Chy10G184530 (gene) Cucumber (hystrix) v1

Overview
NameChy10G184530
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDNA-directed RNA polymerase I subunit like
LocationchrH10: 17134069 .. 17139519 (+)
RNA-Seq ExpressionChy10G184530
SyntenyChy10G184530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTATTTGAATTATCTCATCTCCTAGTTGAGGTATGATTGAATTGGTTGTAGGTTGTTAAAGATGATTTAATGTTAGAGAAATTATTTGAATGACGATTAAATTGTTGTAAATATCTATAAACATAGTAATATATGATCAGTAGTCTTTATCTTTTTATATTCGAATAAAAATAAAATCATATAATAGTCTATAATATACTTTTTTTTTATATATATACTAATTAATAGTTTAGTCTATTTTGATAAAAATAAACCCCTAATACCATGACAATAGTGTTATTTATAATATATATATTAACGAAAGTATAAGAAAAACAATTCTATTCACAGTAACTTCAAAATGATATTAGATTGTTTAATAAAAACTTACGTTTGGCAAGCAATCTAAACAAAAATGAAATAAGATTTTATAACTTTTTGTTCTAAAATTTCAAATTATTCAAGAGACTGATAGGATGAAAATATTTATTTTTTAGAAAATCCAAAATTTTGTAATTTAGTATTTAAAGAAAATGGTCATTTAGCTAAACTGATGTCATGCTTCATCATCCCGATCTATCGTCACATTTACCTGGCGTGTATCGGGCTATTTAATAATAAAATTTATGCCCAGCCCATCATATTAATTATTTTCCTAATCAAATTGTATCTATAAATATACCGTTTGTTTTTTATTTTATTATTTATTTACTTTTTTTAAGGACTACACCTTTTTATTTACTCACGTGGTTAAAGTTATATATTAATATGCACGTTAAATAAATAATTTAGAGCATATTATTTACTTTAAGAAGTTCGACTCATCTTTTTAATTTTTTTTTAAAAAAATTCATGAACTTCTTCAGTGAACAGAAACACTGAACCTCTTTACATTACCGAATACGAATTCCTCTGAAAAGGATCAAACTCATCAATTAGTCTACTCTTGAAAGAAAAAAGATAAAACTGTATGAACAATCTATACTCAAAGATAGTGAGCTTTCGGCCCCCAAAACTGTTTATATTTGAATTCGGCTCCAGGTTTTTCTGTTCTTACCCTTTACTTATGGAATACCATAAATATAACAATAAATATTAAATTTATCGTCTTTAGAATGAAAAATTGTGTAAATTATAGTTATTATCGCTGAAGTTTGTTATAAATCCATATAAAACCTATCCTTTGCTAAACTTCTCAACCCAGATTTTACCTACCAATATATCTATATATAGGGTTCAGAATAGTTTTAATAATAAATTATAAGATATATTATTTGATCGTGTGTGTGTGTGTTGGGCTTGAGATTGTAAAGGAATAGACTGGATTCAATTAATAGGCACTATTACAAATTTCCTTTTAACGTCAGTGTCACCTTTACTTCCAGGGGCGTAGAAAAATGGACTAGCCTAAAATAATACAATCATAATTGTGTAGGCATATTATATCACTTGTTTTTTTTTTTTTTTTTTAATTATGAAATAAATCATTTTTAGCATCACAACAACGTGTAAAATATTCCATTTTTCGTTTTCTTAAAATCTAAAAAGATTATTAAAAAATTGAGATATATAAACATACACACGAATAAATTATCTTTATATTTAGTAATTATACTCTTAAATTTTCAATTTTTTAAATGCTATTAAATTAGTAGACACATGGACACGAACATTAACATCCTCCTAATATAAATTCTACTGCTTTTAACAAATTTAAATTTACTCACTCAAAGTTAAATAATTGTTCAAAATTTGCAGTATGATTAAAAAAAAAAACTATATAAAATATCCATTAAAACTAAATTTAATATTTGTTAAAAGTATACCTAAACTCTAAAATTTAGCAACGGAAAGTATATAAATTATGTAATTTGAAACAAACATCAAAATATAACACCGATGTTTAATTATGTTTTATTTAGTTTGTATATAGAAGTAATTTTTAAAAAAAATTAACCAATATTTTTGCTCACGTCAAATAAAATTAGATAAAAGGAAAAAGAAACTAGATTTTGTTATCTAAGCTCCTATAGCTACTTAGAACACATATTGCAAAAATGGAAACTGAGAAACGTGAAAACTGTATATTAATAAATAAGAAAATTTTCTTTTGTAGTTTGTTTTTAATTATAATTAAACTAGAAACAGCAGAGATTAATAAATAATTTTTCGAAAGAAGAAAATTAAAAAAATGATGTTACACATTAAACCTGCATGCACTGTATAGTATGTAATCATGCACAGTGGATATTATTTTATTGGTACCGTGTGGAAGTAAGGATTGCATATTACGAGAAAGGGCACACGGCACAGTGGATAATTTCTGTCGCTATCGGCAACTGGCGTTACCGGGATCCGTTTCTTTCCTCGTCACGTAAAAACAATTCAGTTGCACTCTCTATCTGTCAGCCTGATGACTTACCCCACACGTTGCCCGTGACTGACTACCTGCCACGTCATCCTCTCGTTTATCTCACTTTCAACTTAAATCATTATTTTAATCTCGACAATTTTTTGTTAAATCATTTATACGACACGTGACAGTAAATAAAGAAGGTGTCGGTAAATTATATCCATTAACATTGTGCAGGTAAGAATGGTACGAGTCAGATATCACAGAAATTACATAATTATACTTTTAAACTTTTAATAAAAATAATTCGATTCTTATTTTTTAAAAAGTTTATAATTCAAACAGCAAATTTACTATAATTGTAAACTCGAACCAACGAATAATAAAAATTCAATCATCAAATTTGTTTAGGTTGGATTTTAAATTTTGATCAAGTTTAGTTTTAACTTTGGAGTTAAATTTGAATTATGATTACACACTGTTTGAAAATATATACATTTTTCTCCTCCACTATTAAATTTGTTGCCACCTTTTCTCGTTGAAATAAAATATGGGAGTTGACATGACTGGTAATAAGTAAATAGAAGATATAATGTGTGTCTTTCAAATTAATGAGGTAAACTTTTTTTTCAGTAAATTTAGGAGTTTTACAACAATACTATACACGAGTCAAATTGAAAACCTGCCCCAGATTTGTAAATAATTAGGACAATTTAACAAAAACAAATAATCAAACTACATTTTGAGTAAATTGTAGTGTATTATCGTGAAAAGTTTGTACTTTAATATGAATATATATTTTATAAGGACTACTTAATATTCTTTTTAATTACTACATTTTGTTTTCCTTTTTGATCTTTTAGTAATGTTTCAAAGCCTTACAATTTAGGAGTGGAACAAAGCAAGTGTTTGGGAACTATTAATAGATTGTATTGTTGTTTAAACTATAAGCAACCACGGAAGTAAATAAAAACATATTCAAATCCGCAAATAAAAAAATATAAACTTTTTACAAATAATATATATATCCACGTCAAAGACTTTGGAAGAAGACCAAAAATTTGATCAATCGATATATTAGCTAAAAGAAGCAAAAAAATTTCTCACTTTAAATTGATTTAGTATCTTTTTCTCTTTAGCTTTAAGGAAATGAAAAAAAATTAAAAACAAAATAAAGAAAGAGAGAGAGAAATAAAATGAAAGGATTTTGTCGGGGAGGGGGGAGAGGTGGGTTTTGTCTTTGCCTAAAAGGGAATGTGGCGCCCTATTCTCTCCAACACAGCTGTACATCACAGCCACTGTACAGGGAAAATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGATAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCGCTTCGCTTTTTTTCTTTTCTTTTCGTGTCATCATTTGATAATCTCCCCCTCCTTCGTTGGTAATTATTTATTATTGATGTAAAAAAATAATTTAAAAGAAAAACAAAAGTTTTTTTTTTCTTTTTTTATAAAATTACAAGGTTAAGTAAGATATCAGAGGCAAGTTTAATCTCAATTTCGTAGTTATTGTATATGTTTATATATATAGAAAATAGTTTAAATTGTTTATATTGCGGAAAGTATGCAGGTACTAAAATCAAACATTTCAATGTACATATACTAAAATTATGAACAGATTAAACTCCAGATAATAATGATCAAGAAGGTATTAATTAGAACCAATAATACATTTAGTCATTTCGGACTACGGGTCATCGTGCCATAATATTGTTTATTTAAATTAAACATCTGGACTTTATTTTTTGAATCGAAATGAAAATAATTGTTCTCACCTATTATATAGAACATAAGTTTTTTATTGAATTTATTTCACTGTTCTTGGTTATATTTAGCACAACTCTCAAAGGAGTTAGAATGTAAATACTTTATGATTGAAAACTACGAAGGCAAGAAAATTTCTTTTTCATACTGATGATTTAAACAATTTTCGAGCAAGTTGCAACTATTTCAATTGATTTATCTTACTTACATGATAAAAGCATGCAATCTTAGACAAACGAAATACAATTCACTTTGATTTATATAATACCTGGAAGGGGGATACAAAACTCAAGTAAAATTATCGGCTTTAGCATAGCTAATCGGTTGAGACGTAAGATCTAGAGAATTGTGTGATGTATTGTTATTTTATATGTACATACCATGTATGTTCACGAACCCACCTTGTATCCTCTTATGCTTAGTTTGAATGTTCGCAATCTTAAGAGGGCTTGCACTTCTATTGTGAAATCGAACCGCTCTCATCGAGATATTTTTTTATTGAGTTATGTGTACATGAATCCAATCGAAAAAAATTAAAAGTATATAAATCAAAATTAAATGAGATGAGAGGTATATATATATATATAAACAGAATTAGCATTGAAATTGCTCTAAATAAAAAATAAAAATATCGCCCGGCGCTACAACACATTCACCACTAAGTTCCTACCCTCCCCATCTCTTCCTGTCTTGTATCCATCGGCCGAAAACCATGTGTGCTGCGAACCGCTATAGATTTCGGGAACGTTTCGGACAAAATTGAACCAAAAATCAATACAACAATGTTAGGGTTTCTCACAATCCCACACCAATTGAAGATTTCCCCACCTCTCTCTTCAATCTCATCACCTTCTTCCCTCTACAAATTCCCTCTCCATCACACATTTTACAACTCCCAATTTCTAATTTCCAGAAACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACCGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAAGAGTTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTCTACTTTAG

mRNA sequence

ATGTGTTTATTTGAATTATCTCATCTCCTAGTTGAGGATTGCATATTACGAGAAAGGGCACACGGCACAGTGGATAATTTCTGTCGCTATCGGCAACTGGCGTTACCGGGATCCGTTTCTTTCCTCGTCACTAATGTTTCAAAGCCTTACAATTTAGGAGTGGAACAAAGCAAAAACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACCGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAAGAGTTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTCTACTTTAG

Coding sequence (CDS)

ATGTGTTTATTTGAATTATCTCATCTCCTAGTTGAGGATTGCATATTACGAGAAAGGGCACACGGCACAGTGGATAATTTCTGTCGCTATCGGCAACTGGCGTTACCGGGATCCGTTTCTTTCCTCGTCACTAATGTTTCAAAGCCTTACAATTTAGGAGTGGAACAAAGCAAAAACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACCGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAAGAGTTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTCTACTTTAG

Protein sequence

MCLFELSHLLVEDCILRERAHGTVDNFCRYRQLALPGSVSFLVTNVSKPYNLGVEQSKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL*
Homology
[Close]
BLAST of Chy10G184530 vs. ExPASy TrEMBL
Match: A0A0A0KRG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.8e-49
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0 

Query: 50  YNLGVEQSKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIK 109
           YN     S +HRRFTAFASNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIK
Sbjct: 40  YNSQFLISSDHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIK 99

Query: 110 WAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILIT 169
           WAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILIT
Sbjct: 100 WAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILIT 159

Query: 170 LL 172
           LL
Sbjct: 160 LL 161

[Close]
BLAST of Chy10G184530 vs. ExPASy TrEMBL
Match: A0A5D3CD16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002130 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.9e-48
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 57  SKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 116
           S N RRFTA ASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID
Sbjct: 50  SSNRRRFTASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 109

Query: 117 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 172
           PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 110 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]
BLAST of Chy10G184530 vs. ExPASy TrEMBL
Match: A0A1S3BFX0 (uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.9e-48
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 57  SKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 116
           S N RRFTA ASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID
Sbjct: 72  SSNRRRFTASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 131

Query: 117 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 172
           PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 132 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

[Close]
BLAST of Chy10G184530 vs. ExPASy TrEMBL
Match: A0A6J1CF05 (uncharacterized protein LOC111010120 OS=Momordica charantia OX=3673 GN=LOC111010120 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-40
Identity = 99/114 (86.84%), Postives = 104/114 (91.23%), Query Frame = 0 

Query: 58  KNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDP 117
           +N  RFTAF+ N +   GG+IKEREGER GAK  SNGGDDLKKERGPVFNIKWAELLIDP
Sbjct: 56  RNRARFTAFSGNGDNGLGGNIKEREGERTGAK-GSNGGDDLKKERGPVFNIKWAELLIDP 115

Query: 118 DPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 172
           DPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 116 DPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 168

[Close]
BLAST of Chy10G184530 vs. ExPASy TrEMBL
Match: A0A6J1GYA2 (uncharacterized protein LOC111458579 OS=Cucurbita moschata OX=3662 GN=LOC111458579 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 0 

Query: 61  RRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPD 120
           +RFTA ASN +   GG+IKEREGERNGAK  S G DDL+KERGPVFNIKWAELLIDPDPD
Sbjct: 55  KRFTALASNNDNGLGGNIKEREGERNGAK-GSKGDDDLRKERGPVFNIKWAELLIDPDPD 114

