Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGATCATCATCACAGGAAGAACATCATCAAGTTCCTAACTCTTGTTTTCTACCTTTCATCCATTATCTCTTGATCAAACTTACATTCTTTCAAAACGCCAAAATTAATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTAACTTGTTTTCTTTTCTTCTCCATTCTCAGCGGTGGCGGTTGTCTTTTGATGTACATGATCCTCCCTGAAACCGAAACCACCGCCTGGCTACCTATCACCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTATTAACTTTCTTCTATAGAGTTCTCTCACGTGCATGTGGTTTTAGAGTCTCCCTTGGTATTGGGGCGGATGTAGGTGCCAATAATGCAAATGCCAATAATAACAATAACAATAATGCATCATCTGCTGAATCCGCTCAGCAGGATGTGGGAGAACAAGGTAATGAGGACAACAACAATGCTGATCAAAGACAAAGCAATTCGTCGTCCAACAACTCAATAGTATCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGCGTCGTAA
mRNA sequence
ATGGAAGATGATCATCATCACAGGAAGAACATCATCAACGGTGGCGGTTGTCTTTTGATGTACATGATCCTCCCTGAAACCGAAACCACCGCCTGGCTACCTATCACCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTATTAACTTTCTTCTATAGAGTTCTCTCACGTGCATGTGGTTTTAGAGTCTCCCTTGGTATTGGGGCGGATGTAGGTGCCAATAATGCAAATGCCAATAATAACAATAACAATAATGCATCATCTGCTGAATCCGCTCAGCAGGATGTGGGAGAACAAGGTAATGAGGACAACAACAATGCTGATCAAAGACAAAGCAATTCGTCGTCCAACAACTCAATAGTATCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGCGTCGTAA
Coding sequence (CDS)
ATGGAAGATGATCATCATCACAGGAAGAACATCATCAACGGTGGCGGTTGTCTTTTGATGTACATGATCCTCCCTGAAACCGAAACCACCGCCTGGCTACCTATCACCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTATTAACTTTCTTCTATAGAGTTCTCTCACGTGCATGTGGTTTTAGAGTCTCCCTTGGTATTGGGGCGGATGTAGGTGCCAATAATGCAAATGCCAATAATAACAATAACAATAATGCATCATCTGCTGAATCCGCTCAGCAGGATGTGGGAGAACAAGGTAATGAGGACAACAACAATGCTGATCAAAGACAAAGCAATTCGTCGTCCAACAACTCAATAGTATCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGCGTCGTAA
Protein sequence
MEDDHHHRKNIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGIGADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEMPLAITMAS*
Homology
BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match:
A0A0A0LJX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336080 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 5.3e-56
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+I++GGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI
Sbjct: 23 SILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 82
Query: 70 GADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEM 129
GADV +NNANANNNNNNNASSAESAQQDVGE+ NEDNNNADQR SNSSSNNSIVSRESEM
Sbjct: 83 GADVSSNNANANNNNNNNASSAESAQQDVGERDNEDNNNADQRHSNSSSNNSIVSRESEM 142
Query: 130 PLAITMAS 138
PLAITMAS
Sbjct: 143 PLAITMAS 150
BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match:
A0A5A7TCV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00470 PE=4 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG
Sbjct: 23 SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82
Query: 70 GADVGANNAN-ANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
GADVG NN N NNNNNNNASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83 GADVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142
Query: 130 MPLAITMAS 138
MPLAITMAS
Sbjct: 143 MPLAITMAS 151
BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match:
A0A1S3CDW9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103499619 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG
Sbjct: 23 SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82
Query: 70 GADVGANNAN-ANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
G DVG NN N NNNNNNNASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83 GEDVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142
Query: 130 MPLAITMAS 138
MPLAITMAS
Sbjct: 143 MPLAITMAS 151
BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match:
A0A6J1EV39 (uncharacterized protein LOC111438319 OS=Cucurbita moschata OX=3662 GN=LOC111438319 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 7.9e-36
Identity = 86/127 (67.72%), Postives = 103/127 (81.10%), Query Frame = 0
Query: 11 IINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGIG 70
I++GG CLL+Y+ILPETE+TAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSL +
Sbjct: 24 ILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA 83
Query: 71 ADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEMP 130
AN+ N ++NNNNN SS ES + D Q ED NN DQR+SN SSNNSI+SRESE+P
Sbjct: 84 --TSANDTNDDDNNNNNNSSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIP 143
Query: 131 LAITMAS 138
AI+M S
Sbjct: 144 FAISMGS 148
BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match:
A0A6J1G7P7 (uncharacterized protein LOC111451588 OS=Cucurbita moschata OX=3662 GN=LOC111451588 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 85/131 (64.89%), Postives = 100/131 (76.34%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLG- 69
++++GGGCLLMY+ LPETE TAWLP+ GLSLVCLPWFFW LTF YR++SRACGFRVSLG
Sbjct: 23 SVLSGGGCLLMYITLPETENTAWLPVAGLSLVCLPWFFWFLTFLYRIISRACGFRVSLGL 82
Query: 70 -IGADVGA-NNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRE 129
+ D A NN NA+NN +N ES Q D G Q N+++ N QRQSNSSSN+S SRE
Sbjct: 83 VVNEDAAATNNENADNNTHN-----ESPQSDAGCQANKEDGN--QRQSNSSSNSSGASRE 142
Query: 130 SEMPLAITMAS 138
SE PLAITM S
Sbjct: 143 SEKPLAITMGS 146
