Chy11G198640 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G198640
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	histone H4
Location	chrH11: 19026249 .. 19028229 (-)
RNA-Seq Expression	Chy11G198640
Synteny	Chy11G198640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGCCGTGGAAAGGGAGGAAAGGGGTTGGGGAAGGGAGGAGCAAAGCGTCACCGGAAGGTTTTGAGAGATAACATTCAGGGGATTACCAAGCCTGCCATTCGCCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACGAGAGGGGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACTTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCTATGGATGTTGTTTATGCCTTGAAAAGGCAGGGAAGGACTTTGTATGGTTTTGGAGGTTAGGTTATGGTTTTGGTCTAGATAATTGTTGTATAGGTTGTTTCTTTTTTGCTGGGTTTCTTTGTTTCTGCAAGTTCTTTTCTTATTGTTCTGGCAAAATGATAATGGTTCATTATCCAATTGTGCTTTTACGTTACTACCTGTCTCTCGCACCATTTCTCTCCCTCTTCTTCCGAATTTGAATCAACAAGAACTCAACAATCGACGAACTTAAGGTTTTATACAGTTGAATGAAGTTTGAATTTTTTAAACATTTGGTATGGGATTTAAACAACGTTTAACTTGGATCTCACGTTCCAATATTTAGGCACGCTTATTGTGAATTCAAGAATTTTTGTATTACTGATTTTCTAAATAATCACCAATCCAATTTGTTGAACAAGTTCTGGTAGTTATCTTACTCAAATAATTATGCTGAAGAATTGCAATCTTGGAAGTTGAAAGATCTGTGATGTAAAAGTTCTTGAATATAATAGATCCTTTTGTAATTATGTTATTTACATATACCATGGTATGATGTTTTATTATTCATGGTTGAATGAATCCAATTAAACTTGGACGACTTTGAACGTTTTGCTCGGTGCATGTGAAAGGTTTATTGAAAGACTTGCATTATATTCAAATGATCGTCCTTGATATTTGAGTCTAAACAACATAACCTTAAGGAATATCTACGTGCCACCAAAGAAAGATCTTTTGCAGAACTGTCAAGAAGAACAATCGTGAGTTTCTTGTTCTTTGCTGGCTATTTGGATTGATATATTTCATAATGGCGTTACTTCCCTATCATTATTTTGGTACTGCATCCTAGATTCAAAGCAGTTCACTTGTATCAGATGGTAGTTTTGTTAAGGGTTTGCAGATTGACAATCCTTACGATGCGTTTTAACATTGCATCTTCATGAGTTTAAGTAATCTGTTGTATTCACTGGCTACAGCTGCAACTTTTGTCTAAATGATGCCAATCCATCTTCTACTTAACTGGTGCTGTATGTTGAAGAGCAGCGTATGCATTTTCAATTTGTGCAGTAGTTCGGGGTCTTTTACAGCCTATGCGAATCCATCTTCATGCTTTTCCTAGATTGGGTTCTCAGGTACGACTCTTGAAGTTGATCTTTGTGTAGTCGGTGCATATTCTCAAAAATGCCTTGTTGGTGTTTCTTGCTGTAAGTTGATGTGCTAGAGCATTGCTAATGCTTAGAAAGTCTATTTATCATTGAGGTTTTCAAGCTTTGCTACTTGCTTGCTATCCTCCATTTATGTGGATTTAGAGGGGCACTTCCCTCGAGAAACAAAAGATATGCATACTGATATGTGATCTCAACTTCTTGATCGACTATCATAATATCATTTGTTAATGAGCGTTTGATCTCAACTAGGTTAAGTTCTTGAATATACGGCCGTTGGTCCAACGATTTAAAGCGAGCAAAAGAATGTCGGTTAAGCTCTTCCTTGAGGAAGCCCCATTTTGACGCTTGCTGCTTCACGAACAAATTCTTTTTCTGGACCACCACTGATGTTCTCTGTTGTAGTCTCATGACGTTGTATTTGCTTTTATTCTCGTCTTTACCAGTCCATCGTTGTACTTCTACATCCTTTGGATGGGTTGATTGAGATCTTTGCTATGTGCTTTTGGGATGTCATATCATATGCAGATCATATTTTCCATTAG

mRNA sequence

ATGTCTGGCCGTGGAAAGGGAGGAAAGGGGTTGGGGAAGGGAGGAGCAAAGCGTCACCGGAAGGTTTTGAGAGATAACATTCAGGGGATTACCAAGCCTGCCATTCGCCGTTTGGCTCGTAGAGGTGTAGTTCGGGGTCTTTTACAGCCTATGCGAATCCATCTTCATGCTTTTCCTAGATTGGGTTCTCAGTCCATCGTTGTACTTCTACATCCTTTGGATGGGTTGATTGAGATCTTTGCTATGTGCTTTTGGGATGTCATATCATATGCAGATCATATTTTCCATTAG

