CcUC09G172350 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGAACTGGTGGAGGGGATAGGCCAACTTCTGGAGATAGAAATCAAGGCTTCAGTTTCACACTAGAACTGGGGCTGACGAGCTTGTATACTCCAAGAAGATTGCGATGGATCCCAAGCTTTTCTAACAATCATAAGGGGGCTGCTTGTGAGTTCGAAGAGTCTGTGGGCAGCGGTGTACAGAGGCCCACCATTCTAGCATCACTTCAACAATGTATATAAATAGATAAATCACAAGAGTGCATGGTAGATCAAAAAAATACACTCTTATTTTACGAGTTCTCAATTCAAAGCAAAATGAGATCAATGTACGAAGAAAAAAGGCATTTGGCAGTGGTTCTCGTACTTGTGTTGTTGGCGGTGGCATGATCCAACCATGCACGCCGGTTCCACTCCCACTCCCAACATGGCACATTCATGTGGTAAATGGGTTGAACAATGAAACCCTATTGGTTCATTGTAAGTCTAAAGATGATGATTTGAGAAACCACAGTTTGAGTACTAAAGGAGAGGAACTCTAATGGACTGTTAAGGTTAACTTTTTTGGAACAACGTTGTTTTGGTGCTACCTACAAAAGCCAAATTTTAGCGTATCATTTGAATCCTTTTGGGTTGAAAGCACTCACCCTTGGTTCACTTCTAGGTGTTTTAACAAAAATTGCATTTGGATCGCTAAAGATGATGGAATTTACTTGGAGAAACAATCCTGCTAATGTTGATGAATGTGTACATCAGTGGAAAAAAAATTGCTTGAGTTATTTGTATCCTTTCAACTATTAAAAAACTAATCTAAATAAAATAATAATATGACACATATACTAAGTTACCCTTGCTATCCTTTTTTTATGTCATCAAGATATTACCATTGGTACAAGTGCCGTCTATTGTTTTAATTAGGCTATCATTTATGCTTCGAATTTGAATCCATCTACTGACTTTACTTATACTTTTAGTTAAAAAAGACATGTCACCTTATATTTGAACATAATTGTGGTTTAAGTCGGGTGAATTTCGTTAAATAAATTTGGAATATGAAATAAGGAAACTAAAAAAATTATTGAGTTTTTAAATATACCAGCTATAAAATATAACAAAATATTATTATCTAATATTTTTTATAGTAATAAATTGGTCCTGGCAGGGCTCGAACCCACAACCTTCGGCTCATAAGACCAATGCTCTAACCAACTGAGCTACGGGACCTTGGACAATATATATCAAAACTTAATACTCAAATAATGAAAATCAACACGAATAAAATTTGCTTCTCATATTACTATAAATTGGTTTGCTTTAGTGTAACCTCCATTTAATTAATGTTTCTCACATACTTTAATTGACAGTATCTCCTTAGAAAAATAAATTAAACAAAATAATCATAATTCAACTAAACATGTTCTTAAAAATAAAAGAAAGAAAGAAATAAGAAAGGTTATATAACTTATTTAGTAATGTCTTTCTCTGTCCCTTTTTTCTTTTAATATTTTCCTTATCATACCTAATTATTTTTTAAAAGAAAAATTGTTTTAAATGACAAAAACAGTTGAAAATATTTATAATAATAGCAAAATACTACCGTCTATATATGCAATATACCGCGATAGATTGTGATATACTACTATGACACAGATAGATATATAAAGTAGTCTATCACAAATAAATAGACAATGAAATTTTACTATATTTGTAAATATTTTGATTCATTTTTCTATATTTGAAAACAGTTAAAAAATTAATCCAATTCGATTAAAATATTTCAGTACTTCTCAAAAGTATAAATAATTTTTTTAAAAAAAAAGAAAAAAAAAACTTCTGATATTTATGTTGAATCATCCATTGATAAACTATTATATTGATATACCAATCCAATTGTATATGTCTACATTAATAATATTTTTATTATAATATCAACATTAATGATATTTTGTTTAAAAAATGTCATATAGTACCTGTCAAGACAGCTCACTATTTGTCAATCAAATCCCCAATTAGTGGAAATATTTCAAACTTGAGAAATTAGTTCCAAAATTATTTCCTTGAATCTTCCTTCAATTTTGTTTACTGTTGAAAATCTCCCTCATTGATTGCATTTTATAATCTTAGTTCCAACCTTTTATTTTATTTTGGTTTAATTCTTTCCTTTCTTGGCTTTTCAAATCCTTGTGTATATATTTATTCTTGATTTTAAGTAGTGTGTGTAAGTGCAGAAAATTCAAAGACTAATACTCATTATTTTCCAGTCAATATACTATTTGCTTTGTCCCATATGCTAAAGTTAAACCCATGATATTTGTATCAAAAGTGAAGAACATGTACTCAATGGACGAATTTTCTCATCTTGATGATCTCACCAAATTAATATATATATATATATTTGACAATATGTGTAGTATAGAATTGAACTTCGCTCGTTGAAGTTAATCGTTCAAGTTTATGTCAACGTTTTGTTATGAAAATTAATGAAATACTATTCATACGTTTCAAATGTTCTCAATTCAATGAATTTCGTTCACGAAAATGTTAATAATATCTACCTAATTAATGGAATGTTATCATTTGGTAATTGAAAAGGAAAGTTATATTATGCATAACAAAAAATTTAGGCAGAATATTAATTTTATTTCCATAATTAAAACCATACCATTGCATTTCTTCATTATCTTACCAGTGGTATAAGTATGTATATTTATTCACACATACATCCATGTCCAACATCAATTATTGTAACAAAGAGATAGATAAAGAAAAGTTAGGTTAATAAGAAAATGATGATGAGGAATGTGGCTGTTTTGTTGGTCGTGACGGCAGCTTTGGTTGGGGCTGAGGTTTCGAGGGTGGTGATACCTCCGCTACCGCCTTCGAGGTATTACATTCACATTGTAAACAGGCTAAGCAACCTGGGCATACTTGCGCACTGCCAGTCCAAGGACGATGATTTGGGATATCACCATTTGCTTAACCGTGGAGATGAATTCCAATGGAACTTTAAGGTCAACTTTTGGAGAACAACCTTGTTTTGGTGCAGAATTGAGAGGCCCGATGGGTATGTCGCTTTTGAAGTCTTTTGGCCTGAGAAAAAGAATCGTTGGCTCCGCGATAGGTGTGGTAGTCAAGGAATTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAACATGCCTCTTAATGTTGACGAGTTCGTTCACAAATGGATCATTACTAGATAA ATGGGCAGAACTGGTGGAGGGGATAGGCCAACTTCTGGAGATAGAAATCAAGGCTTCAGTTTCACACTAGAACTGGGGCTGACGAGCTTGTATACTCCAAGAAGATTGCGATGGATCCCAAGCTTTTCTAACAATCATAAGGGGGCTGCTTGTGAGTTCGAAGAGTCTGTGGGCAGCGGTGTACAGAGGCCCACCATTCTAGCATCACTTCAACAATCTTTGGTTGGGGCTGAGGTTTCGAGGGTGGTGATACCTCCGCTACCGCCTTCGAGGTATTACATTCACATTGTAAACAGGCTAAGCAACCTGGGCATACTTGCGCACTGCCAGTCCAAGGACGATGATTTGGGATATCACCATTTGCTTAACCGTGGAGATGAATTCCAATGGAACTTTAAGGTCAACTTTTGGAGAACAACCTTGTTTTGGTGCAGAATTGAGAGGCCCGATGGGTATGTCGCTTTTGAAGTCTTTTGGCCTGAGAAAAAGAATCGTTGGCTCCGCGATAGGTGTGGTAGTCAAGGAATTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAACATGCCTCTTAATGTTGACGAGTTCGTTCACAAATGGATCATTACTAGATAA ATGGGCAGAACTGGTGGAGGGGATAGGCCAACTTCTGGAGATAGAAATCAAGGCTTCAGTTTCACACTAGAACTGGGGCTGACGAGCTTGTATACTCCAAGAAGATTGCGATGGATCCCAAGCTTTTCTAACAATCATAAGGGGGCTGCTTGTGAGTTCGAAGAGTCTGTGGGCAGCGGTGTACAGAGGCCCACCATTCTAGCATCACTTCAACAATCTTTGGTTGGGGCTGAGGTTTCGAGGGTGGTGATACCTCCGCTACCGCCTTCGAGGTATTACATTCACATTGTAAACAGGCTAAGCAACCTGGGCATACTTGCGCACTGCCAGTCCAAGGACGATGATTTGGGATATCACCATTTGCTTAACCGTGGAGATGAATTCCAATGGAACTTTAAGGTCAACTTTTGGAGAACAACCTTGTTTTGGTGCAGAATTGAGAGGCCCGATGGGTATGTCGCTTTTGAAGTCTTTTGGCCTGAGAAAAAGAATCGTTGGCTCCGCGATAGGTGTGGTAGTCAAGGAATTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAACATGCCTCTTAATGTTGACGAGTTCGTTCACAAATGGATCATTACTAGATAA MGRTGGGDRPTSGDRNQGFSFTLELGLTSLYTPRRLRWIPSFSNNHKGAACEFEESVGSGVQRPTILASLQQSLVGAEVSRVVIPPLPPSRYYIHIVNRLSNLGILAHCQSKDDDLGYHHLLNRGDEFQWNFKVNFWRTTLFWCRIERPDGYVAFEVFWPEKKNRWLRDRCGSQGICIWTAKDDGIYLRNMPLNVDEFVHKWIITR Homology
BLAST of CcUC09G172350 vs. NCBI nr
Match: XP_038896432.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 250.8 bits (639), Expect = 1.1e-62 Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of CcUC09G172350 vs. NCBI nr
Match: XP_038896433.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 238.4 bits (607), Expect = 5.4e-59 Identity = 99/135 (73.33%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of CcUC09G172350 vs. NCBI nr
Match: XP_038896423.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 237.7 bits (605), Expect = 9.2e-59 Identity = 97/134 (72.39%), Postives = 116/134 (86.57%), Query Frame = 0
BLAST of CcUC09G172350 vs. NCBI nr
Match: XP_022933268.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 235.0 bits (598), Expect = 6.0e-58 Identity = 99/136 (72.79%), Postives = 113/136 (83.09%), Query Frame = 0
BLAST of CcUC09G172350 vs. NCBI nr
Match: XP_022933333.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-56 Identity = 97/136 (71.32%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.3e-18 Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09 Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 9.1e-09 Identity = 31/98 (31.63%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.8e-07 Identity = 28/95 (29.47%), Postives = 47/95 (49.47%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy TrEMBL
Match: A0A6J1F497 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440333 PE=3 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.9e-58 Identity = 99/136 (72.79%), Postives = 113/136 (83.09%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy TrEMBL
Match: A0A6J1F4G4 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440599 PE=3 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 7.1e-57 Identity = 97/136 (71.32%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.2e-56 Identity = 96/130 (73.85%), Postives = 109/130 (83.85%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy TrEMBL
Match: A0A1S3CG61 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500543 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.2e-56 Identity = 96/130 (73.85%), Postives = 109/130 (83.85%), Query Frame = 0
BLAST of CcUC09G172350 vs. ExPASy TrEMBL
Match: A0A5A7SNG3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11658G00010 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 7.9e-56 Identity = 92/141 (65.25%), Postives = 113/141 (80.14%), Query Frame = 0
BLAST of CcUC09G172350 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 92.4 bits (228), Expect = 4.5e-19 Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of CcUC09G172350 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-17 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 0
BLAST of CcUC09G172350 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of CcUC09G172350 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 0
BLAST of CcUC09G172350 vs. TAIR 10
Match: AT2G24870.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09 Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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