Chy2G039350 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGGAAGAGTGAAGGATTTTATGTTGTTGAGTTTATGCTATGTGGTAACAGTCATAGGGATAGAGCTAAGATCTTGTGACCAATAGCTTCACTGCTGTTTGATGGGGCTTATGGCTGAATGACATAAAAACTTAAATCTAATACAAGAGGTTGTAGTTTTGTTCCTTCTTCTTAGTGCCTTGTGTCCTTGTAGAATCTTGTACTGAGTAAGTTTGGTGTGCAGGATAAATTGATCATTTATCTTTGACGAGAGTAACTTTTTAAATGCTAAGTATAGAAGTTTGAAAGCAATATTCATCTTTTCTATTTTTTGAAACAGTATAAAAATTTTCAAATTTTAAATGCTTATCTGGAACTCGTGGAAATGGATCATCTCCATTTTGTAAAATTTGAACAACAATTAAAAGAATGACACAGATCCAACCCTTAATCTTGTCAATGACCTTTGTGATCAAGAGCCTTCAAATAATTGAAGTTTTACTCTGAAGTGTCTGAGAAATAAACTACAATCAATATTCATTACCGACAATGAGATTACTGAACTAAAGCGAAATAATAAACAGAGACGAGGTAGTTTGAGGTAGAAAAAACAACAATTGAGGCACTCTAGGACTTGTTTTCTGCTATTCTCTTCTTGCCTTTCATAGGGATCATACAGATTAGTAATTGATATTGCTATCTTAACTAAGAGGATATATTTTTCATTATTCGAAGTTGGTTTTATAGTTGTGCTTGAATGTATTTACTGTTAACTCATTGTATATGGATTTTGAATGCCCTTCAAGATTCACCTGTGTAGAGCTGAAAATTCATTTAAAAAACATCAAAGCTGTTAAGTTTGCTACATGCTTGTGATTGTGTTTTATCTGTCAAATCCCTTATGCTTTTTTGTGTATTTTTTTTTTAAATGACCAAATGAGACCAATTTTTATTTTAACTGAAGTCAATATTTTTCTACAAACTTAAGGTTCTTGGAACAGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTAGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGAGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTCGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCGGATACTGATGGGATTCTAGTTTCACGAACTGAGTTGTCTGTTTAG ATGCCTGGAAGAGTGAAGGATTTTATGTTGTTGAGTTTATGCTATGTGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTAGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGAGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTCGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCGGATACTGATGGGATTCTAGTTTCACGAACTGAGTTGTCTGTTTAG ATGCCTGGAAGAGTGAAGGATTTTATGTTGTTGAGTTTATGCTATGTGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTAGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGAGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTCGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCGGATACTGATGGGATTCTAGTTTCACGAACTGAGTTGTCTGTTTAG MPGRVKDFMLLSLCYVMALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV* Homology
BLAST of Chy2G039350 vs. ExPASy Swiss-Prot
Match: Q9FFE0 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.3e-79 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy Swiss-Prot
Match: Q9M8R9 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.4e-77 Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy Swiss-Prot
Match: Q9FH13 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 6.1e-65 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy Swiss-Prot
Match: Q46ZV6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.6e-49 Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy Swiss-Prot
Match: A9AHQ6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=Bmul_1223 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 4.7e-49 Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy TrEMBL
Match: A0A0A0LXT5 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_1G657460 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy TrEMBL
Match: A0A5D3E4B6 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00850 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.8e-89 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy TrEMBL
Match: A0A1S3B858 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103487227 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.8e-89 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy TrEMBL
Match: A0A6J1JHR3 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita maxima OX=3661 GN=LOC111485820 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 8.2e-89 Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. ExPASy TrEMBL
Match: A0A6J1H9P8 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC111461380 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88 Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. NCBI nr
Match: XP_004139103.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus] >KGN66670.1 hypothetical protein Csa_007309 [Cucumis sativus]) HSP 1 Score: 333 bits (855), Expect = 4.66e-115 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. NCBI nr
Match: XP_023515582.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo] >XP_023515583.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 333 bits (853), Expect = 9.41e-115 Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. NCBI nr
Match: XP_008443692.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo] >XP_038880156.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Benincasa hispida] >KAA0038259.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo var. makuwa] >TYK30658.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 332 bits (852), Expect = 1.34e-114 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. NCBI nr
Match: XP_022988625.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_022988626.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima]) HSP 1 Score: 332 bits (850), Expect = 2.70e-114 Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. NCBI nr
Match: XP_022960655.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >XP_022960656.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >KAG7023765.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 330 bits (847), Expect = 7.74e-114 Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Chy2G039350 vs. TAIR 10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase ) HSP 1 Score: 295.8 bits (756), Expect = 2.4e-80 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of Chy2G039350 vs. TAIR 10
Match: AT5G16450.2 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase ) HSP 1 Score: 295.8 bits (756), Expect = 2.4e-80 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of Chy2G039350 vs. TAIR 10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase ) HSP 1 Score: 289.7 bits (740), Expect = 1.7e-78 Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of Chy2G039350 vs. TAIR 10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase ) HSP 1 Score: 248.4 bits (633), Expect = 4.3e-66 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|