Chy12G211730 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G211730
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Kinesin-like protein KIN12B
Location	chrH12: 8084449 .. 8084685 (+)
RNA-Seq Expression	Chy12G211730
Synteny	Chy12G211730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGGTGAAAGAGAAGTGCTAATGGAAGAGATTCATGATTTAAGAAATCGGCTGCAATACTACATTGATTCACCCTCTGCATCCTTGCGAAAGCAAAATTCTATTTTACAATTGACTTATTCTGAGCCTACCGTTGCTCCACCTCTTAGTGCAATTCTTGAATCAATAGAAGAGAGTGCTGAGAAGAAACTTGAGCAGGATGGAGCTTGTTCGACTGAGGAGGAGAGCAAATGA

mRNA sequence

ATGACGGGTGAAAGAGAAGTGCTAATGGAAGAGATTCATGATTTAAGAAATCGGCTGCAATACTACATTGATTCACCCTCTGCATCCTTGCGAAAGCAAAATTCTATTTTACAATTGACTTATTCTGAGCCTACCGTTGCTCCACCTCTTAGTGCAATTCTTGAATCAATAGAAGAGAGTGCTGAGAAGAAACTTGAGCAGGATGGAGCTTGTTCGACTGAGGAGGAGAGCAAATGA

Coding sequence (CDS)

ATGACGGGTGAAAGAGAAGTGCTAATGGAAGAGATTCATGATTTAAGAAATCGGCTGCAATACTACATTGATTCACCCTCTGCATCCTTGCGAAAGCAAAATTCTATTTTACAATTGACTTATTCTGAGCCTACCGTTGCTCCACCTCTTAGTGCAATTCTTGAATCAATAGAAGAGAGTGCTGAGAAGAAACTTGAGCAGGATGGAGCTTGTTCGACTGAGGAGGAGAGCAAATGA

Protein sequence

MTGEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAEKKLEQDGACSTEEESK*

Homology

[Close]

BLAST of Chy12G211730 vs. ExPASy Swiss-Prot
Match: Q8L7Y8 (Kinesin-like protein KIN-12B OS=Arabidopsis thaliana OX=3702 GN=KIN12B PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.7e-12
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYS-EPTVAPPLSAILESIEESA 62
            GEREVL+EEIHDL+ +LQ Y DS   S R++ S+L+LTY+ +P  AP L+ I ES++E  
Sbjct: 981  GEREVLLEEIHDLKAQLQCYTDSSLTSARRRGSLLKLTYACDPNQAPQLNTIPESVDEGP 1040

Query: 63   EKKLEQDGACSTEEES 78
            EK LEQ+    TE ES
Sbjct: 1041 EKTLEQERLRWTEAES 1056

[Close]

BLAST of Chy12G211730 vs. ExPASy Swiss-Prot
Match: Q9LDN0 (Kinesin-like protein KIN-12A OS=Arabidopsis thaliana OX=3702 GN=KIN12A PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.1e-10
Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVL+EEI DL+ +LQ YID    S  K  ++L+L+Y     APP++AI ES +ES E
Sbjct: 971  GEREVLLEEIQDLKLQLQCYIDPSLKSALKTCTLLKLSYQ----APPVNAIPESQDESLE 1030

Query: 63   KKLEQDGACSTEEESK 79
            K LEQ+  C TE E+K
Sbjct: 1031 KTLEQERLCWTEAETK 1042

[Close]

BLAST of Chy12G211730 vs. ExPASy TrEMBL
Match: A0A5A7VH00 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold70G00190 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-23
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNS+LQLTYSEPTVAPPL AI ES EESAE
Sbjct: 1023 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSVLQLTYSEPTVAPPLGAIPESTEESAE 1082

Query: 63   KKLEQDGACSTEEESK 79
            +KLEQ+ A  TEEESK
Sbjct: 1083 EKLEQERARWTEEESK 1098

[Close]

BLAST of Chy12G211730 vs. ExPASy TrEMBL
Match: A0A5D3DJ90 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00200 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-23
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNS+LQLTYSEPTVAPPL AI ES EESAE
Sbjct: 1015 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSVLQLTYSEPTVAPPLGAIPESTEESAE 1074

Query: 63   KKLEQDGACSTEEESK 79
            +KLEQ+ A  TEEESK
Sbjct: 1075 EKLEQERARWTEEESK 1090

[Close]

BLAST of Chy12G211730 vs. ExPASy TrEMBL
Match: A0A1S3AXT5 (kinesin-like protein KIN12B OS=Cucumis melo OX=3656 GN=LOC103483961 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.7e-23
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNS+LQLTYSEPTVAPPL AI ES EESAE
Sbjct: 998  GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSVLQLTYSEPTVAPPLGAIPESTEESAE 1057

Query: 63   KKLEQDGACSTEEESK 79
            +KLEQ+ A  +EEESK
Sbjct: 1058 EKLEQERARWSEEESK 1073

[Close]

BLAST of Chy12G211730 vs. ExPASy TrEMBL
Match: A0A0A0L899 (Kinesin motor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G172990 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNSILQLTYSEPTVAP L AI ES EESAE
Sbjct: 1013 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSILQLTYSEPTVAPSLGAIPESTEESAE 1072

Query: 63   KKLEQDGACSTEEESK 79
            +K+EQ+ A  TEEESK
Sbjct: 1073 EKIEQERARWTEEESK 1088

[Close]

BLAST of Chy12G211730 vs. ExPASy TrEMBL
Match: A0A6J1C9V0 (kinesin-like protein KIN-12B OS=Momordica charantia OX=3673 GN=LOC111009274 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.9e-20
Identity = 58/76 (76.32%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQN  LQLTYSEP++APPL  I ES EESAE
Sbjct: 1013 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNPPLQLTYSEPSIAPPLGVIPESTEESAE 1072

Query: 63   KKLEQDGACSTEEESK 79
            +KLEQ+    TE ESK
Sbjct: 1073 EKLEQERVRWTEAESK 1088

[Close]

BLAST of Chy12G211730 vs. NCBI nr
Match: TYK23655.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (300), Expect = 2.43e-29
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNS+LQLTYSEPTVAPPL AI ES EESAE
Sbjct: 1015 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSVLQLTYSEPTVAPPLGAIPESTEESAE 1074

Query: 63   KKLEQDGACSTEEESK 78
            +KLEQ+ A  TEEESK
Sbjct: 1075 EKLEQERARWTEEESK 1090

[Close]

BLAST of Chy12G211730 vs. NCBI nr
Match: KAA0067652.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (300), Expect = 2.43e-29
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNS+LQLTYSEPTVAPPL AI ES EESAE
Sbjct: 1023 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSVLQLTYSEPTVAPPLGAIPESTEESAE 1082

Query: 63   KKLEQDGACSTEEESK 78
            +KLEQ+ A  TEEESK
Sbjct: 1083 EKLEQERARWTEEESK 1098

[Close]

BLAST of Chy12G211730 vs. NCBI nr
Match: XP_008439062.1 (PREDICTED: kinesin-like protein KIN12B [Cucumis melo])

HSP 1 Score: 118 bits (296), Expect = 8.42e-29
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNS+LQLTYSEPTVAPPL AI ES EESAE
Sbjct: 998  GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSVLQLTYSEPTVAPPLGAIPESTEESAE 1057

Query: 63   KKLEQDGACSTEEESK 78
            +KLEQ+ A  +EEESK
Sbjct: 1058 EKLEQERARWSEEESK 1073

[Close]

BLAST of Chy12G211730 vs. NCBI nr
Match: XP_011651111.1 (kinesin-like protein KIN-12B [Cucumis sativus] >KGN57244.1 hypothetical protein Csa_010959 [Cucumis sativus])

HSP 1 Score: 116 bits (291), Expect = 3.99e-28
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEEI DLR++LQYYIDSPSASLRKQNSILQLTYSEPTVAP L AI ES EESAE
Sbjct: 1013 GEREVLMEEIQDLRSQLQYYIDSPSASLRKQNSILQLTYSEPTVAPSLGAIPESTEESAE 1072

Query: 63   KKLEQDGACSTEEESK 78
            +K+EQ+ A  TEEESK
Sbjct: 1073 EKIEQERARWTEEESK 1088

[Close]

BLAST of Chy12G211730 vs. NCBI nr
Match: QWT43326.1 (kinesin-like protein KIN12E [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 112 bits (280), Expect = 1.22e-26
Identity = 59/76 (77.63%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVLMEE+ DLR++LQYYIDSPS SLRKQN++LQLTYSEP+ APPL AI ES EESAE
Sbjct: 975  GEREVLMEELQDLRSQLQYYIDSPSTSLRKQNALLQLTYSEPSSAPPLGAIPESTEESAE 1034

Query: 63   KKLEQDGACSTEEESK 78
            +KLEQ+ A  TEEESK
Sbjct: 1035 EKLEQERARWTEEESK 1050

[Close]

BLAST of Chy12G211730 vs. TAIR 10
Match: AT3G23670.1 (phragmoplast-associated kinesin-related protein, putative )

HSP 1 Score: 71.2 bits (173), Expect = 4.1e-13
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYS-EPTVAPPLSAILESIEESA 62
            GEREVL+EEIHDL+ +LQ Y DS   S R++ S+L+LTY+ +P  AP L+ I ES++E  
Sbjct: 981  GEREVLLEEIHDLKAQLQCYTDSSLTSARRRGSLLKLTYACDPNQAPQLNTIPESVDEGP 1040

Query: 63   EKKLEQDGACSTEEES 78
            EK LEQ+    TE ES
Sbjct: 1041 EKTLEQERLRWTEAES 1056

[Close]

BLAST of Chy12G211730 vs. TAIR 10
Match: AT4G14150.1 (phragmoplast-associated kinesin-related protein 1 )

HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11
Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 3    GEREVLMEEIHDLRNRLQYYIDSPSASLRKQNSILQLTYSEPTVAPPLSAILESIEESAE 62
            GEREVL+EEI DL+ +LQ YID    S  K  ++L+L+Y     APP++AI ES +ES E
Sbjct: 971  GEREVLLEEIQDLKLQLQCYIDPSLKSALKTCTLLKLSYQ----APPVNAIPESQDESLE 1030

Query: 63   KKLEQDGACSTEEESK 79
            K LEQ+  C TE E+K
Sbjct: 1031 KTLEQERLCWTEAETK 1042

[Close]

BLAST of Chy12G211730 vs. TAIR 10
Match: AT3G23670.2 (phragmoplast-associated kinesin-related protein, putative )

HSP 1 Score: 55.5 bits (132), Expect = 2.3e-08
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 12  IHDLRNRLQYYIDSPSASLRKQNSILQLTYS-EPTVAPPLSAILESIEESAEKKLEQDGA 71
           IHDL+ +LQ Y DS   S R++ S+L+LTY+ +P  AP L+ I ES++E  EK LEQ+  
Sbjct: 648 IHDLKAQLQCYTDSSLTSARRRGSLLKLTYACDPNQAPQLNTIPESVDEGPEKTLEQERL 707

Query: 72  CSTEEES 78
             TE ES
Sbjct: 708 RWTEAES 714

The following BLAST results are available for this feature:

BLAST of Chy12G211730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7Y8	5.7e-12	53.95	Kinesin-like protein KIN-12B OS=Arabidopsis thaliana OX=3702 GN=KIN12B PE=1 SV=1	[more]
Q9LDN0	4.1e-10	52.63	Kinesin-like protein KIN-12A OS=Arabidopsis thaliana OX=3702 GN=KIN12A PE=1 SV=1	[more]

BLAST of Chy12G211730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VH00	2.0e-23	84.21	Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3DJ90	2.0e-23	84.21	Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AXT5	5.7e-23	82.89	kinesin-like protein KIN12B OS=Cucumis melo OX=3656 GN=LOC103483961 PE=3 SV=1	[more]
A0A0A0L899	2.2e-22	82.89	Kinesin motor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1729...	[more]
A0A6J1C9V0	5.9e-20	76.32	kinesin-like protein KIN-12B OS=Momordica charantia OX=3673 GN=LOC111009274 PE=3...	[more]

BLAST of Chy12G211730 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23655.1	2.43e-29	84.21	kinesin-like protein KIN12B [Cucumis melo var. makuwa]	[more]
KAA0067652.1	2.43e-29	84.21	kinesin-like protein KIN12B [Cucumis melo var. makuwa]	[more]
XP_008439062.1	8.42e-29	82.89	PREDICTED: kinesin-like protein KIN12B [Cucumis melo]	[more]
XP_011651111.1	3.99e-28	82.89	kinesin-like protein KIN-12B [Cucumis sativus] >KGN57244.1 hypothetical protein ...	[more]
QWT43326.1	1.22e-26	77.63	kinesin-like protein KIN12E [Citrullus lanatus subsp. vulgaris]	[more]

BLAST of Chy12G211730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23670.1	4.1e-13	53.95	phragmoplast-associated kinesin-related protein, putative	[more]
AT4G14150.1	2.9e-11	52.63	phragmoplast-associated kinesin-related protein 1	[more]
AT3G23670.2	2.3e-08	49.25	phragmoplast-associated kinesin-related protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027640	Kinesin-like protein	PANTHER	PTHR24115	KINESIN-RELATED	coord: 2..65
None	No IPR available	PANTHER	PTHR24115:SF938	KINESIN-LIKE PROTEIN	coord: 2..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G211730.1	Chy12G211730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
cellular_component	GO:0005871	kinesin complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0008574	plus-end-directed microtubule motor activity