Chy12G206990 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTTGAGTTTGATGGGTTATTGAAGGGAACAGGGGATTTGAGAGGTAAAGTACTTGAAATGGAGAGAAATGAGAGAAGGGCATTGGAAGAGATTAGTGATTTGAAGGGAAAATGCAAGAAGTTGTTGAGTGAAAAAAAGGAATGTGAGATTTTGAATGTGAATCTGACGAAAGACAATGAATTGATTAAGAAGTTGTTGGAGGAATCAGGCAGGGTAATTGAAGATTTAGAGAGGAAAGTGGATGTGAAAATGTAG ATGAAGGTTGAGTTTGATGGGTTATTGAAGGGAACAGGGGATTTGAGAGGTAAAGTACTTGAAATGGAGAGAAATGAGAGAAGGGCATTGGAAGAGATTAGTGATTTGAAGGGAAAATGCAAGAAGTTGTTGAGTGAAAAAAAGGAATGTGAGATTTTGAATGTGAATCTGACGAAAGACAATGAATTGATTAAGAAGTTGTTGGAGGAATCAGGCAGGGTAATTGAAGATTTAGAGAGGAAAGTGGATGTGAAAATGTAG ATGAAGGTTGAGTTTGATGGGTTATTGAAGGGAACAGGGGATTTGAGAGGTAAAGTACTTGAAATGGAGAGAAATGAGAGAAGGGCATTGGAAGAGATTAGTGATTTGAAGGGAAAATGCAAGAAGTTGTTGAGTGAAAAAAAGGAATGTGAGATTTTGAATGTGAATCTGACGAAAGACAATGAATTGATTAAGAAGTTGTTGGAGGAATCAGGCAGGGTAATTGAAGATTTAGAGAGGAAAGTGGATGTGAAAATGTAG MKVEFDGLLKGTGDLRGKVLEMERNERRALEEISDLKGKCKKLLSEKKECEILNVNLTKDNELIKKLLEESGRVIEDLERKVDVKM* Homology
BLAST of Chy12G206990 vs. ExPASy TrEMBL
Match: A0A5D3D489 (Cingulin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00730 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32 Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Chy12G206990 vs. ExPASy TrEMBL
Match: A0A1S3C0Q0 (cingulin OS=Cucumis melo OX=3656 GN=LOC103495485 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32 Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Chy12G206990 vs. ExPASy TrEMBL
Match: A0A0A0LII4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G015350 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.1e-26 Identity = 69/86 (80.23%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Chy12G206990 vs. ExPASy TrEMBL
Match: A0A6J1FD80 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111444320 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 0
BLAST of Chy12G206990 vs. ExPASy TrEMBL
Match: A0A6J1HKX2 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111465485 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.1e-22 Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of Chy12G206990 vs. NCBI nr
Match: XP_011648795.1 (desmoplakin [Cucumis sativus] >KGN60890.2 hypothetical protein Csa_023473 [Cucumis sativus]) HSP 1 Score: 154 bits (389), Expect = 6.57e-42 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of Chy12G206990 vs. NCBI nr
Match: XP_008455286.1 (PREDICTED: cingulin [Cucumis melo]) HSP 1 Score: 147 bits (370), Expect = 4.73e-39 Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Chy12G206990 vs. NCBI nr
Match: KAA0063670.1 (cingulin [Cucumis melo var. makuwa] >TYK18356.1 cingulin [Cucumis melo var. makuwa]) HSP 1 Score: 147 bits (370), Expect = 4.73e-39 Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Chy12G206990 vs. NCBI nr
Match: XP_038889361.1 (paramyosin-like [Benincasa hispida]) HSP 1 Score: 135 bits (339), Expect = 1.05e-34 Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of Chy12G206990 vs. NCBI nr
Match: XP_022938144.1 (polyamine-modulated factor 1-binding protein 1 [Cucurbita moschata]) HSP 1 Score: 115 bits (288), Expect = 1.14e-27 Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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