Chy1G020690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G020690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pyridoxal 5'-phosphate synthase subunit PDX1
Location	chrH01: 25494293 .. 25494589 (-)
RNA-Seq Expression	Chy1G020690
Synteny	Chy1G020690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGAATGAGGTTTTCGCTTACTCGCGAGAGATCGCTGCGCCTTATGATCTTGTCAAAGAAACCAGGGAACTTGGCAGACTACCGGCAATCCATTACGCGGCAGGAGGCATTATGACTCCTGCGGATGCCGCTTTGATGATGCAGTTAGGTTGTGATGGGATCTTTCTTGGATTGGAGATATTCGAATACCCTAATCCTCGCGACCGATTAAGAAGAATGATTGAGGCAGTGAGGAATCACAGCGATCCCGAAGCACTGGCGCGAGCTGCTTTTGGTTTTGGCCCCGCGTGA

mRNA sequence

ATGGATGAGAATGAGGTTTTCGCTTACTCGCGAGAGATCGCTGCGCCTTATGATCTTGTCAAAGAAACCAGGGAACTTGGCAGACTACCGGCAATCCATTACGCGGCAGGAGGCATTATGACTCCTGCGGATGCCGCTTTGATGATGCAGTTAGGTTGTGATGGGATCTTTCTTGGATTGGAGATATTCGAATACCCTAATCCTCGCGACCGATTAAGAAGAATGATTGAGGCAGTGAGGAATCACAGCGATCCCGAAGCACTGGCGCGAGCTGCTTTTGGTTTTGGCCCCGCGTGA

Coding sequence (CDS)

ATGGATGAGAATGAGGTTTTCGCTTACTCGCGAGAGATCGCTGCGCCTTATGATCTTGTCAAAGAAACCAGGGAACTTGGCAGACTACCGGCAATCCATTACGCGGCAGGAGGCATTATGACTCCTGCGGATGCCGCTTTGATGATGCAGTTAGGTTGTGATGGGATCTTTCTTGGATTGGAGATATTCGAATACCCTAATCCTCGCGACCGATTAAGAAGAATGATTGAGGCAGTGAGGAATCACAGCGATCCCGAAGCACTGGCGCGAGCTGCTTTTGGTTTTGGCCCCGCGTGA

Protein sequence

MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGLEIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA*

Homology

[Close]

BLAST of Chy1G020690 vs. ExPASy Swiss-Prot
Match: Q9FT25 (Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris OX=3885 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-29
Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF +++ IAAPYDLV +T++LGRLP +H+AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 196 MDDDEVFTFAKSIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQLGCDGVFVGS 255

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            +F+  +P  R R +++AV ++SDPE LA  + G G A
Sbjct: 256 GVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEA 293

[Close]

BLAST of Chy1G020690 vs. ExPASy Swiss-Prot
Match: Q41348 (Probable pyridoxal 5'-phosphate synthase subunit PDX1 (Fragment) OS=Stellaria longipes OX=19744 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-28
Identity = 55/98 (56.12%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVFAY+++I+A YDLV +T++LGRLP +++AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 116 MDDDEVFAYAKKISAAYDLVMQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGS 175

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            +F+  +P  R R +++AV ++SDP+ L R  FG G A
Sbjct: 176 GVFKSGDPAKRARAIVQAVTHYSDPDLLGRGEFGLGEA 213

[Close]

BLAST of Chy1G020690 vs. ExPASy Swiss-Prot
Match: Q69LA6 (Probable pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Oryza sativa subsp. japonica OX=39947 GN=PDX11 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-28
Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF+Y++ IAAPYDLV +T++LGRLP + +AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 202 MDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGS 261

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            IF+  +P  R R +++AV ++SDP+ LA  + G G A
Sbjct: 262 GIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEA 299

[Close]

BLAST of Chy1G020690 vs. ExPASy Swiss-Prot
Match: Q8W3D0 (Probable pyridoxal 5'-phosphate synthase subunit PDX1.2 OS=Oryza sativa subsp. japonica OX=39947 GN=PDX12 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-28
Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF+Y++ IAAPYDLV +T++LGRLP + +AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 195 MDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGS 254

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            IF+  +P  R R +++AV ++SDP+ LA  + G G A
Sbjct: 255 GIFKSGDPALRARAIVQAVTHYSDPKILAEVSSGLGEA 292

[Close]

BLAST of Chy1G020690 vs. ExPASy Swiss-Prot
Match: Q39963 (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis OX=3981 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.5e-28
Identity = 54/98 (55.10%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF ++++IAAPYDLV +T++LGRLP + +AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 193 MDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGS 252

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            +F+  +P  R R +++AV ++SDP+ LA  + G G A
Sbjct: 253 GVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEA 290

[Close]

BLAST of Chy1G020690 vs. ExPASy TrEMBL
Match: A0A0A0K936 (SOR_SNZ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446840 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-48
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGI+TPADAALMMQLGCDGIFLGL
Sbjct: 191 MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIVTPADAALMMQLGCDGIFLGL 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
           EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA
Sbjct: 251 EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 288

[Close]

BLAST of Chy1G020690 vs. ExPASy TrEMBL
Match: A0A1S3CH05 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Cucumis melo OX=3656 GN=LOC103500799 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.0e-40
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MDE+EVFAYS++I APYDLVKETRELGRLPAI+YAAGGI+TPADAALMMQLGCDGIFLGL
Sbjct: 191 MDEDEVFAYSQKIGAPYDLVKETRELGRLPAIYYAAGGIVTPADAALMMQLGCDGIFLGL 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGP 98
           EIFE PNPRDRLRRM+EAVRNH +PEAL RA+F   P
Sbjct: 251 EIFECPNPRDRLRRMVEAVRNHRNPEALVRASFDLAP 287

[Close]

BLAST of Chy1G020690 vs. ExPASy TrEMBL
Match: A0A5D3BYT2 (Pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002310 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MDE+EVFAYS++I APYDLVKETRELGRLP I+YAAGGI+TPADAALMMQLGCDGIFL L
Sbjct: 191 MDEDEVFAYSQKIDAPYDLVKETRELGRLPGIYYAAGGIVTPADAALMMQLGCDGIFLAL 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGP 98
           EIFE PNPRDRLRRM+EAVRNH +PEAL RA+F   P
Sbjct: 251 EIFECPNPRDRLRRMVEAVRNHRNPEALVRASFDLAP 287

[Close]

BLAST of Chy1G020690 vs. ExPASy TrEMBL
Match: A0A6J1CW07 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Momordica charantia OX=3673 GN=LOC111015088 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 73/98 (74.49%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVFA++ +IAAPYDLVKETR++ RLPAIHYAAGGI TPADA LMMQLGCDGIF+GL
Sbjct: 193 MDDDEVFAFAEKIAAPYDLVKETRQICRLPAIHYAAGGISTPADAGLMMQLGCDGIFIGL 252

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
           EIF+  NPRDRLRRM+ AV+N++DP  LA A+FGFG A
Sbjct: 253 EIFDCANPRDRLRRMVLAVKNYNDPNILAEASFGFGAA 290

[Close]

BLAST of Chy1G020690 vs. ExPASy TrEMBL
Match: A0A6J1KI63 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Cucurbita maxima OX=3661 GN=LOC111494636 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.5e-32
Identity = 65/96 (67.71%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           M+E+EVFA+S++I+APYD+VK+T+E+GRLPAI+YAAGGI TPADAALMMQLGCDGIF+GL
Sbjct: 188 MNEDEVFAFSQKISAPYDIVKKTKEIGRLPAINYAAGGIATPADAALMMQLGCDGIFVGL 247

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFG 97
           EIF++  P DRLR +++AV+ ++DP  LA+A+FG G
Sbjct: 248 EIFQFSKPCDRLRGIVQAVKGYNDPSVLAQASFGVG 283

[Close]

BLAST of Chy1G020690 vs. NCBI nr
Match: XP_004141845.1 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis sativus] >KGN45369.1 hypothetical protein Csa_016165 [Cucumis sativus])

HSP 1 Score: 200 bits (509), Expect = 3.68e-62
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGI+TPADAALMMQLGCDGIFLGL
Sbjct: 191 MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIVTPADAALMMQLGCDGIFLGL 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 98
           EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA
Sbjct: 251 EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 288

[Close]

BLAST of Chy1G020690 vs. NCBI nr
Match: XP_008462450.1 (PREDICTED: pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis melo])

HSP 1 Score: 172 bits (436), Expect = 5.53e-51
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MDE+EVFAYS++I APYDLVKETRELGRLPAI+YAAGGI+TPADAALMMQLGCDGIFLGL
Sbjct: 191 MDEDEVFAYSQKIGAPYDLVKETRELGRLPAIYYAAGGIVTPADAALMMQLGCDGIFLGL 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGP 97
           EIFE PNPRDRLRRM+EAVRNH +PEAL RA+F   P
Sbjct: 251 EIFECPNPRDRLRRMVEAVRNHRNPEALVRASFDLAP 287

[Close]

BLAST of Chy1G020690 vs. NCBI nr
Match: KAA0059296.1 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis melo var. makuwa] >TYK04032.1 pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (424), Expect = 3.56e-49
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MDE+EVFAYS++I APYDLVKETRELGRLP I+YAAGGI+TPADAALMMQLGCDGIFL L
Sbjct: 191 MDEDEVFAYSQKIDAPYDLVKETRELGRLPGIYYAAGGIVTPADAALMMQLGCDGIFLAL 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGP 97
           EIFE PNPRDRLRRM+EAVRNH +PEAL RA+F   P
Sbjct: 251 EIFECPNPRDRLRRMVEAVRNHRNPEALVRASFDLAP 287

[Close]

BLAST of Chy1G020690 vs. NCBI nr
Match: XP_038897062.1 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 isoform X1 [Benincasa hispida])

HSP 1 Score: 164 bits (415), Expect = 5.86e-48
Identity = 77/98 (78.57%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           M+++EVFA+S++IAAPYDLVKET+ELGRLPAIHYAAGGI+TPADAALMMQLGCDGIFLG 
Sbjct: 191 MNDDEVFAFSKKIAAPYDLVKETKELGRLPAIHYAAGGIVTPADAALMMQLGCDGIFLGS 250

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 98
           EIF+YPN RDRLR MI+AVRN+++PE LA  +FGFG A
Sbjct: 251 EIFDYPNHRDRLRGMIKAVRNYNNPEVLAEVSFGFGAA 288

[Close]

BLAST of Chy1G020690 vs. NCBI nr
Match: XP_022145699.1 (pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Momordica charantia])

HSP 1 Score: 157 bits (396), Expect = 4.49e-45
Identity = 73/98 (74.49%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVFA++ +IAAPYDLVKETR++ RLPAIHYAAGGI TPADA LMMQLGCDGIF+GL
Sbjct: 193 MDDDEVFAFAEKIAAPYDLVKETRQICRLPAIHYAAGGISTPADAGLMMQLGCDGIFIGL 252

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 98
           EIF+  NPRDRLRRM+ AV+N++DP  LA A+FGFG A
Sbjct: 253 EIFDCANPRDRLRRMVLAVKNYNDPNILAEASFGFGAA 290

[Close]

BLAST of Chy1G020690 vs. TAIR 10
Match: AT5G01410.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-29
Identity = 54/98 (55.10%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF +++++AAPYDLV +T++LGRLP + +AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 193 MDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGS 252

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            IF+  +P  R R +++AV ++SDPE L   + G G A
Sbjct: 253 GIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEA 290

[Close]

BLAST of Chy1G020690 vs. TAIR 10
Match: AT3G16050.1 (pyridoxine biosynthesis 1.2 )

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-28
Identity = 50/94 (53.19%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF ++++I+APYDLV +T+++GR+P + +A+GGI TPADAALMMQLGCDG+F+G 
Sbjct: 198 MDDDEVFTFAKKISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGS 257

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFG 95
           E+F+ P+P  +LR +++AV++++DP  LA  + G
Sbjct: 258 EVFDGPDPFKKLRSIVQAVQHYNDPHVLAEMSSG 291

[Close]

BLAST of Chy1G020690 vs. TAIR 10
Match: AT2G38230.1 (pyridoxine biosynthesis 1.1 )

HSP 1 Score: 121.7 bits (304), Expect = 3.3e-28
Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 1   MDENEVFAYSREIAAPYDLVKETRELGRLPAIHYAAGGIMTPADAALMMQLGCDGIFLGL 60
           MD++EVF Y+++IAAPYDLV +T+ELGRLP + +AAGG+ TPADAALMMQLGCDG+F+G 
Sbjct: 194 MDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGS 253

Query: 61  EIFEYPNPRDRLRRMIEAVRNHSDPEALARAAFGFGPA 99
            +F+  +P  R + +++AV N+ D   LA  + G G A
Sbjct: 254 GVFKSGDPVKRAKAIVQAVTNYRDAAVLAEVSCGLGEA 291

The following BLAST results are available for this feature:

BLAST of Chy1G020690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT25	2.9e-29	57.14	Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris OX=3885 GN=PD...	[more]
Q41348	1.1e-28	56.12	Probable pyridoxal 5'-phosphate synthase subunit PDX1 (Fragment) OS=Stellaria lo...	[more]
Q69LA6	1.9e-28	57.14	Probable pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Oryza sativa subsp. j...	[more]
Q8W3D0	3.2e-28	57.14	Probable pyridoxal 5'-phosphate synthase subunit PDX1.2 OS=Oryza sativa subsp. j...	[more]
Q39963	5.5e-28	55.10	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis OX=3...	[more]

BLAST of Chy1G020690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K936	2.2e-48	98.98	SOR_SNZ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446840 PE=...	[more]
A0A1S3CH05	5.0e-40	84.54	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5D3BYT2	1.2e-38	82.47	Pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Cucumis melo var. makuwa ...	[more]
A0A6J1CW07	2.8e-35	74.49	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Momordica charantia OX=36...	[more]
A0A6J1KI63	8.5e-32	67.71	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Chy1G020690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141845.1	3.68e-62	98.98	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis sativus] >KGN45369....	[more]
XP_008462450.1	5.53e-51	84.54	PREDICTED: pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis melo]	[more]
KAA0059296.1	3.56e-49	82.47	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Cucumis melo var. makuwa] >...	[more]
XP_038897062.1	5.86e-48	78.57	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 isoform X1 [Benincasa hispid...	[more]
XP_022145699.1	4.49e-45	74.49	pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Momordica charantia]	[more]

BLAST of Chy1G020690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01410.1	6.6e-29	55.10	Aldolase-type TIM barrel family protein	[more]
AT3G16050.1	1.1e-28	53.19	pyridoxine biosynthesis 1.2	[more]
AT2G38230.1	3.3e-28	55.10	pyridoxine biosynthesis 1.1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 1..98 e-value: 1.9E-33 score: 117.7
IPR033755	PdxS/SNZ N-terminal domain	PFAM	PF01680	SOR_SNZ	coord: 1..36 e-value: 4.6E-5 score: 23.3
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PANTHER	PTHR31829	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED	coord: 1..95
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PROSITE	PS51129	PDXS_SNZ_2	coord: 1..98 score: 28.29804
None	No IPR available	PANTHER	PTHR31829:SF2	PYRIDOXAL 5'-PHOSPHATE SYNTHASE-LIKE SUBUNIT PDX1.2	coord: 1..95
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 11..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G020690.1	Chy1G020690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0042823	pyridoxal phosphate biosynthetic process
biological_process	GO:0008615	pyridoxine biosynthetic process
biological_process	GO:0042819	vitamin B6 biosynthetic process
molecular_function	GO:0016843	amine-lyase activity
molecular_function	GO:0003824	catalytic activity