Chy11G186130 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G186130
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 400685 .. 401251 (+)
RNA-Seq Expression	Chy11G186130
Synteny	Chy11G186130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGATCATCATCACAGGAAGAACATCATCAAGTTCCTAACTCTTGTTTTCTACCTTTCATCCATTATCTCTTGATCAAACTTACATTCTTTCAAAACGCCAAAATTAATGTCTTTGGTGAATCCCTCAGCTGGACGTGCATTCATATGGATCGTAACTTGTTTTCTTTTCTTCTCCATTCTCAGCGGTGGCGGTTGTCTTTTGATGTACATGATCCTCCCTGAAACCGAAACCACCGCCTGGCTACCTATCACCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTATTAACTTTCTTCTATAGAGTTCTCTCACGTGCATGTGGTTTTAGAGTCTCCCTTGGTATTGGGGCGGATGTAGGTGCCAATAATGCAAATGCCAATAATAACAATAACAATAATGCATCATCTGCTGAATCCGCTCAGCAGGATGTGGGAGAACAAGGTAATGAGGACAACAACAATGCTGATCAAAGACAAAGCAATTCGTCGTCCAACAACTCAATAGTATCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGCGTCGTAA

mRNA sequence

ATGGAAGATGATCATCATCACAGGAAGAACATCATCAACGGTGGCGGTTGTCTTTTGATGTACATGATCCTCCCTGAAACCGAAACCACCGCCTGGCTACCTATCACCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTATTAACTTTCTTCTATAGAGTTCTCTCACGTGCATGTGGTTTTAGAGTCTCCCTTGGTATTGGGGCGGATGTAGGTGCCAATAATGCAAATGCCAATAATAACAATAACAATAATGCATCATCTGCTGAATCCGCTCAGCAGGATGTGGGAGAACAAGGTAATGAGGACAACAACAATGCTGATCAAAGACAAAGCAATTCGTCGTCCAACAACTCAATAGTATCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGCGTCGTAA

Coding sequence (CDS)

ATGGAAGATGATCATCATCACAGGAAGAACATCATCAACGGTGGCGGTTGTCTTTTGATGTACATGATCCTCCCTGAAACCGAAACCACCGCCTGGCTACCTATCACCGGTTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGCTATTAACTTTCTTCTATAGAGTTCTCTCACGTGCATGTGGTTTTAGAGTCTCCCTTGGTATTGGGGCGGATGTAGGTGCCAATAATGCAAATGCCAATAATAACAATAACAATAATGCATCATCTGCTGAATCCGCTCAGCAGGATGTGGGAGAACAAGGTAATGAGGACAACAACAATGCTGATCAAAGACAAAGCAATTCGTCGTCCAACAACTCAATAGTATCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGCGTCGTAA

Protein sequence

MEDDHHHRKNIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGIGADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEMPLAITMAS*

Homology

[Close]

BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match: A0A0A0LJX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336080 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.3e-56
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +I++GGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI
Sbjct: 23  SILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 82

Query: 70  GADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEM 129
           GADV +NNANANNNNNNNASSAESAQQDVGE+ NEDNNNADQR SNSSSNNSIVSRESEM
Sbjct: 83  GADVSSNNANANNNNNNNASSAESAQQDVGERDNEDNNNADQRHSNSSSNNSIVSRESEM 142

Query: 130 PLAITMAS 138
           PLAITMAS
Sbjct: 143 PLAITMAS 150

[Close]

BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match: A0A5A7TCV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00470 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG 
Sbjct: 23  SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82

Query: 70  GADVGANNAN-ANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
           GADVG NN N  NNNNNNNASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83  GADVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142

Query: 130 MPLAITMAS 138
           MPLAITMAS
Sbjct: 143 MPLAITMAS 151

[Close]

BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match: A0A1S3CDW9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103499619 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG 
Sbjct: 23  SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82

Query: 70  GADVGANNAN-ANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
           G DVG NN N  NNNNNNNASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83  GEDVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142

Query: 130 MPLAITMAS 138
           MPLAITMAS
Sbjct: 143 MPLAITMAS 151

[Close]

BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match: A0A6J1EV39 (uncharacterized protein LOC111438319 OS=Cucurbita moschata OX=3662 GN=LOC111438319 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.9e-36
Identity = 86/127 (67.72%), Postives = 103/127 (81.10%), Query Frame = 0


Query: 11  IINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGIG 70
           I++GG CLL+Y+ILPETE+TAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSL + 
Sbjct: 24  ILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA 83

Query: 71  ADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEMP 130
               AN+ N ++NNNNN SS ES + D   Q  ED NN DQR+SN SSNNSI+SRESE+P
Sbjct: 84  --TSANDTNDDDNNNNNNSSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIP 143

Query: 131 LAITMAS 138
            AI+M S
Sbjct: 144 FAISMGS 148

[Close]

BLAST of Chy11G186130 vs. ExPASy TrEMBL
Match: A0A6J1G7P7 (uncharacterized protein LOC111451588 OS=Cucurbita moschata OX=3662 GN=LOC111451588 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 85/131 (64.89%), Postives = 100/131 (76.34%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLG- 69
           ++++GGGCLLMY+ LPETE TAWLP+ GLSLVCLPWFFW LTF YR++SRACGFRVSLG 
Sbjct: 23  SVLSGGGCLLMYITLPETENTAWLPVAGLSLVCLPWFFWFLTFLYRIISRACGFRVSLGL 82

Query: 70  -IGADVGA-NNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRE 129
            +  D  A NN NA+NN +N     ES Q D G Q N+++ N  QRQSNSSSN+S  SRE
Sbjct: 83  VVNEDAAATNNENADNNTHN-----ESPQSDAGCQANKEDGN--QRQSNSSSNSSGASRE 142

Query: 130 SEMPLAITMAS 138
           SE PLAITM S
Sbjct: 143 SEKPLAITMGS 146

[Close]

BLAST of Chy11G186130 vs. NCBI nr
Match: XP_011649431.1 (putative uncharacterized protein DDB_G0284715 [Cucumis sativus])

HSP 1 Score: 226 bits (576), Expect = 1.49e-73
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +I++GGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI
Sbjct: 23  SILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 82

Query: 70  GADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEM 129
           GADV +NNANANNNNNNNASSAESAQQDVGE+ NEDNNNADQR SNSSSNNSIVSRESEM
Sbjct: 83  GADVSSNNANANNNNNNNASSAESAQQDVGERDNEDNNNADQRHSNSSSNNSIVSRESEM 142

Query: 130 PLAITMAS 137
           PLAITMAS
Sbjct: 143 PLAITMAS 150

[Close]

BLAST of Chy11G186130 vs. NCBI nr
Match: KAA0040748.1 (hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa] >TYK02064.1 hypothetical protein E5676_scaffold680G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 5.47e-67
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG 
Sbjct: 23  SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82

Query: 70  GADVGANNANANNNNNNN-ASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
           GADVG NN N NNNNNNN ASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83  GADVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142

Query: 130 MPLAITMAS 137
           MPLAITMAS
Sbjct: 143 MPLAITMAS 151

[Close]

BLAST of Chy11G186130 vs. NCBI nr
Match: XP_008460874.1 (PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo])

HSP 1 Score: 207 bits (528), Expect = 3.16e-66
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +II+GGGCLLMYMILPE+E+T WLPITGLSLVCLPWFFWLLTFFYRV+SRACG+RVSLG 
Sbjct: 23  SIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFFWLLTFFYRVISRACGYRVSLGT 82

Query: 70  GADVGANNANANNNNNNN-ASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESE 129
           G DVG NN N NNNNNNN ASSAES +QDVGE+GNEDNNN DQR+SNSSSNNSIVSRESE
Sbjct: 83  GEDVGTNNVNDNNNNNNNNASSAESPRQDVGERGNEDNNNVDQRKSNSSSNNSIVSRESE 142

Query: 130 MPLAITMAS 137
           MPLAITMAS
Sbjct: 143 MPLAITMAS 151

[Close]

BLAST of Chy11G186130 vs. NCBI nr
Match: XP_038900833.1 (uncharacterized protein LOC120087896 [Benincasa hispida])

