CcUC09G180350 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G180350
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionextensin-like isoform X1
LocationCicolChr09: 31543936 .. 31544948 (-)
RNA-Seq ExpressionCcUC09G180350
SyntenyCcUC09G180350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGCTAATGAGGGTTGGTTTTGGGGACATAATTGTACTTTGCCTTTCAAACCTAGGCACAAGTCTCCTCCACCACCATCACGGCGGCTCCCACCCTCACCACCACCATTACGACGTCCTCGAACTCCATCATTACCACGGTTTCCACCGGCACCATCACGACATCCTCGAACTCCACCATCACGACGGTTTCCGCCGTCACCACCACCATCAAGATATCCTCGAACACCACCATCACCACGGTTTTCCCTGCTGCCACCACGACATCCTCAAACACCACCATCACCACGTTTTTCGCCACCACCACCACGGCGTCCTCGAACACCACCATCACAACGGCTGTCGCCGCCGCCACCACCACCACTAGTGCTATCATCGCCTCCACCACCATCAAGAAGGCCTCGAACACCACCACCACAAAAGTCACCACCACTTCCACCACCATCACCGATGGTGTCACCACCACCACCACGATCACGACGGCCACGAACACCACCATCTCAACAAATACCACCACCACCACCGTCATCGCCATTATTGCCGTCACCGTTGCCATCACCATCATTGCCACCATCACCACTACCGACTCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCTAAGCAATGGCAGCTTGGCTTCGATTATAATGATTGGGCACTCAAAAATGGTCCCTTTTATGTAAACGATATTCTAGGTAATCCTCTTTAAGCTCATTTCCATGGTTAGTATGAGAAAATTTCATTCCCAAACTTATTTTGAAAGAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGATCCTCCAAACACTTCAACTCCTCCTCATAGTGTTTATCAGCTACCAAACATGAGAAGCTTTGCCAATTGTGATTTGGGAAAGGGCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGTTTTGAGTTTGTGCTCAAAGACCAAAATCCTTACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAAATTGGATCCATG

mRNA sequence

TCCGCTAATGAGGGTTGGTTTTGGGGACATAATTGTACTTTGCCTTTCAAACCTAGGCACAAGTCTCCTCCACCACCATCACGGCGGCTCCCACCCTCACCACCACCATTACGACGTCCTCGAACTCCATCATTACCACGGTTTCCACCGGCACCATCACGACATCCTCGAACTCCACCATCACGACGGTTTCCGCCGTCACCACCACCATCAAGATATCCTCGAACACCACCATCACCACGGTTTTCCCTGCTGCCACCACGACATCCTCAAACACCACCATCACCACGTTTTTCGCCACCACCACCACGGCGTCCTCGAACACCACCATCACAACGGCTGTCGCCGCCGCCACCACCACCACTAGTGCTATCATCGCCTCCACCACCATCAAGAAGGCCTCGAACACCACCACCACAAAAGTCACCACCACTTCCACCACCATCACCGATGGTGTCACCACCACCACCACGATCACGACGGCCACGAACACCACCATCTCAACAAATACCACCACCACCACCGTCATCGCCATTATTGCCGTCACCGTTGCCATCACCATCATTGCCACCATCACCACTACCGACTCCACAAATGGGTGGTTCTAAGCAATGGCAGCTTGGCTTCGATTATAATGATTGGGCACTCAAAAATGGTCCCTTTTATCTACCAAACATGAGAAGCTTTGCCAATTGTGATTTGGGAAAGGGCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGTTTTGAGTTTGTGCTCAAAGACCAAAATCCTTACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAAATTGGATCCATG

Coding sequence (CDS)

TCCGCTAATGAGGGTTGGTTTTGGGGACATAATTGTACTTTGCCTTTCAAACCTAGGCACAAGTCTCCTCCACCACCATCACGGCGGCTCCCACCCTCACCACCACCATTACGACGTCCTCGAACTCCATCATTACCACGGTTTCCACCGGCACCATCACGACATCCTCGAACTCCACCATCACGACGGTTTCCGCCGTCACCACCACCATCAAGATATCCTCGAACACCACCATCACCACGGTTTTCCCTGCTGCCACCACGACATCCTCAAACACCACCATCACCACGTTTTTCGCCACCACCACCACGGCGTCCTCGAACACCACCATCACAACGGCTGTCGCCGCCGCCACCACCACCACTAGTGCTATCATCGCCTCCACCACCATCAAGAAGGCCTCGAACACCACCACCACAAAAGTCACCACCACTTCCACCACCATCACCGATGGTGTCACCACCACCACCACGATCACGACGGCCACGAACACCACCATCTCAACAAATACCACCACCACCACCGTCATCGCCATTATTGCCGTCACCGTTGCCATCACCATCATTGCCACCATCACCACTACCGACTCCACAAATGGGTGGTTCTAAGCAATGGCAGCTTGGCTTCGATTATAATGATTGGGCACTCAAAAATGGTCCCTTTTATCTACCAAACATGAGAAGCTTTGCCAATTGTGATTTGGGAAAGGGCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGTTTTGAGTTTGTGCTCAAAGACCAAAATCCTTACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAAATTGGATCCATG

Protein sequence

SANEGWFWGHNCTLPFKPRHKSPPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPRFSLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKSPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPPPPSSPLLPSPLPSPSLPPSPLPTPQMGGSKQWQLGFDYNDWALKNGPFYLPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKIGSM
Homology
BLAST of CcUC09G180350 vs. NCBI nr
Match: XP_038902031.1 (extensin-3-like [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-78
Identity = 207/316 (65.51%), Postives = 220/316 (69.62%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKSPPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPP 60
           SAN G F G+N TL     ++SPPPP RR PPSPPP RRP TP   RFPP PS HPRTPP
Sbjct: 22  SANVGRFRGYNSTL-----NRSPPPPLRRFPPSPPPSRRPPTPPSRRFPPPPSHHPRTPP 81

Query: 61  SRRFPPSPPPSRYPRTPPSPRFSLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLSPPPPP 120
           SR+FPP PPPSR PRTPPS                 ++ PPPPR PRTPPS R   P  P
Sbjct: 82  SRQFPP-PPPSRRPRTPPS-----------------QWLPPPPRHPRTPPSPR--HPRTP 141

Query: 121 PLVLSSPPPPSRRPRTPPPQKSPPLP-------PPSPMVSPPPPRSRRPRTPPSQQIPPP 180
           PLVLSSPPPPSRR RTPP Q  PP P       PPSPM+S PPP+SRRPRTPPSQ+IPPP
Sbjct: 142 PLVLSSPPPPSRRCRTPPQQSPPPSPPSQQPQTPPSPMMS-PPPQSRRPRTPPSQKIPPP 201

Query: 181 PPSSPLLPSPLPSPSLP--PSPLPTPQ------MGGSKQWQLGFDYNDWALKNGPFY--- 240
           PPS   +PSP P PSLP  PSPLP PQ      +GGSKQWQLGFDYNDWALKNGPFY   
Sbjct: 202 PPS---VPSPSPLPSLPPSPSPLPIPQSPRKIIVGGSKQWQLGFDYNDWALKNGPFYVND 261

Query: 241 --------------------LPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYY 279
                               LPNMRSFANCDLGKGKMVAN+TQGS DGFEFVLKDQNPYY
Sbjct: 262 ILVFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKGKMVANITQGSRDGFEFVLKDQNPYY 308

BLAST of CcUC09G180350 vs. NCBI nr
Match: XP_011649199.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypothetical protein Csa_006192 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 5.4e-62
Identity = 180/313 (57.51%), Postives = 190/313 (60.70%), Query Frame = 0

Query: 3   NEGWFWGH-NCTLPFKPRHKSPPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPPS 62
           N GWFWG  NCT+   P HK         P  PPPLRR     LP     PSR+PRTPPS
Sbjct: 25  NGGWFWGRPNCTVSSIPCHK---------PSLPPPLRR-----LP-----PSRYPRTPPS 84

Query: 63  RRFPPSPPPSRYPRTPPSPRFSLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLSPPPPPP 122
           RRFP  PPPSR  RTPPS R  LLPP            PPPPR PRT             
Sbjct: 85  RRFP--PPPSRRLRTPPSQRCPLLPP-----------PPPPPRHPRT------------- 144

Query: 123 LVLSSPPPPSRRPRTPPPQKSPPL----PPPSPMVSPPPPRSR---RPRTPPSQQIPPPP 182
                 PPPSRRPRTPPP   PP+    PPPSP+VSPPPP+ R   RPR PP Q IPP P
Sbjct: 145 ------PPPSRRPRTPPP--PPPMLSSPPPPSPIVSPPPPQRRPRPRPRPPPFQPIPPSP 204

Query: 183 PSSPLLPSPLPSPSLPPSPLPTPQ------MGGSKQWQLGFDYNDWALKNGPFY------ 242
           PS P    P PSPSLPPSP PTPQ      +GGS QWQLGFDY DWALKNGPFY      
Sbjct: 205 PSLPSPSPPSPSPSLPPSPQPTPQSPRKIIVGGSNQWQLGFDYTDWALKNGPFYVNDILV 264

Query: 243 -----------------LPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYYFAC 279
                            LPNMRS ANCD GK K++AN+TQGSGDGFEFVLKDQNPYYFAC
Sbjct: 265 FKYDPPNRSTPPHNVYLLPNMRSLANCDFGKAKVLANITQGSGDGFEFVLKDQNPYYFAC 284

BLAST of CcUC09G180350 vs. NCBI nr
Match: XP_023533130.1 (extensin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.8 bits (530), Expect = 6.2e-50
Identity = 166/316 (52.53%), Postives = 189/316 (59.81%), Query Frame = 0

Query: 15  PFKPRHKSPPPPSR--RLPPS---PPPLRRPRTPSLPRFPPAPSRHPRTPPSRRFPPSPP 74
           P   R  SPPPPS   R+PP    PPP +RPR P  PR  P PS+ PR PP R  PP  P
Sbjct: 234 PQSRRLPSPPPPSTRPRIPPPRQVPPPSKRPRIPP-PRHVPPPSKRPRIPPPRHVPPPSP 293

Query: 75  PSRYPRTPPSPRFSLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLSPPPPPP-------- 134
           P      PPS R  + PPR    PPSP   PPP +RPR PP +++ PP PPP        
Sbjct: 294 P------PPSKRPRIPPPRQ-VPPPSP---PPPSKRPRIPPPRQVPPPSPPPPSKRPRIP 353

Query: 135 ----LVLSSPPPPSRRPRTPPPQKSPPLPPPSPMVSP------------PPPRSRRPRTP 194
               +   SPPPPS+RPR PPP++ PP  PP P   P            PPP S++PR P
Sbjct: 354 PPRQVPPPSPPPPSKRPRIPPPRQVPPPSPPPPSKQPRIPPPRQVPPPSPPPPSKQPRIP 413

Query: 195 PSQQIPPPPPSSPLLPSPLPSPSLPPSPLPTPQ------MGGSKQWQLGFDYNDWALKNG 254
           P +Q+PP    SP  PSP PSPS  PSP P PQ      +GGS++W+LGFDYNDWALKNG
Sbjct: 414 PPRQMPP----SPSPPSPSPSPS--PSPSPNPQIPRKIIVGGSERWRLGFDYNDWALKNG 473

Query: 255 PFY-----------------LPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYY 279
           PFY                 LPNM+S  +CD G  KMVANLTQGSGDGFEFVL  QNPYY
Sbjct: 474 PFYLNDILVFKYDRTHSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNHQNPYY 532

BLAST of CcUC09G180350 vs. NCBI nr
Match: XP_023007476.1 (extensin-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-44
Identity = 185/432 (42.82%), Postives = 209/432 (48.38%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKSPP-----------PPSRRLPPSPPPL--RRPRT----P 60
           SA+ GWF   N T  F  RHK PP           PP RRLPPSPPP   R+PRT    P
Sbjct: 22  SADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWRRLPPSPPPSQPRKPRTPPSRP 81

Query: 61  SLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPRFSLLPPRHPQ------------ 120
             PR PP+  R PRTPP RR PPSPPPSR PRTPP P      P++P+            
Sbjct: 82  RQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPPLP-----TPQNPRKIIVGGSKYWRL 141

Query: 121 ------------------------------TPP--------------------------- 180
                                         TPP                           
Sbjct: 142 GFDYNDWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLPNMQSFNKCDFRRAKLVANLT 201

Query: 181 --------------------------------SPRFSPPPPRR---PRTPPSQRLSPPPP 240
                                           S +FS  P  R      PPS+    PPP
Sbjct: 202 QGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQSRRLPSPLPPSRPPRIPPP 261

Query: 241 ---PPLVLSSPPPPSRRPRTPPPQKSPP------LPPPSPMVSP-PPPRSRRPRTPPSQQ 279
              PPL    PPPPS+RPR PPP++ PP      +PPP  +  P PPP S+RPR PP + 
Sbjct: 262 RHVPPLF---PPPPSKRPRIPPPRQVPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRP 321

BLAST of CcUC09G180350 vs. NCBI nr
Match: XP_023007477.1 (extensin-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-44
Identity = 180/412 (43.69%), Postives = 205/412 (49.76%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKSPP-----------PPSRRLPPSPPPL--RRPRT----P 60
           SA+ GWF   N T  F  RHK PP           PP RRLPPSPPP   R+PRT    P
Sbjct: 22  SADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWRRLPPSPPPSQPRKPRTPPSRP 81

Query: 61  SLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPR---------------------- 120
             PR PP+  R PRTPP RR PPSPPPSR PRTPP P                       
Sbjct: 82  RQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPPLPTPQNPRKIIVGGSKYWRLGFDYN 141

Query: 121 ----------------------FSLLPPRHPQTPPSPR-FSPPPPRRPR----------- 180
                                  S  PP +    P+ + F+    RR +           
Sbjct: 142 DWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLPNMQSFNKCDFRRAKLVANLTQGSGN 201

Query: 181 ---------------------------------TPPSQRLSPPPPP--PLVLSSP---PP 240
                                            TP S+RL  P PP  P  +  P   PP
Sbjct: 202 GFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQSRRLPSPLPPSRPPRIPPPRHVPP 261

Query: 241 PSRRPRTPPPQKSPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPP--PPSSPLLPSPLPSP 279
           PS+RPR PPP++   +PPPS     PPP S+RPR PP + +PPP  PPS P  PSP PSP
Sbjct: 262 PSKRPRIPPPRQ---VPPPS-----PPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPSPSP 321

BLAST of CcUC09G180350 vs. ExPASy TrEMBL
Match: A0A0A0LIT9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.6e-62
Identity = 180/313 (57.51%), Postives = 190/313 (60.70%), Query Frame = 0

Query: 3   NEGWFWGH-NCTLPFKPRHKSPPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPPS 62
           N GWFWG  NCT+   P HK         P  PPPLRR     LP     PSR+PRTPPS
Sbjct: 25  NGGWFWGRPNCTVSSIPCHK---------PSLPPPLRR-----LP-----PSRYPRTPPS 84

Query: 63  RRFPPSPPPSRYPRTPPSPRFSLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLSPPPPPP 122
           RRFP  PPPSR  RTPPS R  LLPP            PPPPR PRT             
Sbjct: 85  RRFP--PPPSRRLRTPPSQRCPLLPP-----------PPPPPRHPRT------------- 144

Query: 123 LVLSSPPPPSRRPRTPPPQKSPPL----PPPSPMVSPPPPRSR---RPRTPPSQQIPPPP 182
                 PPPSRRPRTPPP   PP+    PPPSP+VSPPPP+ R   RPR PP Q IPP P
Sbjct: 145 ------PPPSRRPRTPPP--PPPMLSSPPPPSPIVSPPPPQRRPRPRPRPPPFQPIPPSP 204

Query: 183 PSSPLLPSPLPSPSLPPSPLPTPQ------MGGSKQWQLGFDYNDWALKNGPFY------ 242
           PS P    P PSPSLPPSP PTPQ      +GGS QWQLGFDY DWALKNGPFY      
Sbjct: 205 PSLPSPSPPSPSPSLPPSPQPTPQSPRKIIVGGSNQWQLGFDYTDWALKNGPFYVNDILV 264

Query: 243 -----------------LPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYYFAC 279
                            LPNMRS ANCD GK K++AN+TQGSGDGFEFVLKDQNPYYFAC
Sbjct: 265 FKYDPPNRSTPPHNVYLLPNMRSLANCDFGKAKVLANITQGSGDGFEFVLKDQNPYYFAC 284

BLAST of CcUC09G180350 vs. ExPASy TrEMBL
Match: A0A6J1L0M6 (extensin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.5e-45
Identity = 185/432 (42.82%), Postives = 209/432 (48.38%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKSPP-----------PPSRRLPPSPPPL--RRPRT----P 60
           SA+ GWF   N T  F  RHK PP           PP RRLPPSPPP   R+PRT    P
Sbjct: 22  SADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWRRLPPSPPPSQPRKPRTPPSRP 81

Query: 61  SLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPRFSLLPPRHPQ------------ 120
             PR PP+  R PRTPP RR PPSPPPSR PRTPP P      P++P+            
Sbjct: 82  RQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPPLP-----TPQNPRKIIVGGSKYWRL 141

Query: 121 ------------------------------TPP--------------------------- 180
                                         TPP                           
Sbjct: 142 GFDYNDWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLPNMQSFNKCDFRRAKLVANLT 201

Query: 181 --------------------------------SPRFSPPPPRR---PRTPPSQRLSPPPP 240
                                           S +FS  P  R      PPS+    PPP
Sbjct: 202 QGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQSRRLPSPLPPSRPPRIPPP 261

Query: 241 ---PPLVLSSPPPPSRRPRTPPPQKSPP------LPPPSPMVSP-PPPRSRRPRTPPSQQ 279
              PPL    PPPPS+RPR PPP++ PP      +PPP  +  P PPP S+RPR PP + 
Sbjct: 262 RHVPPLF---PPPPSKRPRIPPPRQVPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRP 321

BLAST of CcUC09G180350 vs. ExPASy TrEMBL
Match: A0A6J1KYU0 (extensin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.5e-45
Identity = 180/412 (43.69%), Postives = 205/412 (49.76%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKSPP-----------PPSRRLPPSPPPL--RRPRT----P 60
           SA+ GWF   N T  F  RHK PP           PP RRLPPSPPP   R+PRT    P
Sbjct: 22  SADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWRRLPPSPPPSQPRKPRTPPSRP 81

Query: 61  SLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPR---------------------- 120
             PR PP+  R PRTPP RR PPSPPPSR PRTPP P                       
Sbjct: 82  RQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPPLPTPQNPRKIIVGGSKYWRLGFDYN 141

Query: 121 ----------------------FSLLPPRHPQTPPSPR-FSPPPPRRPR----------- 180
                                  S  PP +    P+ + F+    RR +           
Sbjct: 142 DWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLPNMQSFNKCDFRRAKLVANLTQGSGN 201

Query: 181 ---------------------------------TPPSQRLSPPPPP--PLVLSSP---PP 240
                                            TP S+RL  P PP  P  +  P   PP
Sbjct: 202 GFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQSRRLPSPLPPSRPPRIPPPRHVPP 261

Query: 241 PSRRPRTPPPQKSPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPP--PPSSPLLPSPLPSP 279
           PS+RPR PPP++   +PPPS     PPP S+RPR PP + +PPP  PPS P  PSP PSP
Sbjct: 262 PSKRPRIPPPRQ---VPPPS-----PPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPSPSP 321

BLAST of CcUC09G180350 vs. ExPASy TrEMBL
Match: A0A6J1G5W9 (extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43
Identity = 185/450 (41.11%), Postives = 204/450 (45.33%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKS---PPPPS--------RRLPPSPPPLRRPRTPSLPRFP 60
           SA+  WF   N T  F  RHK    PPPPS        R LPPSPPP  RPR P  P  P
Sbjct: 22  SADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWRCLPPSPPP-SRPRQPRTP--P 81

Query: 61  PAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPRFSLLPPRHPQTPPS--------PRF--- 120
           P+  + PRTPPSR   P  PP R PRTPP   F  LPPR P+TPPS        PR    
Sbjct: 82  PSRPQKPRTPPSRPRQPRTPPPRRPRTPPPRWFPPLPPR-PRTPPSSPLPTPQNPRKIIV 141

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 142 GGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPPNSSTPPHNVYLLPNMQSLNKCDFRR 201

Query: 181 ------------------------------------------------------SPPPPR 240
                                                                 SPPPP 
Sbjct: 202 AKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMKFSITPQSRCLPSPPPPS 261

Query: 241 RPR--------TPPSQRLSPPPP---PPLVLSSPPPPSRRPRTPPPQKSPPLPPPSPMVS 279
           RP          PPS+R   PPP   PP +  SPPPPS+RPR PPP++ PP        S
Sbjct: 262 RPPRIPPPRHVPPPSKRPRIPPPRQVPPPLSPSPPPPSKRPRIPPPRQVPP--------S 321

BLAST of CcUC09G180350 vs. ExPASy TrEMBL
Match: A0A6J1D4K0 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111017245 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-42
Identity = 157/321 (48.91%), Postives = 184/321 (57.32%), Query Frame = 0

Query: 1   SANEGWFWGHNCTLPFKPRHKSPPPP---SRRLPPSPPPLRRPRTPSLPRFPPAPSRHPR 60
           SA   WF  +NC    K RH+SPPPP   +RR P  PPP  + R    P  P  P   P 
Sbjct: 23  SAMGDWFQDYNCPWHSKQRHRSPPPPHPRTRRFP--PPPQSKTRRFPPPPHPSLPLPPPP 82

Query: 61  TPPSRRFPPSPPPS--RYPRTPPSPRFSLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLS 120
            P +RRFPP P P   R+P  PP P+    PP  PQ P +  F PPPP+     P  R S
Sbjct: 83  QPKTRRFPPPPQPKSRRFP-PPPQPKTRRFPPPPPQ-PKTRLFQPPPPQ-----PKTRRS 142

Query: 121 PPPPPPLVLSSPPPPSRRPRTPPPQKSPPLPPPSPMVSPPPPRSRRPRTPP------SQQ 180
           PPPPP  +L   P PS  P  PPP   PP  PPSP+ SPPPP+ +  R+PP      ++ 
Sbjct: 143 PPPPPSSLLPPSPLPSLLPPPPPP---PPPLPPSPLPSPPPPQPKTRRSPPPPPQSKTRP 202

Query: 181 IPPPPPSSPLLPSPLPS-PSLPPSP--LPTPQ------MGGSKQWQLGFDYNDWALKNGP 240
            PPPPP SPL P PLPS PSLPP P   P PQ      +GGS+ W LGFDY++WALKNGP
Sbjct: 203 SPPPPPPSPLPPPPLPSPPSLPPPPSSRPPPQSPRKIIVGGSENWHLGFDYSNWALKNGP 262

Query: 241 FY-----------------------LPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKD 279
           F+                       L NM+SF+NCDL +   +AN TQG+GDGF+FVLK 
Sbjct: 263 FFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVLKQ 322

BLAST of CcUC09G180350 vs. TAIR 10
Match: AT4G22505.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 8.4e-05
Identity = 94/204 (46.08%), Postives = 109/204 (53.43%), Query Frame = 0

Query: 17  KPRHKSPPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRT 76
           +PR ++PPPP     PSPPP R P+TP     PP P R PRTPP       PPP R PRT
Sbjct: 29  RPRPRTPPPPRTPRTPSPPPPRTPKTP-----PPPPPRTPRTPP-------PPPPRTPRT 88

Query: 77  PPSPRFSLLPPRHPQTPP---------SPRFSP-PPPRRPRTPPSQR--LSPPPPPPLVL 136
           PP P     PPR P+TPP         SPR  P  PP+ P T P Q   +SPP  PP   
Sbjct: 89  PPPP-----PPRTPRTPPTAPPRTPPVSPRIPPILPPKTPPTAPPQTPPVSPPKSPP--- 148

Query: 137 SSPP--PPSRRPRTPP--PQKSPPL-----PPPSPMVSPPPPRSRRPRTPPSQQIP--PP 196
           +SPP  PP   PRTPP  P + PPL     PP SP  +PP P  R P T P +  P  PP
Sbjct: 149 NSPPRAPPLSPPRTPPTSPPRVPPLSPPRTPPTSPPRAPPIPPPRTPSTSPPRAPPLSPP 208

BLAST of CcUC09G180350 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 7.1e-04
Identity = 87/196 (44.39%), Postives = 99/196 (50.51%), Query Frame = 0

Query: 15  PFKPRHKSPPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPPSRRFPPSP---PPS 74
           P  P +  PPPP    PP PPP+  P  P  P  PP P   P  PPS   PP P   PP 
Sbjct: 444 PPPPVYSPPPPPP---PPPPPPVYSPPPPPPPPPPPPPVYSP-PPPSPPPPPPPVYSPPP 503

Query: 75  RYPRTPPSPRFSLLPP---RHPQTPPSPRFSP-----PPPRRPRTPPSQRLSPPPPPPLV 134
             P  PP P +S  PP     P  PPSP  +P     PPP  P +PP  + SPPPP P  
Sbjct: 504 PPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYY 563

Query: 135 LSSPPPP--SRRPRTPPPQKSPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPPPPSSPLLP 194
            SSPPPP  S  P +PPP  SPP PP  P +SPPPP +     PP+    PPPP  P + 
Sbjct: 564 YSSPPPPHSSPPPHSPPPPHSPP-PPIYPYLSPPPPPTPVSSPPPTPVYSPPPP-PPCIE 623

Query: 195 SPLPSPSLPPSPLPTP 198
            P P P +  SP P P
Sbjct: 624 PPPPPPCIEYSPPPPP 633

BLAST of CcUC09G180350 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.3e-04
Identity = 86/200 (43.00%), Postives = 102/200 (51.00%), Query Frame = 0

Query: 23  PPPPSRRLPPSPPPLRRPRTPSLPRFPPAPSRHPRTPPSRRFPPSPPPSRYPRTPPSPRF 82
           P PP    P  P P  RP +P  P+  P PS  P +PP R    SPPP +    PP P+ 
Sbjct: 74  PSPPHPPSPKPPTPSSRPPSPLSPKKSP-PSPKP-SPPPRTPKKSPPPPKPSSPPPIPKK 133

Query: 83  SLLPPRHPQTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPP--PQ 142
           S  PP+    PP+P+ SPPPP+    PPS + SPPPP P    SP PP  +P TPP  P+
Sbjct: 134 SPPPPKPSSPPPTPKKSPPPPKPSSPPPSPKKSPPPPKP----SPSPP--KPSTPPPTPK 193

Query: 143 KSPP------LPPPSPMVSPPPPRSR----RPRTPPSQQIPPPPPSSPLLPSPLPSP--- 198
           KSPP       PPPSP  SPPPP+      +P TPP      PPP  P  P P PSP   
Sbjct: 194 KSPPSPPKPSSPPPSPKKSPPPPKPSPSPPKPSTPPPTPKKSPPPPKPSQPPPKPSPPRR 253

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902031.11.4e-7865.51extensin-3-like [Benincasa hispida][more]
XP_011649199.15.4e-6257.51leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypoth... [more]
XP_023533130.16.2e-5052.53extensin-like [Cucurbita pepo subsp. pepo][more]
XP_023007476.11.3e-4442.82extensin-like isoform X1 [Cucurbita maxima][more]
XP_023007477.11.3e-4443.69extensin-like isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LIT92.6e-6257.51Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585... [more]
A0A6J1L0M66.5e-4542.82extensin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1[more]
A0A6J1KYU06.5e-4543.69extensin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1[more]
A0A6J1G5W91.6e-4341.11extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1[more]
A0A6J1D4K01.8e-4248.91leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO... [more]
Match NameE-valueIdentityDescription
AT4G22505.18.4e-0546.08Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT4G13340.17.1e-0444.39Leucine-rich repeat (LRR) family protein [more]
AT1G44191.19.3e-0443.00ECA1 gametogenesis related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..204
NoneNo IPR availablePANTHERPTHR34052GLYCINE-RICH PROTEIN-LIKEcoord: 199..223
coord: 223..278
NoneNo IPR availablePANTHERPTHR34052:SF1GLYCINE-RICH PROTEIN-LIKEcoord: 199..223
coord: 223..278
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 199..276

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G180350.1CcUC09G180350.1mRNA