CcUC09G172070 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G172070
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 8403207 .. 8405947 (+)
RNA-Seq ExpressionCcUC09G172070
SyntenyCcUC09G172070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGAACTTCCGGGGCGCGAAGCTGCAGCATTTTGCTTGGAGGACGAACCCCATTCCATGGCCTCGGCGACCGCTCGTTGGCGTGCCTCAGCTGTTTCATCATTGTGAAGATAGTCGATGGGTTTGGATAGATTCATCAAATTGGAATCATCAACGGTTGATGGGACATCACCTAACGACGAAGACCTCGACGACTGTGTGGCTTCTGCTCCTAAGAAGCTGAGAGCAGTGACAACGTCACAGATCAACGGTCGGGTCGTCGCTTCCTCATGGAGGCACATGGCGGCGACCGCGATCGCTTGGTTCAGAGCCCTTATAGGAAAGTCTCCACCAAGAAGAGGATCTGCCAACTCCTTGAATCTAGCTGGTTCCTTGAATATTGGGCATGCCTACATATAGTTCAAAATAAAAAAAAAAAAATTTGACGGATTAGGAATACTATTTAGGTGCAGCCTAAGTTCCTTGCTCCCCTTCTTTTAGTGGTGCAGCATGGGTTATACAAGAGATGAGTGCAATCCGGCTGCACTTAAATTAGCTTTTTCCTCCCTAGATTTCTATTTTTAGCGTTCCTTCTATGAAACAAGTCATGTCAACGTTTCGTTAAGAGTATAAGATAGGAACAAAAGAAAGTAGACTCACCCAAGCGACCAAGTTTTGTTGTTTAGCTGGACGAGTGTTGTCGATGACTCTCTTGCCAGTGATGAGTTCCAACAAAACGACTCCAAAGCTATAGACATCAGATTTGAGAGTAAGTTGACCAGTTCTTTGATACTCAGGAGCACAATATCCATAGGTTCCCATAACTCTGGAGGAAACATGGGACTTGTCTCCAACAGGACCAAGCTTTGCAAGTCCAAAATCTGACAGCTTTGCATTGTAATCACCGTCCAATAGTATGTTTGATGATTTCAAGTCTCTATATATCACTGGTGGGTTGGCTTTGTTATGCAAGTATTCTAGCCCTTTTGCTGCTCCCAACCCTACTTTCATCCTTGTTCCCCAATCCAATGCCTTCCTTCCATATGGAAGATCTACAATACCAAATCAAAAACACAAACACAACTTGATGAGTCGATGTTTATTCGCTCGAAACTTCCATCGAGATTTTGATAATTAGTTGACTAATTTCACATGCATATTTGTTTGTTTTTGCAAAAATTGAGCAAAACGGAGTAATTGAAGTAACGATATCGAGAAAAATAGGTCAAAAAGTATTTGAAGCCAAAGGGATTTTTTTAGAAATTAGTGTAAAAATATAAAAAGTTTAGGACCGATTTGATAAGAGTTATGTTTTAGATATTTACCAAGTAGATGATCTTCTAGAGATCCTAAAGGCATGTACTCATAGACCAAGAGTCTTTGATCACCATCTGCACAATAGCCAATGAGATTGACAAGGTTTTGATGGTGTAAAAGGCTTAGCATCAAAACTTCCACAAGAAACTCTCTGTTCCCTTGCAATCCATTTCTGTCAAGCTGCTTCACTGCTACAACCTGTGACATGTCACACATTCATTAGTGTTACTACAAAATTACATTTCAATACTCGCCTGTCTTTGTTTGATAACTATTTTGTATTTGTATGTGTGTTATTTTAGTTCGTGGCTATTATAGTCTATAGGTTATAATAGTTTGTGTCTGAGGTGCATACTATTTTAGTCTAGGTGTATATTATTTTAGTTTGAGTCAACGAGGTTAAGAGAGGATGAGTAAAATATAGTAAATACGGTAACAAAAAAAAAAAAAAAAAGAGATTTGAAATAATAATACTGTAGTTAATTGTGGGTTATAATGACATTAAACCAAAATCTTAAACAGTTACTTTGAAGAAACAACAATATGGTTATCAAAGGAGTGTAAAGAAACCAGGTAAGGGGTGAACGTAGTTGTTACCTGATTAGTTTTATCGAGTTTTCCTTTGTAAACTCTCCCAAACCCTCCTTCACCAATGAGACATTCTTGACGGAAATTCTTTGTAGCAGTGGCCAATTCTCTGAAGGTGAAGGTTTGTGCTGCAATGTTATTCTTTTCCGCAATAATCTCATTCTCTTTCTCTTTCTCTTTCTCTGCTTCCCTTTGAACCTGATTTCCCTTTGGAATGTCTGTTCATTTATTGCAAATTAAAATACACACCATAGATATAATTTTACTAACAATCGTCAACTTATAAGTGATTTTGGGAAGTTGAATAAATATGTATCTATTTCTTGTTTCAACTTTTCGATTATGATTTTGAATTTGCTAGCTAATTATTTCATTAATGTGACACGTTGATGTTGACTATCAAGACAGGGTCTAACTCAATGTTTGCATTAGAGAATAAAATAGTTAATAAATAAAAAATTTGAAATACTATTTCTATCTCTATACTTTTAGTTTTTGTTTCTTTTGGTCCTTATACTTTTAGAATATTCATCTTGGTCCATATATTTTTAACTTTAGTTCATTTTGGTTCCATTTTCAGCTTTAGTTCATCTTGAGCCTTGTATTTTTTAAAAAGTGACTATTTTGGTCTCTCTATTTTCATTTTTAAGAGAACAAATGATATATTTTTTGAAAATTCAAGGACCAAAATGAACAAAAACCCAAAGTACAGAAATTAAAATGGAAGAAAACAAAAAGTACAAGGATCTTTTTAGTATTTAAGCCTTAAAAAAAAAGGCAAATGAAAATTTTTAAATTGATATATATATTTTTTTTTGGATATGGTTAAGCCTTACCGTCTAAAACAAGAGTAA

mRNA sequence

GAAGAAGAACTTCCGGGGCGCGAAGCTGCAGCATTTTGCTTGGAGGACGAACCCCATTCCATGGCCTCGGCGACCGCTCGTTGGCGTGCCTCAGCTTCGATGGGTTTGGATAGATTCATCAAATTGGAATCATCAACGGTTGATGGGACATCACCTAACGACGAAGACCTCGACGACTGTGTGGCTTCTGCTCCTAAGAAGCTGAGAGCAGTGACAACGTCACAGATCAACGGTCGGGTCGTCGCTTCCTCATGGAGGCACATGGCGGCGACCGCGATCGCTTGGTTCAGAGCCCTTATAGGAAAGTCTCCACCAAGAAGAGGATCTGCCAACTCCTTGAATCTAGCTGGCTTAGCATCAAAACTTCCACAAGAAACTCTCTGTTCCCTTGCAATCCATTTCTGTCAAGCTGCTTCACTGCTACAACCTGTGACATGTCACACATTCATTAGTCCTTACCGTCTAAAACAAGAGTAA

Coding sequence (CDS)

GAAGAAGAACTTCCGGGGCGCGAAGCTGCAGCATTTTGCTTGGAGGACGAACCCCATTCCATGGCCTCGGCGACCGCTCGTTGGCGTGCCTCAGCTTCGATGGGTTTGGATAGATTCATCAAATTGGAATCATCAACGGTTGATGGGACATCACCTAACGACGAAGACCTCGACGACTGTGTGGCTTCTGCTCCTAAGAAGCTGAGAGCAGTGACAACGTCACAGATCAACGGTCGGGTCGTCGCTTCCTCATGGAGGCACATGGCGGCGACCGCGATCGCTTGGTTCAGAGCCCTTATAGGAAAGTCTCCACCAAGAAGAGGATCTGCCAACTCCTTGAATCTAGCTGGCTTAGCATCAAAACTTCCACAAGAAACTCTCTGTTCCCTTGCAATCCATTTCTGTCAAGCTGCTTCACTGCTACAACCTGTGACATGTCACACATTCATTAGTCCTTACCGTCTAAAACAAGAGTAA

Protein sequence

EEELPGREAAAFCLEDEPHSMASATARWRASASMGLDRFIKLESSTVDGTSPNDEDLDDCVASAPKKLRAVTTSQINGRVVASSWRHMAATAIAWFRALIGKSPPRRGSANSLNLAGLASKLPQETLCSLAIHFCQAASLLQPVTCHTFISPYRLKQE
Homology
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BLAST of CcUC09G172070 vs. NCBI nr
Match: KAF7845530.1 (Serine/threonine-protein kinase PBS1 [Senna tora])

HSP 1 Score: 55.5 bits (132), Expect = 5.0e-04
Identity = 31/50 (62.00%), Postives = 34/50 (68.00%), Query Frame = 0 

Query: 63  SAPKKLRAVTTSQINGRVVASSWRHMAATAIAWFRALIGKSPPRRGSANS 113
           S P+KLRA TTS ING   ASS RHMAA A AWF +L    P R GSA+S
Sbjct: 20  SVPRKLRAETTSDINGLADASSSRHMAAIATAWFSSLAPNFPLRLGSASS 69

The following BLAST results are available for this feature:
BLAST of CcUC09G172070 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF7845530.15.0e-0462.00Serine/threonine-protein kinase PBS1 [Senna tora][more]
BLAST of CcUC09G172070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC09G172070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC09G172070 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G172070.1CcUC09G172070.1mRNA