Chy2G036300 (gene) Cucumber (hystrix) v1

Overview
NameChy2G036300
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 10191488 .. 10192056 (+)
RNA-Seq ExpressionChy2G036300
SyntenyChy2G036300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAATTCCCAAGAGTGAACAACCATAACGAGACATACACGGACAGAATTTCAAGCTTAGAATGGAGCAAAGCAAGGAAGACGATGATCGAAGAGCAAGCAAATGCCGAATTACAATCTCTCCAACTTCTCTACCCCAATCGTTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCATCTCCTTCAATCCCAACCCGAACATCCTTTTCCTCAGCCAAACACTATCTTAACCTCCAACCGCTCGCCGTCGCCGTCCTCTTTGGGTCCTGATACACAAGGTCAGTATAACGAATTAATTAACAATATTCACTTCTTTTTGTCTCTTCTTGTTTACTGATACATGATTTTGGAGTAGAGTCGAGTAGTTGTAGGAAGAGGAGGAAGGTGGCGGAAGGAAGAAACAATGGAAGGAATGGATTACAGAAAGAGGTTGCTGAATATGAATCTGAATCGAAGATGGGACGGGGGAAGGATAGAGTGGACGTAGTTCTGGAAAGAGCGGCCGTTTGTCTTTGCAAGATTCGACGGTTCAAAATGGCGCTGTTTTCCTCAGCGGGTTGA

mRNA sequence

ATGGCAGAATTCCCAAGAGTGAACAACCATAACGAGACATACACGGACAGAATTTCAAGCTTAGAATGGAGCAAAGCAAGGAAGACGATGATCGAAGAGCAAGCAAATGCCGAATTACAATCTCTCCAACTTCTCTACCCCAATCGTTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCATCTCCTTCAATCCCAACCCGAACATCCTTTTCCTCAGCCAAACACTATCTTAACCTCCAACCGCTCGCCGTCGCCGTCCTCTTTGGGTCCTGATACACAAGAGTCGAGTAGTTGTAGGAAGAGGAGGAAGGTGGCGGAAGGAAGAAACAATGGAAGGAATGGATTACAGAAAGAGGTTGCTGAATATGAATCTGAATCGAAGATGGGACGGGGGAAGGATAGAGTGGACGTAGTTCTGGAAAGAGCGGCCGTTTGTCTTTGCAAGATTCGACGGTTCAAAATGGCGCTGTTTTCCTCAGCGGGTTGA

Coding sequence (CDS)

ATGGCAGAATTCCCAAGAGTGAACAACCATAACGAGACATACACGGACAGAATTTCAAGCTTAGAATGGAGCAAAGCAAGGAAGACGATGATCGAAGAGCAAGCAAATGCCGAATTACAATCTCTCCAACTTCTCTACCCCAATCGTTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCATCTCCTTCAATCCCAACCCGAACATCCTTTTCCTCAGCCAAACACTATCTTAACCTCCAACCGCTCGCCGTCGCCGTCCTCTTTGGGTCCTGATACACAAGAGTCGAGTAGTTGTAGGAAGAGGAGGAAGGTGGCGGAAGGAAGAAACAATGGAAGGAATGGATTACAGAAAGAGGTTGCTGAATATGAATCTGAATCGAAGATGGGACGGGGGAAGGATAGAGTGGACGTAGTTCTGGAAAGAGCGGCCGTTTGTCTTTGCAAGATTCGACGGTTCAAAATGGCGCTGTTTTCCTCAGCGGGTTGA

Protein sequence

MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSFIHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKEVAEYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG*
Homology
BLAST of Chy2G036300 vs. ExPASy TrEMBL
Match: A0A0A0LX97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600880 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEFPRV NHNETYT++ISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF
Sbjct: 1   MAEFPRVKNHNETYTEKISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQPEHPFPQPNT LTSNRSPSPSS GPDTQESSSCRKRRKVAEGRNNGRNGLQKE
Sbjct: 61  IHLLQSQPEHPFPQPNTNLTSNRSPSPSSFGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120

Query: 121 VA--EYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 164
           VA  EYESE+KMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG
Sbjct: 121 VAEYEYESETKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 165

BLAST of Chy2G036300 vs. ExPASy TrEMBL
Match: A0A5D3DU40 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5245G00010 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.9e-69
Identity = 144/163 (88.34%), Postives = 149/163 (91.41%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEF    NHNETYT+RISSLEWSKARKTMIEEQAN ELQSLQLLYPNRFEYLKLELKSF
Sbjct: 1   MAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSF 60

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ EHPFPQPNTILTSNRSPSP S GPDTQESSSCRKRRKV EGRN+ RNGLQ+E
Sbjct: 61  IHLLQSQSEHPFPQPNTILTSNRSPSPFSFGPDTQESSSCRKRRKVEEGRNSRRNGLQRE 120

Query: 121 VAEYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 164
           VA  ESESK+GR KDRV+VVLERAAVCLCKIRRFKMALFSS G
Sbjct: 121 VA--ESESKIGRRKDRVEVVLERAAVCLCKIRRFKMALFSSVG 161

BLAST of Chy2G036300 vs. ExPASy TrEMBL
Match: A0A1S3BRF0 (uncharacterized protein LOC103492458 OS=Cucumis melo OX=3656 GN=LOC103492458 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.9e-69
Identity = 144/163 (88.34%), Postives = 149/163 (91.41%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEF    NHNETYT+RISSLEWSKARKTMIEEQAN ELQSLQLLYPNRFEYLKLELKSF
Sbjct: 23  MAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSF 82

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ EHPFPQPNTILTSNRSPSP S GPDTQESSSCRKRRKV EGRN+ RNGLQ+E
Sbjct: 83  IHLLQSQSEHPFPQPNTILTSNRSPSPFSFGPDTQESSSCRKRRKVEEGRNSRRNGLQRE 142

Query: 121 VAEYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 164
           VA  ESESK+GR KDRV+VVLERAAVCLCKIRRFKMALFSS G
Sbjct: 143 VA--ESESKIGRRKDRVEVVLERAAVCLCKIRRFKMALFSSVG 183

BLAST of Chy2G036300 vs. ExPASy TrEMBL
Match: A0A5A7UQ57 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00620 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55
Identity = 120/137 (87.59%), Postives = 125/137 (91.24%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEF    NHNETYT+RISSLEWSKARKTMIEEQAN ELQSLQLLYPNRFEYLKLELKSF
Sbjct: 23  MAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSF 82

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ EHPFPQPN+ILTSNRSPSPSS GPDTQESSSCRKRRKV EGRN+ RNGLQ+E
Sbjct: 83  IHLLQSQSEHPFPQPNSILTSNRSPSPSSFGPDTQESSSCRKRRKVEEGRNSRRNGLQRE 142

Query: 121 VAEYESESKMGRGKDRV 138
           VA  ESESK+GR KDRV
Sbjct: 143 VA--ESESKIGRRKDRV 157

BLAST of Chy2G036300 vs. ExPASy TrEMBL
Match: A0A6J1F625 (uncharacterized protein LOC111441161 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441161 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-37
Identity = 99/151 (65.56%), Postives = 115/151 (76.16%), Query Frame = 0

Query: 18  ISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSFIHLLQSQ----PEHPFP 77
           +  LEWS+ARK MIE+QA AEL+SLQLL+PNRFEYLKLELKSFI LLQSQ     E  F 
Sbjct: 1   MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60

Query: 78  QPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNG--RNGLQKEVAEYESESKMG 137
           QPNT+  S R  SPS+L PD+QESSSCRKRRK+ EG       NGL++E+AE E+  K G
Sbjct: 61  QPNTVEASRRR-SPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 120

Query: 138 RGKDRVDVVLERAAVCLCKIRRFKMALFSSA 163
           R +DRVDVVLERA VCL KI+RFK AL S+A
Sbjct: 121 RRRDRVDVVLERAVVCLRKIQRFKTALISTA 150

BLAST of Chy2G036300 vs. NCBI nr
Match: XP_004144150.1 (uncharacterized protein LOC101216009 [Cucumis sativus] >KGN66398.1 hypothetical protein Csa_007478 [Cucumis sativus])

HSP 1 Score: 302 bits (774), Expect = 4.67e-103
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEFPRV NHNETYT++ISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF
Sbjct: 1   MAEFPRVKNHNETYTEKISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQPEHPFPQPNT LTSNRSPSPSS GPDTQESSSCRKRRKVAEGRNNGRNGLQKE
Sbjct: 61  IHLLQSQPEHPFPQPNTNLTSNRSPSPSSFGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120

Query: 121 VAEYE--SESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 163
           VAEYE  SE+KMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG
Sbjct: 121 VAEYEYESETKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 165

BLAST of Chy2G036300 vs. NCBI nr
Match: TYK27024.1 (uncharacterized protein E5676_scaffold5245G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (695), Expect = 4.49e-91
Identity = 144/163 (88.34%), Postives = 149/163 (91.41%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEF    NHNETYT+RISSLEWSKARKTMIEEQAN ELQSLQLLYPNRFEYLKLELKSF
Sbjct: 1   MAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSF 60

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ EHPFPQPNTILTSNRSPSP S GPDTQESSSCRKRRKV EGRN+ RNGLQ+E
Sbjct: 61  IHLLQSQSEHPFPQPNTILTSNRSPSPFSFGPDTQESSSCRKRRKVEEGRNSRRNGLQRE 120

Query: 121 VAEYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 163
           VAE  SESK+GR KDRV+VVLERAAVCLCKIRRFKMALFSS G
Sbjct: 121 VAE--SESKIGRRKDRVEVVLERAAVCLCKIRRFKMALFSSVG 161

BLAST of Chy2G036300 vs. NCBI nr
Match: XP_008451071.1 (PREDICTED: uncharacterized protein LOC103492458 [Cucumis melo])

HSP 1 Score: 272 bits (695), Expect = 9.52e-91
Identity = 144/163 (88.34%), Postives = 149/163 (91.41%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEF    NHNETYT+RISSLEWSKARKTMIEEQAN ELQSLQLLYPNRFEYLKLELKSF
Sbjct: 23  MAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSF 82

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ EHPFPQPNTILTSNRSPSP S GPDTQESSSCRKRRKV EGRN+ RNGLQ+E
Sbjct: 83  IHLLQSQSEHPFPQPNTILTSNRSPSPFSFGPDTQESSSCRKRRKVEEGRNSRRNGLQRE 142

Query: 121 VAEYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 163
           VAE  SESK+GR KDRV+VVLERAAVCLCKIRRFKMALFSS G
Sbjct: 143 VAE--SESKIGRRKDRVEVVLERAAVCLCKIRRFKMALFSSVG 183

BLAST of Chy2G036300 vs. NCBI nr
Match: XP_038878738.1 (uncharacterized protein LOC120070912 [Benincasa hispida] >XP_038878739.1 uncharacterized protein LOC120070912 [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 2.61e-73
Identity = 126/163 (77.30%), Postives = 138/163 (84.66%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MA  PR    NETY + +SSLEWSK+RK MIEEQANAEL+SLQLLYPNRFEYLKLELKSF
Sbjct: 25  MAAVPR---ENETYRETMSSLEWSKSRKKMIEEQANAELESLQLLYPNRFEYLKLELKSF 84

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ E PFPQP+T+LTS  SPSPSSL PD+QESSSCRKR+K+ EGRN    GLQ+E
Sbjct: 85  IHLLQSQSEEPFPQPHTVLTSKCSPSPSSLAPDSQESSSCRKRKKMEEGRN----GLQRE 144

Query: 121 VAEYESESKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 163
           V E  SESK+ R KDRVDVVLERAAVCLCKIRRFK ALFS+AG
Sbjct: 145 VGE--SESKIERRKDRVDVVLERAAVCLCKIRRFKTALFSTAG 178

BLAST of Chy2G036300 vs. NCBI nr
Match: KAA0055681.1 (uncharacterized protein E6C27_scaffold181G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 226 bits (575), Expect = 7.76e-73
Identity = 120/137 (87.59%), Postives = 125/137 (91.24%), Query Frame = 0

Query: 1   MAEFPRVNNHNETYTDRISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSF 60
           MAEF    NHNETYT+RISSLEWSKARKTMIEEQAN ELQSLQLLYPNRFEYLKLELKSF
Sbjct: 23  MAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSF 82

Query: 61  IHLLQSQPEHPFPQPNTILTSNRSPSPSSLGPDTQESSSCRKRRKVAEGRNNGRNGLQKE 120
           IHLLQSQ EHPFPQPN+ILTSNRSPSPSS GPDTQESSSCRKRRKV EGRN+ RNGLQ+E
Sbjct: 83  IHLLQSQSEHPFPQPNSILTSNRSPSPSSFGPDTQESSSCRKRRKVEEGRNSRRNGLQRE 142

Query: 121 VAEYESESKMGRGKDRV 137
           VAE  SESK+GR KDRV
Sbjct: 143 VAE--SESKIGRRKDRV 157

BLAST of Chy2G036300 vs. TAIR 10
Match: AT5G36960.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 0

Query: 24  SKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSFIHLLQSQPEHPFPQPNTILTSNR 83
           S + +  + E A  EL+ LQ  YPNRF YLK +L+SFI  L+   +H  P+         
Sbjct: 4   SSSWEMQLVETAKEELEILQSQYPNRFAYLKSDLQSFISHLRE--DHAPPR--------- 63

Query: 84  SPSPSSLGPDTQESSSC-----RKRRKVAEGRNNGRNGLQKEVAEYESESKMG-----RG 143
             SPSS    TQESS+C      K+RK        +         +++ +KMG     + 
Sbjct: 64  -LSPSSSVVLTQESSNCNYKQKHKKRKCVMDNLGDQASSSTTGKIHKNNNKMGQRVVTKK 123

Query: 144 KDRVDVVLERAAVCLCKIRRFKMAL 159
           K+RV++VLERA +CL KIR  K +L
Sbjct: 124 KNRVEMVLERAQLCLQKIRDVKASL 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LX972.0e-7895.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600880 PE=4 SV=1[more]
A0A5D3DU402.9e-6988.34Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BRF02.9e-6988.34uncharacterized protein LOC103492458 OS=Cucumis melo OX=3656 GN=LOC103492458 PE=... [more]
A0A5A7UQ571.8e-5587.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1F6251.7e-3765.56uncharacterized protein LOC111441161 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_004144150.14.67e-10395.15uncharacterized protein LOC101216009 [Cucumis sativus] >KGN66398.1 hypothetical ... [more]
TYK27024.14.49e-9188.34uncharacterized protein E5676_scaffold5245G00010 [Cucumis melo var. makuwa][more]
XP_008451071.19.52e-9188.34PREDICTED: uncharacterized protein LOC103492458 [Cucumis melo][more]
XP_038878738.12.61e-7377.30uncharacterized protein LOC120070912 [Benincasa hispida] >XP_038878739.1 unchara... [more]
KAA0055681.17.76e-7387.59uncharacterized protein E6C27_scaffold181G00620 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT5G36960.11.7e-0836.55unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G036300.1Chy2G036300.1mRNA