HSP 1 Score: 195 bits (496), Expect = 2.36e-61
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +II+GGGCLLMYMILPETETTAWLP+ GLSLVCLPWFFWLLTFFYRV+SRACGFRVS+GI
Sbjct: 23  SIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSIGI 82

Query: 70  GADVGANNANANNNNNNNASSAESAQQDVGEQ-GNEDNNNADQRQSNSSSNNSIVSRESE 129
           G DVGA+NANANNNNNNN +SAES + D G++   ED++N DQR+SNSSSNNSI SRESE
Sbjct: 83  GVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDDDNGDQRRSNSSSNNSIASRESE 142

Query: 130 MPLAITMAS 137
           MPLAITM S
Sbjct: 143 MPLAITMGS 151

[Close]

BLAST of Chy11G186130 vs. NCBI nr
Match: KAE8651991.1 (hypothetical protein Csa_016945 [Cucumis sativus])

HSP 1 Score: 178 bits (451), Expect = 7.49e-55
Identity = 98/128 (76.56%), Postives = 102/128 (79.69%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +I++GGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI
Sbjct: 23  SILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 82

Query: 70  GADVGANNANANNNNNNNASSAESAQQDVGEQGNEDNNNADQRQSNSSSNNSIVSRESEM 129
           GAD                        DVGE+ NEDNNNADQR SNSSSNNSIVSRESEM
Sbjct: 83  GAD------------------------DVGERDNEDNNNADQRHSNSSSNNSIVSRESEM 126

Query: 130 PLAITMAS 137
           PLAITMAS
Sbjct: 143 PLAITMAS 126

[Close]

BLAST of Chy11G186130 vs. TAIR 10
Match: AT4G30770.1 (Putative membrane lipoprotein )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 0


Query: 10  NIINGGGCLLMYMILPETETTAWLPITGLSLVCLPWFFWLLTFFYRVLSRACGFRVSLGI 69
           +I  GGGCL+ Y ILP      WL   G+  VCLPWFFW+LTF YR++SR  GFR+ +G 
Sbjct: 23  SIAVGGGCLIAYTILP--YPPVWLSYLGIVFVCLPWFFWILTFAYRIVSRTFGFRMVVG- 82

Query: 70  GADVGANNANANNNNNNN-----ASSAESAQQDVGE-----QGN---EDNNNADQRQSNS 129
               G NN NAN             S ES   D  E     QG        N  +++ ++
Sbjct: 83  ---SGGNNNNANGETMTRDLDPPEQSLESPDDDDPEPIAHPQGQVLVSIEGNQSKKRMST 142

Query: 130 SSNNSIVSRESEMPLAITMAS 138
           SSN++I S ESEMPLAI+MAS
Sbjct: 143 SSNSTIASHESEMPLAISMAS 157

The following BLAST results are available for this feature:

BLAST of Chy11G186130 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G186130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJX6	5.3e-56	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336080 PE=4 SV=1	[more]
A0A5A7TCV0	5.1e-51	86.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CDW9	1.9e-50	86.05	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103499619 PE=4 SV=1	[more]
A0A6J1EV39	7.9e-36	67.72	uncharacterized protein LOC111438319 OS=Cucurbita moschata OX=3662 GN=LOC1114383...	[more]
A0A6J1G7P7	5.3e-32	64.89	uncharacterized protein LOC111451588 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]

BLAST of Chy11G186130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649431.1	1.49e-73	93.75	putative uncharacterized protein DDB_G0284715 [Cucumis sativus]	[more]
KAA0040748.1	5.47e-67	86.82	hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa] >TYK0206...	[more]
XP_008460874.1	3.16e-66	86.05	PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]	[more]
XP_038900833.1	2.36e-61	80.62	uncharacterized protein LOC120087896 [Benincasa hispida]	[more]
KAE8651991.1	7.49e-55	76.56	hypothetical protein Csa_016945 [Cucumis sativus]	[more]

BLAST of Chy11G186130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30770.1	1.5e-15	43.97	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..127
None	No IPR available	PANTHER	PTHR34964	MEMBRANE LIPOPROTEIN-RELATED	coord: 11..137
None	No IPR available	PANTHER	PTHR34964:SF3	MEMBRANE LIPOPROTEIN-RELATED	coord: 11..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G186130.1	Chy11G186130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane