEAFRFFRRMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSL 205
           +     EA + F  M  S+++PD  + A+ L+ACAQLGA     W+H+ + + +I ++S+
Sbjct: 230 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 289

Query: 206 LSCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHEN 265
           L C LID Y+KCG ++ A E+F NI       W  +I G A HG   +A+S F+ M+   
Sbjct: 290 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 349

Query: 266 VLPDAITFLGVLTACNHGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEA 325
           + P+ ITF  VLTAC++ GL++ G+  F  M+  Y+++P +EHYG +VDL  RAG LDEA
Sbjct: 350 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 409

Query: 326 YSLILTMPIEPDVVTWRTLLSGCRIYKN----HKLAEVAIANMSHRKSGDYVLLSNIYCS 385
              I  MP++P+ V W  LL  CRI+KN     ++ E+ IA +     G YV  +NI+  
Sbjct: 410 KRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-IDPYHGGRYVHKANIHAM 469

Query: 386 LNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKR 445
             +W +A   R++MK   V K  G S I L GT   F +GDR HPE + I+     + ++
Sbjct: 470 DKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRK 529

Query: 446 TRTEGYMPVTELVFMD-ISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDD 505
               GY+P  E + +D + ++E+E  +  HSEK+A+ Y ++KT PG  I I KNLR+C D
Sbjct: 530 LEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKD 589

Query: 506 CHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           CH   KL+S++  R IV+RDR RFH F  G CSCGD W
Sbjct: 590 CHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

[Close]

BLAST of Chy2G040100 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 387.1 bits (993), Expect = 2.3e-107
Identity = 198/492 (40.24%), Postives = 300/492 (60.98%), Query Frame = 0


Query: 57  THARIIKFGYGNYPTLISSLVSTYQRVGCLNRVHQLLDILCPKQLDLVAMNLLIGNFMKI 116
           THA+I+ FG    P + +SL++ Y   G L    ++ D    K  DL A N ++  + K 
Sbjct: 84  THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAWNSVVNAYAKA 143

Query: 117 GECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLTSN-----IQPDGFT 176
           G    A+K+F +MP R+V++W+ +I G V   +Y EA   FR M         ++P+ FT
Sbjct: 144 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 203

Query: 177 FASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNI- 236
            +++L+AC +LGA     WVHA + +  +E++ +L  ALID Y+KCGS++ AK +F+ + 
Sbjct: 204 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 263

Query: 237 PHSDTSVWNVMIKGLAIHGLAMDALSLFLRM-EHENVLPDAITFLGVLTACNHGGLIDRG 296
              D   ++ MI  LA++GL  +   LF  M   +N+ P+++TF+G+L AC H GLI+ G
Sbjct: 264 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 323

Query: 297 RRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTWRTLLSGCR 356
           + YF++M   + I P ++HYG MVDLY R+G + EA S I +MP+EPDV+ W +LLSG R
Sbjct: 324 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 383

Query: 357 IYKNHKLAEVA---IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGK 416
           +  + K  E A   +  +    SG YVLLSN+Y    RW E + +R  M++  + K  G 
Sbjct: 384 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 443

Query: 417 SWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEEN 476
           S++E+ G +  F  GD    ES+ I  +L  +M+R R  GY+  T+ V +D++E++KE  
Sbjct: 444 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 503

Query: 477 LSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQ 536
           LS+HSEK+A+A+ ++KT PG  + I KNLRIC DCH  +K++S++  R IVVRD  RFH 
Sbjct: 504 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 563

Query: 537 FEGGMCSCGDRW 539
           F  G CSC D W
Sbjct: 564 FRDGSCSCRDFW 573

[Close]

BLAST of Chy2G040100 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 386.0 bits (990), Expect = 5.1e-107
Identity = 190/440 (43.18%), Postives = 276/440 (62.73%), Query Frame = 0


Query: 103 LVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRRMLT 162
           +   N L+  +   G+   A KVF KMP +D+V WNS+I G  +N + +EA   +  M +
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215

Query: 163 SNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLSCALIDAYSKCGSIQI 222
             I+PDGFT  S+L+ACA++GA +    VH  M +  +  N   S  L+D Y++CG ++ 
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275

Query: 223 AKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEH-ENVLPDAITFLGVLTACN 282
           AK +F  +   ++  W  +I GLA++G   +A+ LF  ME  E +LP  ITF+G+L AC+
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335

Query: 283 HGGLIDRGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLDEAYSLILTMPIEPDVVTW 342
           H G++  G  YF  M+  Y I+P++EH+G MVDL +RAG + +AY  I +MP++P+VV W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395

Query: 343 RTLLSGCRIYKNHKLAEVA---IANMSHRKSGDYVLLSNIYCSLNRWKEAETVRKMMKIN 402
           RTLL  C ++ +  LAE A   I  +    SGDYVLLSN+Y S  RW + + +RK M  +
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455

Query: 403 RVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDI 462
            V+K  G S +E+G  +  F  GD+ HP+SDAI   L  +  R R+EGY+P    V++D+
Sbjct: 456 GVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDV 515

Query: 463 SEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVV 522
            EEEKE  + +HSEK+A+A+ ++ T   + I++ KNLR+C DCH  IKLVS+V  R IVV
Sbjct: 516 EEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVV 575

Query: 523 RDRIRFHQFEGGMCSCGDRW 539
           RDR RFH F+ G CSC D W
Sbjct: 576 RDRSRFHHFKNGSCSCQDYW 595

The following BLAST results are available for this feature:

BLAST of Chy2G040100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI49	8.9e-157	52.33	Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana OX...	[more]
Q9FI80	4.5e-108	39.96	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	8.5e-107	38.61	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q683I9	3.2e-106	40.24	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	7.2e-106	43.18	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]

BLAST of Chy2G040100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXZ9	0.0e+00	97.96	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6669...	[more]
A0A5D3BAU8	1.1e-301	94.42	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DV22	5.2e-301	94.42	pentatricopeptide repeat-containing protein At5g50990 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7T674	5.2e-301	94.42	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1E1Y0	2.7e-249	82.38	pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita mo...	[more]

BLAST of Chy2G040100 vs. NCBI nr


Match Name	Identity	Description
XP_011660258.1	97.96	pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucumis sativu...	[more]
TYJ96962.1	94.42	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008443769.1	94.42	PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis melo] ...	[more]
XP_031736189.1	97.83	pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucumis sativu...	[more]
XP_031736190.1	97.96	pentatricopeptide repeat-containing protein At5g50990 isoform X3 [Cucumis sativu...	[more]

BLAST of Chy2G040100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50990.1	6.4e-158	52.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	3.2e-109	39.96	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	6.0e-108	38.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62890.1	2.3e-107	40.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	5.1e-107	43.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 405..528 e-value: 1.1E-33 score: 115.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 234..280 e-value: 3.8E-7 score: 30.2 coord: 132..180 e-value: 9.1E-14 score: 51.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 237..270 e-value: 6.4E-5 score: 20.9 coord: 135..168 e-value: 4.2E-9 score: 34.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 374..397 e-value: 0.69 score: 10.3 coord: 104..130 e-value: 0.98 score: 9.8 coord: 308..332 e-value: 0.014 score: 15.6 coord: 209..228 e-value: 0.6 score: 10.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 234..268 score: 10.468099
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 133..167 score: 13.350921
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 209..436 e-value: 1.1E-37 score: 132.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 52..186 e-value: 1.1E-22 score: 82.3
None	No IPR available	PANTHER	PTHR24015:SF297	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 15..484
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 15..484

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G040100.1	Chy2G040100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding