CcUC08G155370 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGGCACCGTAGGTTGACATGGAAAAGTCATACATTTGAATTGAGTAGGCCAAAGCCAAAGTTGTGGTAATTAAAAGGGGTTGGTTTCGTTTCTTCTATAGCATTCATAATTCTCCATTAATCATAACAGTAATCCTTTAGAAAGTGCCCATTCTTTCGATTTCTTCTTCTTCTTCTTCTTCAACCTACCTTCGTTCCACCTTCCAATCCCACCGCCACCTCCATGGATCAAACCTTAAAACAACTCCCACAAGCTTGCCTTTCCCAACCACCAAAAATCCCAAAAACTCAACTTTCCATATCATCAATTTTAGAGATAAAATGGCCATTTACAGCGGCGACGCCGGTGGACTTCCTCCTCTCCCCAACACTCCTTTGTAATTCAATTCTGTTAGATATAATATTAAATTTTAAGTTTTTGAGTTGATCATTGATTTAATAAATTTCATATTTGCAATTGGATTTGAATTATTGCTGCCCATTATGGGTAGCTGGGGTGCTATTTTCTGCAATTCTATCAATTTGGAAGACCAAGAACTATTGGGGGCCTTTTCTTACGTTAAAAGGTAAGGAGTATTGTATATAGGAATATAATCCTAAACCCTAATCCTCTCTTAGGGTAACTATTTAGATCCCCATTAATAACCATCTTGTTTTTATTTTTAGTTTTTTAGAATTAAACCTATTTTTTTCAATTTCTTATAATAATGTACATCTTTTAACTAATTTTTTTTTTTAATTTTTCAAAACTTGGCTTGATTTTTAAAAACGTTGGCCGTTCGAAGCAAGAATTTTATAGATGAAATTGATGTTTATATGCTTAAATTTCAAAAACCGAAAATCAAATTATTATCAAACATAACCTTAGTTTCCCGTTTTTAGTTTTGAAAAATTAAGCATATTTCCCTTGAATTTCTTATAATGATTTTGCAGGTAAAAAAGTTGAATTCTTAGCCAACTTTAAAAAACAAAAACAAGTTTATTTATAGTTTTCAAAATTTTGATACAAAGTAGATAACAATACAGAGAGAAAATGTATAGGTGAAATAAGTTGTCTATAAATAATAATAAATATTGGTAAACACAATAAATTTGATTTATTTATTTATTATTATTTTAATTCTAAAAAAATAATAATAATAAATAAATAAATAGCATCAGAGTCAACTAATAAATTTGATTTTTAAATTAAATGGAGAGATATATATAATTTGGCGTTGGTTTAGGTTACGTTGAATATATGATGATTTTGTATAGAGAAAGTGGTGGAGGACGTGGCGGAAATGGTGGAGACGGCAGGGGAGAGAGTGGATAAGGTGGCGGAAGAGATTGGTGAACATCTTCCGGAAGGCAGCAAACTCCAAAAGGCTGCATTATTCGTCGAAAATGCAGCCGAAAGGATTGCTAAAGATGCTGATTTGGCAGGAGATATTATTGAAAAGGTTAAGCCTTTTCTCCAAACTCTATATTTTCGTCTTACATCTTTCTTTCTATTTCTGTATGATTTAACGTTATACATGAATTCAAATTTCTATTCTATCCGATAAGGCCACATGAAATCTTCCATAATTTAGCCTTATAATTATAATAGTTACTCTATTAGTAGTTTGTTGACTGATTAAATGTTTTGGATGAGACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGATCACAATAACGATTTGAATTAAGAGGACTGGATAAACAAATCTGTATATTGCTAACATATTTGTTGGTGGATCGAGGAAGGTTTGATGAAGTGTTTTTACTGTTTATGGTGGGGGGTTTGATTATTTGTATGGCTATTATCAATTGCGTGTGTGTGCTCCCATTTCCCCTCTATATTTAAACCAAAGTACTTTTGGTGGGTAAAATTTTAAGTTTGAATTACTAGTTTTCGTATTCTTAACAATGCATGATATTATTTACTTTTATCCTCGTGTTTTATGAGGACTCCCTACCTAACCAAATGACGTACTAATCCACCCTTCTCCTTTGACAAATTTCCAATTTTTTGCAATCCTGTCTTTTTCACTTTACAATTCATTACGTTTTATTTTGCTTACTTAGCTAACCTTGACTATCAATTATGCCACTTTGTGATCATTTATGTGAAATCTTCCATGTTCTTTTTAACATGTTTAAATGGGTTTGCAACCAGAAAGACCCAAACACCAAATATTCATGGGTTTTAATTTTTTCACGTTGGATCCTCAGTTGGATAATATAGGTTCTATCTCAAAACCAATTGGCATGAGAGAAGTAACTCATCTATCTTACAAAGAGTGTGAGGTTTCTTCATTTTTCCAATGTGAGATTCTCAACTAATACCATTATGGATCTTATCCACTTTTTTTGGACCAAATATATATGTTTGGACTTCATAGACTCTGATATTGTATTAGCGGGAGTAACTTATCTATTTTATCAAGATTAGAAGGTGATTTCTCCATTTTTTTAATGTTTGATCATTATAAAGATGGAAAGACACTACCATCTTTATAAAATGGGACAGTTACAAATATAACAATCAAACCCAAAGTATTAACAAATATAATAACACAATACAAAATAATTTGTAAATATAGTAAAATTTAGATCCAATTCTTAGAGTCTATCGGTGAAAGACTATATTGTTAATAGGAATCTATCGTTGATAGATTTTGCTTTAATTACAATTTTAAAAATGTTTCTATACACTTCATTGTTATCTTAAAGTGTTCCATGATCATCTAACAACATTTTAATTTAATAATAAGCATTATTATTTAATTTATTATTAATGAAGTTTTTTTTTTTTTTTTCCTAATGTGATTTCTTATGAATATAAACCTCAGATTGAGGCAGCGGAAAACGAGTTGAGTTCATTTATTAAGCAAAGTGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAAAGAATGATCAAACCGAAGCCCTCAACGAACAAAGCAAGGAGCAATCTCTTAATTAAATGATATAAAATTATATGGTTGGATTATATATAATGATCGATGTACCATTCATTTGCAACATAATATATTCATTTGTGTGCATAATAACTTTAATGGGGGCTACCTCCCAATCTAAACAATTGTTTCTGTAGATAAAGTGCACCTATTACCACTTTAAATGTCCTATTGTTGATTGACTTGCCTG GTAGGCACCGTAGGTTGACATGGAAAAGTCATACATTTGAATTGAGTAGGCCAAAGCCAAAGTTGTGGTAATTAAAAGGGGTTGGTTTCGTTTCTTCTATAGCATTCATAATTCTCCATTAATCATAACAGTAATCCTTTAGAAAGTGCCCATTCTTTCGATTTCTTCTTCTTCTTCTTCTTCAACCTACCTTCGTTCCACCTTCCAATCCCACCGCCACCTCCATGGATCAAACCTTAAAACAACTCCCACAAGCTTGCCTTTCCCAACCACCAAAAATCCCAAAAACTCAACTTTCCATATCATCAATTTTAGAGATAAAATGGCCATTTACAGCGGCGACGCCGGTGGACTTCCTCCTCTCCCCAACACTCCTTTCTGGGGTGCTATTTTCTGCAATTCTATCAATTTGGAAGACCAAGAACTATTGGGGGCCTTTTCTTACGTTAAAAGAGAAAGTGGTGGAGGACGTGGCGGAAATGGTGGAGACGGCAGGGGAGAGAGTGGATAAGGTGGCGGAAGAGATTGGTGAACATCTTCCGGAAGGCAGCAAACTCCAAAAGGCTGCATTATTCGTCGAAAATGCAGCCGAAAGGATTGCTAAAGATGCTGATTTGGCAGGAGATATTATTGAAAAGATTGAGGCAGCGGAAAACGAGTTGAGTTCATTTATTAAGCAAAGTGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAAAGAATGATCAAACCGAAGCCCTCAACGAACAAAGCAAGGAGCAATCTCTTAATTAAATGATATAAAATTATATGGTTGGATTATATATAATGATCGATGTACCATTCATTTGCAACATAATATATTCATTTGTGTGCATAATAACTTTAATGGGGGCTACCTCCCAATCTAAACAATTGTTTCTGTAGATAAAGTGCACCTATTACCACTTTAAATGTCCTATTGTTGATTGACTTGCCTG ATGGATCAAACCTTAAAACAACTCCCACAAGCTTGCCTTTCCCAACCACCAAAAATCCCAAAAACTCAACTTTCCATATCATCAATTTTAGAGATAAAATGGCCATTTACAGCGGCGACGCCGGTGGACTTCCTCCTCTCCCCAACACTCCTTTCTGGGGTGCTATTTTCTGCAATTCTATCAATTTGGAAGACCAAGAACTATTGGGGGCCTTTTCTTACGTTAAAAGAGAAAGTGGTGGAGGACGTGGCGGAAATGGTGGAGACGGCAGGGGAGAGAGTGGATAAGGTGGCGGAAGAGATTGGTGAACATCTTCCGGAAGGCAGCAAACTCCAAAAGGCTGCATTATTCGTCGAAAATGCAGCCGAAAGGATTGCTAAAGATGCTGATTTGGCAGGAGATATTATTGAAAAGATTGAGGCAGCGGAAAACGAGTTGAGTTCATTTATTAAGCAAAGTGGAGAAAGTAAAGAAGAAGACGACGCAAAGCAAAAGAATGATCAAACCGAAGCCCTCAACGAACAAAGCAAGGAGCAATCTCTTAATTAA MDQTLKQLPQACLSQPPKIPKTQLSISSILEIKWPFTAATPVDFLLSPTLLSGVLFSAILSIWKTKNYWGPFLTLKEKVVEDVAEMVETAGERVDKVAEEIGEHLPEGSKLQKAALFVENAAERIAKDADLAGDIIEKIEAAENELSSFIKQSGESKEEDDAKQKNDQTEALNEQSKEQSLN Homology
BLAST of CcUC08G155370 vs. NCBI nr
Match: XP_038886505.1 (uncharacterized protein LOC120076681 isoform X1 [Benincasa hispida]) HSP 1 Score: 199.1 bits (505), Expect = 3.2e-47 Identity = 110/136 (80.88%), Postives = 123/136 (90.44%), Query Frame = 0
BLAST of CcUC08G155370 vs. NCBI nr
Match: XP_038886506.1 (uncharacterized protein LOC120076681 isoform X2 [Benincasa hispida] >XP_038886571.1 uncharacterized protein LOC120076742 isoform X1 [Benincasa hispida]) HSP 1 Score: 150.6 bits (379), Expect = 1.3e-32 Identity = 81/106 (76.42%), Postives = 89/106 (83.96%), Query Frame = 0
BLAST of CcUC08G155370 vs. NCBI nr
Match: XP_038886507.1 (uncharacterized protein LOC120076681 isoform X3 [Benincasa hispida] >XP_038886572.1 uncharacterized protein LOC120076742 isoform X2 [Benincasa hispida]) HSP 1 Score: 150.2 bits (378), Expect = 1.7e-32 Identity = 79/98 (80.61%), Postives = 87/98 (88.78%), Query Frame = 0
BLAST of CcUC08G155370 vs. NCBI nr
Match: XP_011649672.1 (uncharacterized protein LOC105434653 isoform X2 [Cucumis sativus] >KAE8652133.1 hypothetical protein Csa_022545 [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 7.2e-31 Identity = 77/127 (60.63%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of CcUC08G155370 vs. NCBI nr
Match: XP_011649671.1 (uncharacterized protein LOC105434653 isoform X1 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-30 Identity = 76/126 (60.32%), Postives = 96/126 (76.19%), Query Frame = 0
BLAST of CcUC08G155370 vs. ExPASy TrEMBL
Match: A0A6J1HCK6 (uncharacterized protein LOC111462754 OS=Cucurbita moschata OX=3662 GN=LOC111462754 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.4e-24 Identity = 72/124 (58.06%), Postives = 88/124 (70.97%), Query Frame = 0
BLAST of CcUC08G155370 vs. ExPASy TrEMBL
Match: A0A6J1K717 (uncharacterized protein LOC111492223 OS=Cucurbita maxima OX=3661 GN=LOC111492223 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.2e-24 Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of CcUC08G155370 vs. ExPASy TrEMBL
Match: A0A5A7VBX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004630 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21 Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CcUC08G155370 vs. ExPASy TrEMBL
Match: A0A1S3BDR2 (uncharacterized protein LOC103488552 OS=Cucumis melo OX=3656 GN=LOC103488552 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21 Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CcUC08G155370 vs. ExPASy TrEMBL
Match: A0A6J1BVN6 (uncharacterized protein LOC111005138 OS=Momordica charantia OX=3673 GN=LOC111005138 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 3.3e-21 Identity = 69/127 (54.33%), Postives = 91/127 (71.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|