Coding sequence (CDS)

ATGTCTGGCCGTGGAAAGGGAGGAAAGGGGTTGGGGAAGGGAGGAGCAAAGCGTCACCGGAAGGTTTTGAGAGATAACATTCAGGGGATTACCAAGCCTGCCATTCGCCGTTTGGCTCGTAGAGGTGTAGTTCGGGGTCTTTTACAGCCTATGCGAATCCATCTTCATGCTTTTCCTAGATTGGGTTCTCAGTCCATCGTTGTACTTCTACATCCTTTGGATGGGTTGATTGAGATCTTTGCTATGTGCTTTTGGGATGTCATATCATATGCAGATCATATTTTCCATTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPRLGSQSIVVLLHPLDGLIEIFAMCFWDVISYADHIFH*

Homology

[Close]

BLAST of Chy11G198640 vs. ExPASy Swiss-Prot
Match: P62785 (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. ExPASy Swiss-Prot
Match: P70081 (Histone H4 type VIII OS=Gallus gallus OX=9031 GN=H4-VIII PE=3 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. ExPASy Swiss-Prot
Match: Q8MTV8 (Histone H4 OS=Aplysia californica OX=6500 GN=His.H4 PE=3 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. ExPASy Swiss-Prot
Match: P59259 (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. ExPASy Swiss-Prot
Match: Q27443 (Histone H4 OS=Ascaris suum OX=6253 PE=3 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. ExPASy TrEMBL
Match: A0A6L2P3H3 (Histone H4 OS=Tanacetum cinerariifolium OX=118510 GN=Tci_065016 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-14
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR---GLLQPMRIHLH 57
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+   GL+   R H H
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYXPRDHSH 59

[Close]

BLAST of Chy11G198640 vs. ExPASy TrEMBL
Match: G3MYX0 (Histone H4 OS=Bos taurus OX=9913 GN=LOC100847716 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+              R
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK--------------R 60

Query: 61 LGSQSIVVLLHPLDGLIEIF-AMCFWDVISYADH 94
          +      ++     G++++F     WD ++Y +H
Sbjct: 61 ISG----LIYEETRGVLKVFLENVIWDAVTYTEH 76

[Close]

BLAST of Chy11G198640 vs. ExPASy TrEMBL
Match: A0A4W2CUU2 (Histone H4 OS=Bos indicus x Bos taurus OX=30522 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+              R
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK--------------R 60

Query: 61 LGSQSIVVLLHPLDGLIEIF-AMCFWDVISYADH 94
          +      ++     G++++F     WD ++Y +H
Sbjct: 61 ISG----LIYEETRGVLKVFLENVIWDAVTYTEH 76

[Close]

BLAST of Chy11G198640 vs. ExPASy TrEMBL
Match: A0A6B0R253 (Histone H4 OS=Bos mutus OX=72004 GN=E5288_WYG001397 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+              R
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK--------------R 60

Query: 61 LGSQSIVVLLHPLDGLIEIF-AMCFWDVISYADH 94
          +      ++     G++++F     WD ++Y +H
Sbjct: 61 ISG----LIYEETRGVLKVFLENVIWDAVTYTEH 76

[Close]

BLAST of Chy11G198640 vs. ExPASy TrEMBL
Match: L8ILW5 (Histone H4 (Fragment) OS=Bos mutus OX=72004 GN=M91_12052 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+              R
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK--------------R 60

Query: 61 LGSQSIVVLLHPLDGLIEIF-AMCFWDVISYADH 94
          +      ++     G++++F     WD ++Y +H
Sbjct: 61 ISG----LIYEETRGVLKVFLENVIWDAVTYTEH 76

[Close]

BLAST of Chy11G198640 vs. NCBI nr
Match: KGN47199.2 (hypothetical protein Csa_020726 [Cucumis sativus])

HSP 1 Score: 137 bits (346), Expect = 1.07e-36
Identity = 85/150 (56.67%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG------------------ 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG                  
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  ------------------------------------------VVRGLLQPMRIHLHAFPR 90
                                                     VVRGLLQ M IHLHAFPR
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVVRGLLQRMPIHLHAFPR 120

[Close]

BLAST of Chy11G198640 vs. NCBI nr
Match: XP_028647454.1 (histone H4-like [Erpetoichthys calabaricus])

HSP 1 Score: 86.3 bits (212), Expect = 1.93e-19
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPM 51
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+G+  P+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKGISGPI 51

[Close]

BLAST of Chy11G198640 vs. NCBI nr
Match: TKR62784.1 (hypothetical protein L596_026701 [Steinernema carpocapsae])

HSP 1 Score: 85.9 bits (211), Expect = 2.45e-19
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVV        +   A P 
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVV--------VESSASPD 60

Query: 61 LGSQSIVVLLHPLDGLIEIFAMCFWDVISYADH 93
            ++ ++ +   L+G+I        D ++Y +H
Sbjct: 61 SSTRGVLKVF--LEGVIR-------DAVTYCEH 76

[Close]

BLAST of Chy11G198640 vs. NCBI nr
Match: XP_008992053.2 (histone H4 type VIII [Callithrix jacchus])

HSP 1 Score: 84.3 bits (207), Expect = 6.61e-19
Identity = 51/93 (54.84%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+              R
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGSVK--------------R 60

Query: 61 LGSQSIVVLLHPLDGLIEIFAMCFWDVISYADH 93
          +           L G +E      WD ++Y +H
Sbjct: 61 ISGLIYEETRGVLKGFLE---NVIWDAVTYTEH 76

[Close]

BLAST of Chy11G198640 vs. NCBI nr
Match: ELR57083.1 (hypothetical protein M91_12052, partial [Bos mutus])

HSP 1 Score: 84.3 bits (207), Expect = 8.67e-19
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVRGLLQPMRIHLHAFPR 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+              R
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK--------------R 60

Query: 61 LGSQSIVVLLHPLDGLIEIFAM-CFWDVISYADH 93
          +      ++     G++++F     WD ++Y +H
Sbjct: 61 ISG----LIYEETRGVLKVFLENVIWDAVTYTEH 76

[Close]

BLAST of Chy11G198640 vs. TAIR 10
Match: AT1G07660.1 (Histone superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. TAIR 10
Match: AT1G07820.1 (Histone superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. TAIR 10
Match: AT1G07820.2 (Histone superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. TAIR 10
Match: AT2G28740.1 (histone H4 )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

[Close]

BLAST of Chy11G198640 vs. TAIR 10
Match: AT3G45930.1 (Histone superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGVVR 46
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRG V+
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK 45

The following BLAST results are available for this feature:

BLAST of Chy11G198640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62785	2.3e-15	95.56	Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2	[more]
P70081	2.3e-15	95.56	Histone H4 type VIII OS=Gallus gallus OX=9031 GN=H4-VIII PE=3 SV=3	[more]
Q8MTV8	2.3e-15	95.56	Histone H4 OS=Aplysia californica OX=6500 GN=His.H4 PE=3 SV=3	[more]
P59259	2.3e-15	95.56	Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2	[more]
Q27443	2.3e-15	95.56	Histone H4 OS=Ascaris suum OX=6253 PE=3 SV=2	[more]

BLAST of Chy11G198640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6L2P3H3	7.8e-14	81.36	Histone H4 OS=Tanacetum cinerariifolium OX=118510 GN=Tci_065016 PE=3 SV=1	[more]
G3MYX0	1.3e-13	53.19	Histone H4 OS=Bos taurus OX=9913 GN=LOC100847716 PE=3 SV=1	[more]
A0A4W2CUU2	1.3e-13	53.19	Histone H4 OS=Bos indicus x Bos taurus OX=30522 PE=3 SV=1	[more]
A0A6B0R253	1.3e-13	53.19	Histone H4 OS=Bos mutus OX=72004 GN=E5288_WYG001397 PE=3 SV=1	[more]
L8ILW5	1.3e-13	53.19	Histone H4 (Fragment) OS=Bos mutus OX=72004 GN=M91_12052 PE=3 SV=1	[more]

BLAST of Chy11G198640 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47199.2	1.07e-36	56.67	hypothetical protein Csa_020726 [Cucumis sativus]	[more]
XP_028647454.1	1.93e-19	88.24	histone H4-like [Erpetoichthys calabaricus]	[more]
TKR62784.1	2.45e-19	55.91	hypothetical protein L596_026701 [Steinernema carpocapsae]	[more]
XP_008992053.2	6.61e-19	54.84	histone H4 type VIII [Callithrix jacchus]	[more]
ELR57083.1	8.67e-19	53.19	hypothetical protein M91_12052, partial [Bos mutus]	[more]

BLAST of Chy11G198640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07660.1	1.7e-16	95.56	Histone superfamily protein	[more]
AT1G07820.1	1.7e-16	95.56	Histone superfamily protein	[more]
AT1G07820.2	1.7e-16	95.56	Histone superfamily protein	[more]
AT2G28740.1	1.7e-16	95.56	histone H4	[more]
AT3G45930.1	1.7e-16	95.56	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 5..16 score: 95.59 coord: 20..39 score: 93.38
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..54 e-value: 3.7E-19 score: 70.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..45
None	No IPR available	PANTHER	PTHR10484:SF186	HISTONE H4	coord: 1..45
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 15..19

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G198640.1	Chy11G198640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity