Chy2G038540 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGTCACAATCTAGCAGTGAGGATGAAAGACAAATGATTCCTGAAGTAAGAAACAAATCATTCGTGCCACGTGGCTCAATGAATATGTCAGAGTTGGCATCAGTAAGAAATTCTGGACAACGGTTGCCCATTCAATTTAATGAACACGGGCAACCTGTAGGAGCCATATCTAAGAAAATGCAAAGTTACATTGGTGTGTGCGTTTGGCAACAGATTCCTATCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAGATCTATGATTGTATAACCGTATGAATTCTATAATTACATTTTTCATACAATGTAGTTTGATTTCTCTAAGTATAAATATGTTTTTCTTTTTTCTTGTGTAGATGTCATTTGAGTTACATCCTAATGCTAAACACTCTATCCTAATGTCTGCATCAAGAAAGTATCAAACTTTCAAAACCACGTTGACTTAGAAGTATACTTCCGTTTAAGGATCAACATCATGTTTGCAGTTTCCTCCTAAAATTTATTCTCATATTAATCAAGAAGATTGGAACTCCTTTATGGACGCTAGACTAACTGAAGAATGGGAGGTAAATAAATTTAATTACATGTTAACTTTAATATTGTTTTGGTATGTAACTACAAACTAATGCTTTGTATAGGATTATAGTCGTATTCAAAGGGAAAGAAGATCAAAATGCGTATACAATCATCACATTGCTCGTAAGGGATATGCGAATCTTGCCGCCAAATTAGTTAATCTTTCTAATTGAATAAGATAATTTATCTTAATATGTTTATGCCAATTAAATATATATCTTTGGTTGCTGAATATAACGCGTGATGTTTCCTATCGTTCAACTCTTTGGAAAGAAGCACGGAAAGGAAAGAACAATGATTATTTTGATGATGCTACTCGAGATTGTGTCTCTCATATCGTAAGTTTACTTACGATTTACATATATATAATATATAATCTTTTGTTAACTTAGCTAATGATGAACATACTTGTATTGTTCTATAGGATGCATTAGCCGCAACACATAAAGATGAGGACATATTGACTGAAGCATTGGGCTCCAAGGAGCACGGTGGACGTGTACGTGGCCTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGAAAATGATAAGTTCTGAAGTTGAAATATGTCATAAAGAAGATGACTCAAAAAGCAAAAGTTACAAGAAGAGTCATAATCACTCGAGATCGTCCATCGGAAGTGTTAACATAGATCTCAATGCTGATGAGGATTTGGGCAACACACCTAGCAAGGAAGAAGTGAAGGTAATTAACTTTGTTGTCACTTTTAAAATTTTAATGTTTATAG ATGGAGGAGTCACAATCTAGCAGTGAGGATGAAAGACAAATGATTCCTGAAGTAAGAAACAAATCATTCGTGCCACGTGGCTCAATGAATATGTCAGAGTTGGCATCAGATTATAGTCGTATTCAAAGGGAAAGAAGATCAAAATGCGTATACAATCATCACATTGCTCGTAAGGGATATGCGAATCTTGCCGCCAAATTAGCGTGATGTTTCCTATCGTTCAACTCTTTGGAAAGAAGCACGGAAAGGAAAGAACAATGATTATTTTGATGATGCTACTCGAGATTGTGTCTCTCATATCGATGCATTAGCCGCAACACATAAAGATGAGGACATATTGACTGAAGCATTGGGCTCCAAGGAGCACGGTGGACGTGTACGTGGCCTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGAAAATGATAAGTTCTGAAGTTGAAATATGTCATAAAGAAGATGACTCAAAAAGCAAAAGTTACAAGAAGAGTCATAATCACTCGAGATCGTCCATCGGAAGTGTTAACATAGATCTCAATGCTGATGAGGATTTGGGCAACACACCTAGCAAGGAAGAAGTGAAGGTAATTAACTTTGTTGTCACTTTTAAAATTTTAATGTTTATAG ATGGAGGAGTCACAATCTAGCAGTGAGGATGAAAGACAAATGATTCCTGAAGTAAGAAACAAATCATTCGTGCCACGTGGCTCAATGAATATGTCAGAGTTGGCATCAGATTATAGTCGTATTCAAAGGGAAAGAAGATCAAAATGCGTATACAATCATCACATTGCTCGTAAGGGATATGCGAATCTTGCCGCCAAATTAGCGTGATGTTTCCTATCGTTCAACTCTTTGGAAAGAAGCACGGAAAGGAAAGAACAATGATTATTTTGATGATGCTACTCGAGATTGTGTCTCTCATATCGATGCATTAGCCGCAACACATAAAGATGAGGACATATTGACTGAAGCATTGGGCTCCAAGGAGCACGGTGGACGTGTACGTGGCCTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGAAAATGATAAGTTCTGAAGTTGAAATATGTCATAAAGAAGATGACTCAAAAAGCAAAAGTTACAAGAAGAGTCATAATCACTCGAGATCGTCCATCGGAAGTGTTAACATAGATCTCAATGCTGATGAGGATTTGGGCAACACACCTAGCAAGGAAGAAGTGAAGGTAATTAACTTTGTTGTCACTTTTAAAATTTTAATGTTTATAG MEESQSSSEDERQMIPEVRNKSFVPRGSMNMSELASDYSRIQRERRSKCVYNHHIARKGYANLAAKLA*CFLSFNSLERSTERKEQ*LF**CYSRLCLSYRCISRNT*R*GHID*SIGLQGARWTCTWPGWFCLSITIFQNSERERENDKF*S*NMS*RR*LKKQKLQEES*SLEIVHRKC*HRSQC**GFGQHT*QGRSEGN*LCCHF*NFNVYX Homology
BLAST of Chy2G038540 vs. ExPASy TrEMBL
Match: A0A0A0K8F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G157500 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 4.7e-19 Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of Chy2G038540 vs. ExPASy TrEMBL
Match: A0A5A7VDV7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001540 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.2e-07 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of Chy2G038540 vs. ExPASy TrEMBL
Match: A0A5A7TFM9 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G001090 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.3e-07 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of Chy2G038540 vs. ExPASy TrEMBL
Match: A0A5D3DZI0 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00080 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.3e-07 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of Chy2G038540 vs. ExPASy TrEMBL
Match: A0A5A7V150 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001320 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-06 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of Chy2G038540 vs. NCBI nr
Match: KGN44061.1 (hypothetical protein Csa_015448 [Cucumis sativus]) HSP 1 Score: 105 bits (263), Expect = 3.66e-24 Identity = 59/86 (68.60%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Chy2G038540 vs. NCBI nr
Match: KAA0038895.1 (uncharacterized protein E6C27_scaffold1170G00630 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 5.92e-10 Identity = 51/128 (39.84%), Postives = 63/128 (49.22%), Query Frame = 0
BLAST of Chy2G038540 vs. NCBI nr
Match: KAA0065464.1 (uncharacterized protein E6C27_scaffold17G001540 [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 2.94e-08 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Chy2G038540 vs. NCBI nr
Match: KAA0048450.1 (uncharacterized protein E6C27_scaffold61G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 4.22e-08 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Chy2G038540 vs. NCBI nr
Match: TYK28247.1 (uncharacterized protein E5676_scaffold600G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 4.39e-08 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|