BLAST of Chy11G186130 vs. NCBI nr
Match:
XP_011649431.1 (putative uncharacterized protein DDB_G0284715 [Cucumis sativus])
HSP 1 Score: 226 bits (576), Expect = 1.49e-73
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+I++GGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI
Sbjct: 23 SILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 82
Query: 70 GADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEM 129
GADV +NNANANNNNNNNASSAESAQQDVGE+ NEDNNNADQR SNSSSNNSIVSRESEM
Sbjct: 83 GADVSSNNANANNNNNNNASSAESAQQDVGERDNEDNNNADQRHSNSSSNNSIVSRESEM 142
Query: 130 PLAITMAS 137
PLAITMAS
Sbjct: 143 PLAITMAS 150
BLAST of Chy11G186130 vs. NCBI nr
Match:
KAA0040748.1 (hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa] >TYK02064.1 hypothetical protein E5676_scaffold680G00470 [Cucumis melo var. makuwa])
HSP 1 Score: 209 bits (533), Expect = 5.47e-67
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG
Sbjct: 23 SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82
Query: 70 GADVGANNANANNNNNNN-ASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
GADVG NN N NNNNNNN ASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83 GADVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142
Query: 130 MPLAITMAS 137
MPLAITMAS
Sbjct: 143 MPLAITMAS 151
BLAST of Chy11G186130 vs. NCBI nr
Match:
XP_008460874.1 (PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo])
HSP 1 Score: 207 bits (528), Expect = 3.16e-66
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG
Sbjct: 23 SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82
Query: 70 GADVGANNANANNNNNNN-ASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
G DVG NN N NNNNNNN ASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83 GEDVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142
Query: 130 MPLAITMAS 137
MPLAITMAS
Sbjct: 143 MPLAITMAS 151
BLAST of Chy11G186130 vs. NCBI nr
Match:
XP_038900833.1 (uncharacterized protein LOC120087896 [Benincasa hispida])
HSP 1 Score: 195 bits (496), Expect = 2.36e-61
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+II+GGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVS+GI
Sbjct: 23 SIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSIGI 82
Query: 70 GADVGANNANANNNNNNNASSAESAQQDVGEQ-GNEDNNNADQRQSNSSSNNSIVSRESE 129
G DVGA+NANANNNNNNN +SAES + D G++ ED++N DQR+SNSSSNNSI SRESE
Sbjct: 83 GVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDDDNGDQRRSNSSSNNSIASRESE 142
Query: 130 MPLAITMAS 137
MPLAITM S
Sbjct: 143 MPLAITMGS 151
BLAST of Chy11G186130 vs. NCBI nr
Match:
KAE8651991.1 (hypothetical protein Csa_016945 [Cucumis sativus])
HSP 1 Score: 178 bits (451), Expect = 7.49e-55
Identity = 98/128 (76.56%), Postives = 102/128 (79.69%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+I++GGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI
Sbjct: 23 SILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 82
Query: 70 GADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEM 129
GAD DVGE+ NEDNNNADQR SNSSSNNSIVSRESEM
Sbjct: 83 GAD------------------------DVGERDNEDNNNADQRHSNSSSNNSIVSRESEM 126
Query: 130 PLAITMAS 137
PLAITMAS
Sbjct: 143 PLAITMAS 126
BLAST of Chy11G186130 vs. TAIR 10
Match:
AT4G30770.1 (Putative membrane lipoprotein )
HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 0
Query: 10 NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
+I GGGCL+ Y ILP WL G+ VCLPWFFW+LTF YR++SR GFR+ +G
Sbjct: 23 SIAVGGGCLIAYTILP--YPPVWLSYLGIVFVCLPWFFWILTFAYRIVSRTFGFRMVVG- 82
Query: 70 GADVGANNANANNNNNNN-----ASSAESAQQDVGE-----QGN---EDNNNADQRQSNS 129
G NN NAN S ES D E QG N +++ ++
Sbjct: 83 ---SGGNNNNANGETMTRDLDPPEQSLESPDDDDPEPIAHPQGQVLVSIEGNQSKKRMST 142
Query: 130 SSNNSIVSRESEMPLAITMAS 138
SSN++I S ESEMPLAI+MAS
Sbjct: 143 SSNSTIASHESEMPLAISMAS 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LJX6 | 5.3e-56 | 93.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336080 PE=4 SV=1 | [more] |
A0A5A7TCV0 | 5.1e-51 | 86.82 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CDW9 | 1.9e-50 | 86.05 | Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103499619 PE=4 SV=1 | [more] |
A0A6J1EV39 | 7.9e-36 | 67.72 | uncharacterized protein LOC111438319 OS=Cucurbita moschata OX=3662 GN=LOC1114383... | [more] |
A0A6J1G7P7 | 5.3e-32 | 64.89 | uncharacterized protein LOC111451588 OS=Cucurbita moschata OX=3662 GN=LOC1114515... | [more] |
Match Name | E-value | Identity | Description | |
XP_011649431.1 | 1.49e-73 | 93.75 | putative uncharacterized protein DDB_G0284715 [Cucumis sativus] | [more] |
KAA0040748.1 | 5.47e-67 | 86.82 | hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa] >TYK0206... | [more] |
XP_008460874.1 | 3.16e-66 | 86.05 | PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo] | [more] |
XP_038900833.1 | 2.36e-61 | 80.62 | uncharacterized protein LOC120087896 [Benincasa hispida] | [more] |
KAE8651991.1 | 7.49e-55 | 76.56 | hypothetical protein Csa_016945 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT4G30770.1 | 1.5e-15 | 43.97 | Putative membrane lipoprotein | [more] |