Chy1G007200 (gene) Cucumber (hystrix) v1

Overview
NameChy1G007200
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH01: 5236169 .. 5236763 (+)
RNA-Seq ExpressionChy1G007200
SyntenyChy1G007200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAGAGTCTTTCCGTATTCCAACTCTCAAAAGAGATTTTAAAATTTTGTATTCCTTTGTGTCTCATATTTCAAATCTTGAAACATATTACAACATGGGTTTCCATCTGCCTCGAATTGTTACTGCTAAGAAAAGTCTACAACGATCTTCATCAACAGGAAATGGAGAATCTCCAAAAGCTGTCAATGTTCCTAAGGGTTATTTTACCGTTTATGTCGGTGAGGAAAAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGCTGAGTCAAGCAGAAGAAGAATTTGGACACAATCATCCAATGGGTGGCATCACAATTCCTTGTAGTGAAGAAATTTTTCAAAATCTCACTCAGAGTTTGTATGACTCGTAAAGTAGAGAGATTACCATCTAGAAATAGATAGGATAGAAAAGGACTAGATTAGTGCAAAATTTATACAGTGTAAACACTTTTTCAATAAGAGAACTCTATTCATTCAAACTATTCTATGGTGTACTTTAATCTTTTCATTACTAAAGCTAGATGATGATACAACTTGAATGATATTAATGTTGGAAAATTCTTCTTTC

mRNA sequence

AACAAGAGTCTTTCCGTATTCCAACTCTCAAAAGAGATTTTAAAATTTTGTATTCCTTTGTGTCTCATATTTCAAATCTTGAAACATATTACAACATGGGTTTCCATCTGCCTCGAATTGTTACTGCTAAGAAAAGTCTACAACGATCTTCATCAACAGGAAATGGAGAATCTCCAAAAGCTGTCAATGTTCCTAAGGGTTATTTTACCGTTTATGTCGGTGAGGAAAAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGCTGAGTCAAGCAGAAGAAGAATTTGGACACAATCATCCAATGGGTGGCATCACAATTCCTTGTAGTGAAGAAATTTTTCAAAATCTCACTCAGAGTTTGTATGACTCGTAAAGTAGAGAGATTACCATCTAGAAATAGATAGGATAGAAAAGGACTAGATTAGTGCAAAATTTATACAGTGTAAACACTTTTTCAATAAGAGAACTCTATTCATTCAAACTATTCTATGGTGTACTTTAATCTTTTCATTACTAAAGCTAGATGATGATACAACTTGAATGATATTAATGTTGGAAAATTCTTCTTTC

Coding sequence (CDS)

AACAAGAGTCTTTCCGTATTCCAACTCTCAAAAGAGATTTTAAAATTTTGTATTCCTTTGTGTCTCATATTTCAAATCTTGAAACATATTACAACATGGGTTTCCATCTGCCTCGAATTGTTACTGCTAAGAAAAGTCTACAACGATCTTCATCAACAGGAAATGGAGAATCTCCAAAAGCTGTCAATGTTCCTAAGGGTTATTTTACCGTTTATGTCGGTGAGGAAAAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGCTGAGTCAAGCAGAAGAAGAATTTGGACACAATCATCCAATGGGTGGCATCACAATTCCTTGTAGTGAAGAAATTTTTCAAAATCTCACTCAGAGTTTGTATGACTCGTAAAGTAGAGAGATTACCATCTAGAAATAGATAGGATAGAAAAGGACTAGATTAGTGCAAAATTTATACAGTGTAAACACTTTTTCAATAAGAGAACTCTATTCATTCAAACTATTCTATGGTGTACTTTAATCTTTTCATTACTAAAGCTAGATGATGATACAACTTGAATGATATTAATGTTGGAAAATTCTTCTTTC

Protein sequence

NKSLSVFQLSKEILKFCIPLCLIFQILKHITTWVSICLELLLLRKVYNDLHQQEMENLQKLSMFLRVILPFMSVRKKRSVLSSHYLT*TSLLFKIC*VKQKKNLDTIIQWVASQFLVVKKFFKISLRVCMTRKVERLPSRNR*DRKGLD*CKIYTV*TLFQ*ENSIHSNYSMVYFNLFITKAR**YNLNDINVGKFFFX
Homology
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BLAST of Chy1G007200 vs. ExPASy TrEMBL
Match: A0A0A0K5T4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008970 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33
Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  NKSLSVFQLSKEILKFCIPLCLIFQILKHITTWVSICLELLLLRKVYNDLHQQEMENLQK 60
          NKSLSVFQLSKEI KFCIPLCLIFQI KHITTWVS+CLELLLL KV++DLHQQEMENLQK
Sbjct: 8  NKSLSVFQLSKEISKFCIPLCLIFQIFKHITTWVSVCLELLLLSKVFSDLHQQEMENLQK 67

Query: 61 LSMFLRVILPFMSVRKKRSVLSSHYLT 88
          L MFLR ILPFMSVR KRSVLSSHYLT
Sbjct: 68 LLMFLRAILPFMSVRNKRSVLSSHYLT 94

The following BLAST results are available for this feature:
BLAST of Chy1G007200 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G007200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5T43.1e-3389.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008970 PE=4 SV=1[more]
BLAST of Chy1G007200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Chy1G007200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G007200.1Chy1G007200.1mRNA