Query: 121 NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 172
           NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 115 NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]
BLAST of Chy10G184530 vs. NCBI nr
Match: XP_011655841.1 (uncharacterized protein LOC105435592 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 7.83e-64
Identity = 113/122 (92.62%), Postives = 114/122 (93.44%), Query Frame = 0 

Query: 50  YNLGVEQSKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIK 109
           YN     S +HRRFTAFASNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIK
Sbjct: 40  YNSQFLISSDHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIK 99

Query: 110 WAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILIT 169
           WAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILIT
Sbjct: 100 WAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILIT 159

Query: 170 LL 171
           LL
Sbjct: 160 LL 161

[Close]
BLAST of Chy10G184530 vs. NCBI nr
Match: KAE8648834.1 (hypothetical protein Csa_007844 [Cucumis sativus])

HSP 1 Score: 201 bits (511), Expect = 4.19e-63
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 60  HRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDP 119
           HRRFTAFASNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPDP
Sbjct: 37  HRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDP 96

Query: 120 DNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 171
           DNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
Sbjct: 97  DNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 148

[Close]
BLAST of Chy10G184530 vs. NCBI nr
Match: KAA0034669.1 (uncharacterized protein E6C27_scaffold65G006880 [Cucumis melo var. makuwa] >TYK09220.1 uncharacterized protein E5676_scaffold475G002130 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (511), Expect = 7.06e-63
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 57  SKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 116
           S N RRFTA ASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID
Sbjct: 50  SSNRRRFTASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 109

Query: 117 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 171
           PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 110 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]
BLAST of Chy10G184530 vs. NCBI nr
Match: XP_008446780.1 (PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo])

HSP 1 Score: 201 bits (511), Expect = 1.44e-62
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 57  SKNHRRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 116
           S N RRFTA ASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID
Sbjct: 72  SSNRRRFTASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLID 131

Query: 117 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 171
           PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 132 PDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

[Close]
BLAST of Chy10G184530 vs. NCBI nr
Match: XP_023549272.1 (uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176 bits (447), Expect = 3.75e-53
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 61  RRFTAFASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPD 120
           +RFTA ASN +   GG+IKEREGERNGAK S NGGDDL+KERGPVFNIKWAELLIDPDPD
Sbjct: 55  KRFTALASNNDNGLGGNIKEREGERNGAKGS-NGGDDLRKERGPVFNIKWAELLIDPDPD 114

Query: 121 NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 171
           NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 115 NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 164

[Close]
BLAST of Chy10G184530 vs. TAIR 10
Match: AT4G40045.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-17
Identity = 64/133 (48.12%), Postives = 82/133 (61.65%), Query Frame = 0 

Query: 43  VTNVSKPYNLGVEQSKNHRRFTAFAS---NKNTEFGG-SIKEREGERNGAKSSSNGGDDL 102
           VT +   ++  +    +H R     S     N + G  S KE  G  N   ++ +G    
Sbjct: 10  VTTLKPRFSYNIPHHHHHIRLCKSPSLILRTNAQNGNDSAKESSGGGNRPVTNDDGNGS- 69

Query: 103 KKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSF 162
           KK++   F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AILVAALKYSF
Sbjct: 70  KKDQFAGFSFKWGELL-NPDQDNFVAVGLAGVLTWASLQVLSQLFFISFAILVAALKYSF 129

Query: 163 IAALLLFILITLL 172
           IAALL+FIL+TLL
Sbjct: 130 IAALLIFILVTLL 140

The following BLAST results are available for this feature:
BLAST of Chy10G184530 vs.
Match NameE-valueIdentityDescription
BLAST of Chy10G184530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRG87.8e-4992.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1[more]
A0A5D3CD163.9e-4896.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BFX03.9e-4896.52uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=... [more]
A0A6J1CF051.7e-4086.84uncharacterized protein LOC111010120 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1GYA23.3e-3987.39uncharacterized protein LOC111458579 OS=Cucurbita moschata OX=3662 GN=LOC1114585... [more]
BLAST of Chy10G184530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655841.17.83e-6492.62uncharacterized protein LOC105435592 [Cucumis sativus][more]
KAE8648834.14.19e-6398.21hypothetical protein Csa_007844 [Cucumis sativus][more]
KAA0034669.17.06e-6396.52uncharacterized protein E6C27_scaffold65G006880 [Cucumis melo var. makuwa] >TYK0... [more]
XP_008446780.11.44e-6296.52PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo][more]
XP_023549272.13.75e-5389.19uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo][more]
BLAST of Chy10G184530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G40045.14.6e-1748.12unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..100
NoneNo IPR availablePANTHERPTHR36789TRANSMEMBRANE PROTEINcoord: 55..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G184530.1Chy10G184530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane