CcUC09G173000 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTCGTGAAATCAGGTTTCGTCACTTTGTTAGCTAGCATTTTAGATTTACTTTACCTTACGTTTTACAGTTCCTGCCTATGGTCTGAATTTGCAACAATCTTTCCGAAGTTCATAATAGTGTAGTTCTAGGATTTTCTCAAACAATTTTAAGTAAAGAAACAAGCAAATCATTAATCAATGTATAAGTAAACTGAAAGAAATTGTAAAAAACAACAAAAGATTATCATAAAATGCAGTTTTAGGAGACTAATGGAGCTTGAACATTATTACAAATACTGGAGACTAATAGCACTACTAAGAACGAGTGTATATATATATATATGAAAAGATATGTTTGCTAAAATGGATTGGTAGGTCTCTTTAGTGGGTTGTGAGATAGGTTATTTTCTCTCATTTTACATGGGTCTTTCTCTTGGTAACAGTCTTAGAACTTTGTTGTATTGAGATTGGGCTGTGGAAGAGATTAAAAATGTCTATTCTTGTTGAACATGAATTTATCCTCTAAGGGAGTTCAGACAAACTTTTGTCTAGGACCTCTGGTGGCTTTGAATTTACCTCTCGACTTGCCATGGATGCTTATAGAAAAGTTTGTTGATGAAATTCCACATCTGAATCAGAGTCTCCAGTTAGTTCCAAAGCCTTTGACTTTCAACATCTCACTGAGGAAGTTCCAATCAACCTTGTTAAAAGCTTTTTCCACATCAAGTTTTATGACCACCTCCTTTTGTTTTTTCTTTGCCAAGCTTCAATGATCTCATTGGCTATGAGCAATGCATCCAATATTTGTCTTCCTTCCATAAATGCTGATTGGTGATCCATAATTGTCAAAACACATCTACAACTGTGGCAATAGGTGCGTGATTTGGTAATACACCAATTTGGCCACTATTCGTAACTAAAATGATTTCTTTCGCTTCTGAATCCCAAATAATTCGATTTGGAGTTCAGAACACTAAGATTTAAGGTCATGTCTTCAATTTGCTCTTCATTTCTAAGTTCGTAGCCTTCGCAGTAGCGTCATCGATGTTACCTACCAAATAAAAGACTTGTTTGGGAAGACCATCTAATTCTCCGAAAAGGATTAATTTAAACCCTCTAATTGTTTCTGCTAGGCCAGTGTATTTCCTGGGGGAACCAGTAAATACTTCTGCTACGAGAAAAGGTTGGGATAAGAAACACTCAATTTTTCATGCTCGTGCTACGTTTAAGCAATCCTCTTCGAATAATTCATCCAAGTATAGCTATAATGTCCTGCAGTTCTTTGTATTGTTGTGAGGTTTGTTTAACTCTTTGTGCAGCTTCATAATGTTCTTCACCAACGATTCGAATGAAAGGCCTTTTGTGAGTTAGTTTGAGAATACATGGGAGATCATTTTGTAAATACAAGTAAAGAGACTAATTGGTCTACAATCTTCAACTCTTCTAGCATTAGGTAGATATATGTTTCATTAACATTGGAGTTGATAATACCTTCATGAGAAGAAAAATCTTGGAGCACCCGAATTAGATCGCGTTGAGGATGTTCCAAATTTTTTTAAAGAACTCTGCATTGGAACCATCTGGTCTAGGAGATTTATGAGAGGCCAAAGCCTTAATTGCCAACCAGATTTCTTCTTCCGTGAAGGGATCTTCTGAACCCCTACTTTGCTCATTGCTTTTAAGTATCCCAATCGATAGGGAGTGGTAGAAATATGCTGCCTTGTTTCTTGGTGAAAAGATCCTTGTAGAAGGAAATAAATTCAGCCTCAATCTTGGTGTCTTGAAGTAGGCTAGTGTTCTATGCAGTGAGAACTTTTGTAATACTATTTTTTTCCTTTTTGTGGCAATAACATACTTATGGGAAAAACAAAAAAGTGGTGTTTTCATCCCTTTACGGAGCCATTTTGTCTTACATTTCTACCTCCATCTAATCTCCTCATCAGTTGTAATGTTAAGTAGTCTTTCTCTAATTGCAAATCTTGTTTCATTTAGGGCCTCTGGAAAGCTATTTTCTTCTCTCTCTTTAGCATTATATACCAATTCCTCGAGGGAAACTTTCTGCGATGTGTTAAATGTCGAAGTTGGTCAAGTTCCATTTCTTAAGGGCAGATTTCAACCCTTTTATTAA ATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTCGTGAAATCAGGTTTCGTCACTTTGTTAGCTAGCATTTTAGATTTACTTTACCTTACGTTTTACAGTTCCTGCCTATGGCCAGTGTATTTCCTGGGGGAACCAGTAAATACTTCTGCTACGAGAAAAGGTTGGGATAAGAAACACTCAATTTTTCATGCTCGTGCTACGTTTAAGCAATCCTCTTCGAATAATTCATCCAAGTATAGCTATAATGTCCTGCAGTTCTTTGTATTGTTGGCCTCTGGAAAGCTATTTTCTTCTCTCTCTTTAGCATTATATACCAATTCCTCGAGGGAAACTTTCTGCGATGTGTTAAATGTCGAAGTTGGTCAAGTTCCATTTCTTAAGGGCAGATTTCAACCCTTTTATTAA ATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTCGTGAAATCAGGTTTCGTCACTTTGTTAGCTAGCATTTTAGATTTACTTTACCTTACGTTTTACAGTTCCTGCCTATGGCCAGTGTATTTCCTGGGGGAACCAGTAAATACTTCTGCTACGAGAAAAGGTTGGGATAAGAAACACTCAATTTTTCATGCTCGTGCTACGTTTAAGCAATCCTCTTCGAATAATTCATCCAAGTATAGCTATAATGTCCTGCAGTTCTTTGTATTGTTGGCCTCTGGAAAGCTATTTTCTTCTCTCTCTTTAGCATTATATACCAATTCCTCGAGGGAAACTTTCTGCGATGTGTTAAATGTCGAAGTTGGTCAAGTTCCATTTCTTAAGGGCAGATTTCAACCCTTTTATTAA MSLANGVKSCAKLLKSSESLFVKSGFVTLLASILDLLYLTFYSSCLWPVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSSKYSYNVLQFFVLLASGKLFSSLSLALYTNSSRETFCDVLNVEVGQVPFLKGRFQPFY Homology
BLAST of CcUC09G173000 vs. NCBI nr
Match: KCW90640.1 (hypothetical protein EUGRSUZ_A02744 [Eucalyptus grandis]) HSP 1 Score: 62.4 bits (150), Expect = 3.7e-06 Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of CcUC09G173000 vs. NCBI nr
Match: AAO74044.1 (ORF50f [Pinus koraiensis]) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-04 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of CcUC09G173000 vs. NCBI nr
Match: PLY90581.1 (hypothetical protein LSAT_6X37840 [Lactuca sativa]) HSP 1 Score: 55.8 bits (133), Expect = 3.5e-04 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of CcUC09G173000 vs. ExPASy TrEMBL
Match: A0A059DJQ4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02744 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06 Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of CcUC09G173000 vs. ExPASy TrEMBL
Match: Q85X22 (ORF50f OS=Pinus koraiensis OX=88728 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 9.9e-05 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of CcUC09G173000 vs. ExPASy TrEMBL
Match: A0A2J6LTA0 (Cytochrom_C_asm domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_6X37840 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|