Chy12G210790 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCAGGAGAACAAATTCAAAATTTATCCAAGGGCTCTAAATATTACATGGGGTAGTGATAGACGATACTGGACCATACCTCGTCGAGACCCGTAAGCTTCAACTTTCTAATTTTTCTCTATTTTATTATATTTTGATGCTTAGCTTCCTTTTCATAGAACATAAATTCAACTTTAATTTTCCAACCCACCACAATTTAACCAATTTAGGTATATATACTTTTCATGCATAAGAAGAAAAAAAAAAAGAAAGAAATTCTTATCCCATACCATATATATGTTAAATACCGAAATAATAATAAAGAAAATATACTTTTTTGTTCTAATGCTTTGAGTAATGGGTATATCTGGTTCCTTGAAGGTTCAAAATAGAAGTTTTTAGTCAGTATGTTTCGAAAAATAAGAGTTTTTTTGTTTGATTTTGATCGATTTTTGGTCTCTAATTGGTGACATCTTATATAAAAATGGAGTTTGGGGTAAGAGATGGAAAAAGAAGTTTAATGAAGGTTGAGGTGCCGGAAAAAATGGAAGAAGAAGTGGCGGAAGAGGAGGTTGAGGTGAAGGTTGGTGAAGGACAAGTGTGAGAGAGAGAGGGAGAGAGAAGTGAGAGAAAGAGGGGTTTCTGTTTTTTATTCTTATTTTGTTTGTTTGTTACATTTTATAATTTCTACATCAGCATTATTTAGGAGTTTACATTTTATAAAACATAACTCCTTTTGGCTAATGTAAATGTAGCCATTATCTTTATATAGACAACTTCTATGGTGATATTTAATTAAGAAATTATGTTTTACTTGTTTGATCAAATTAAATAACAAATGCAAAAAAATAAAATAGGCATAGAATGTGTCAACATTAAATATAATATTGATGAGGAGGGTAAGTAAATGTCAAAAGCATAGTCTATTAATTTGAACTTTATTGACTGGGTGGGCGATTTATGTAGGACGACGGATGATGAAGATAAAGATTTTTTTGCTGAGTTAAAACAAGTATGTTGGTTAGAAGTAACAGGTTCAACGAACAAAGATCTTGTGCCTGACAAAAAGTACAAAGTTTCTTTTGGTGTCTCACTAGGACCCGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAAATTGGTAAAAAGGGAAATTTCCTTTTCCAGAAAATGAATCTTACAACCATACATACAACTGATGCAAAAATTGACTTGATTCCTACAACTGAATTGAGTGTTACAGTCCCTGCGGCCAAAACTGATAATAATAATGATGATCTAAAGCTCTACTTTGGTCTCTATGAAGTTTGGACCAATAGGTGGAAGGGAGGGTTGAGGATCCATTATGCATTGGTTGAGATGCATGGTTCTAATAATGACACTGTACCCAATCACACACAATAA ATGTTTCAGGAGAACAAATTCAAAATTTATCCAAGGGCTCTAAATATTACATGGGGTAGTGATAGACGATACTGGACCATACCTCGTCGAGACCCGACGACGGATGATGAAGATAAAGATTTTTTTGCTGAGTTAAAACAAGTATGTTGGTTAGAAGTAACAGGTTCAACGAACAAAGATCTTGTGCCTGACAAAAAGTACAAAGTTTCTTTTGGTGTCTCACTAGGACCCGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAAATTGGTAAAAAGGGAAATTTCCTTTTCCAGAAAATGAATCTTACAACCATACATACAACTGATGCAAAAATTGACTTGATTCCTACAACTGAATTGAGTGTTACAGTCCCTGCGGCCAAAACTGATAATAATAATGATGATCTAAAGCTCTACTTTGGTCTCTATGAAGTTTGGACCAATAGGTGGAAGGGAGGGTTGAGGATCCATTATGCATTGGTTGAGATGCATGGTTCTAATAATGACACTGTACCCAATCACACACAATAA ATGTTTCAGGAGAACAAATTCAAAATTTATCCAAGGGCTCTAAATATTACATGGGGTAGTGATAGACGATACTGGACCATACCTCGTCGAGACCCGACGACGGATGATGAAGATAAAGATTTTTTTGCTGAGTTAAAACAAGTATGTTGGTTAGAAGTAACAGGTTCAACGAACAAAGATCTTGTGCCTGACAAAAAGTACAAAGTTTCTTTTGGTGTCTCACTAGGACCCGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAAATTGGTAAAAAGGGAAATTTCCTTTTCCAGAAAATGAATCTTACAACCATACATACAACTGATGCAAAAATTGACTTGATTCCTACAACTGAATTGAGTGTTACAGTCCCTGCGGCCAAAACTGATAATAATAATGATGATCTAAAGCTCTACTTTGGTCTCTATGAAGTTTGGACCAATAGGTGGAAGGGAGGGTTGAGGATCCATTATGCATTGGTTGAGATGCATGGTTCTAATAATGACACTGTACCCAATCACACACAATAA MFQENKFKIYPRALNITWGSDRRYWTIPRRDPTTDDEDKDFFAELKQVCWLEVTGSTNKDLVPDKKYKVSFGVSLGPDAFGWDDCSVYIMAKIGKKGNFLFQKMNLTTIHTTDAKIDLIPTTELSVTVPAAKTDNNNDDLKLYFGLYEVWTNRWKGGLRIHYALVEMHGSNNDTVPNHTQ* Homology
BLAST of Chy12G210790 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-27 Identity = 71/178 (39.89%), Postives = 91/178 (51.12%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07 Identity = 31/81 (38.27%), Postives = 41/81 (50.62%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 7.7e-04 Identity = 25/78 (32.05%), Postives = 38/78 (48.72%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy TrEMBL
Match: A0A0A0M0X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G709160 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81 Identity = 148/176 (84.09%), Postives = 159/176 (90.34%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy TrEMBL
Match: A0A1S3C8T6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498275 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.5e-68 Identity = 131/181 (72.38%), Postives = 144/181 (79.56%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy TrEMBL
Match: A0A6J1K456 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490487 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45 Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy TrEMBL
Match: A0A6J1CNK5 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012653 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 3.3e-42 Identity = 92/163 (56.44%), Postives = 109/163 (66.87%), Query Frame = 0
BLAST of Chy12G210790 vs. ExPASy TrEMBL
Match: A0A6J1GSJ8 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456742 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 2.2e-41 Identity = 91/161 (56.52%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Chy12G210790 vs. NCBI nr
Match: XP_004151321.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66904.1 hypothetical protein Csa_007408 [Cucumis sativus]) HSP 1 Score: 308 bits (790), Expect = 1.26e-104 Identity = 148/176 (84.09%), Postives = 159/176 (90.34%), Query Frame = 0
BLAST of Chy12G210790 vs. NCBI nr
Match: XP_008459053.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]) HSP 1 Score: 265 bits (678), Expect = 1.54e-87 Identity = 131/181 (72.38%), Postives = 144/181 (79.56%), Query Frame = 0
BLAST of Chy12G210790 vs. NCBI nr
Match: XP_038896030.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 229 bits (584), Expect = 1.17e-73 Identity = 108/165 (65.45%), Postives = 130/165 (78.79%), Query Frame = 0
BLAST of Chy12G210790 vs. NCBI nr
Match: XP_022994899.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 190 bits (483), Expect = 3.50e-58 Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of Chy12G210790 vs. NCBI nr
Match: XP_022142573.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Momordica charantia]) HSP 1 Score: 180 bits (456), Expect = 4.38e-54 Identity = 92/163 (56.44%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of Chy12G210790 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 124.8 bits (312), Expect = 7.1e-29 Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Chy12G210790 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28 Identity = 71/178 (39.89%), Postives = 91/178 (51.12%), Query Frame = 0
BLAST of Chy12G210790 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 ) HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04 Identity = 24/53 (45.28%), Postives = 28/53 (52.83%), Query Frame = 0
BLAST of Chy12G210790 vs. TAIR 10
Match: AT5G52120.1 (phloem protein 2-A14 ) HSP 1 Score: 42.4 bits (98), Expect = 4.7e-04 Identity = 23/68 (33.82%), Postives = 33/68 (48.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|