CcUC07G132720 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G132720
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr07: 4653698 .. 4654380 (+)
RNA-Seq ExpressionCcUC07G132720
SyntenyCcUC07G132720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAGGATGAACGAGCTAGAAGGTTAGGAAGAATGAGTAGCAACTGCGAATCCAGGAACGTGAGTAAGAATCAGGGAGTGCGAGCAAGAATCTTAGAGTATCATCTGAGAATTTATTTTGTTTGACATTATGCTTGTTGCAACTTCCTCATTGTCATTGTGATTGTCAGGTAAATCGACTAGAGCGGACACTACAAGAAAAATAGATTTCTATAACATAAGAGACATCAAATTAGGATGAAAATTGAAGAGAAAGGAAAAAAAAAGTGTCATAAATGACAAAAACACGCGTTTTGGCAAGAAAAAAAGCTATTTTCAAATTTTGCTTGATTTATAACCGTTTTTAAATGTCATTATTATAAATTTGATTTTTTAAATTGTATGGTCAATCAATTCTATTTAGTAATATAAAATAATATAAATCTCTTTTATTTTTTATTAATAAATATAATATGTCATAAATGATATAAAAGCATCCTTACACTACATTGGAAACCCTTGCACACTAAACACGACTTTCCCTCCTCACACAAGAAGACCCCGAACAGAAACCCTGTTTTCGGCCATCGTCCTCTGGGCCACTCTGGTCTCCGGCTGTCTGTCGTCGTGGTCCTCCGTGTAAGCGCCTGCTGTCTCCGATCTCCAGCCGTCGTCTTCCGCGCCAAATCTTGCAAAGAAACCATT

mRNA sequence

AAGAGGATGAACGAGCTAGAAGGTTAGGAAGAATGAGTAGCAACTGCGAATCCAGGAACGTGAGTAAGAATCAGGGAGTGCGAGCAAGAATCTTAGACATCCTTACACTACATTGGAAACCCTTGCACACTAAACACGACTTTCCCTCCTCACACAAGAAGACCCCGAACAGAAACCCTGTTTTCGGCCATCGTCCTCTGGGCCACTCTGGTCTCCGGCTGTCTGTCGTCGTGGTCCTCCGTGTAAGCGCCTGCTGTCTCCGATCTCCAGCCGTCGTCTTCCGCGCCAAATCTTGCAAAGAAACCATT

Coding sequence (CDS)

ATGAGTAGCAACTGCGAATCCAGGAACGTGAGTAAGAATCAGGGAGTGCGAGCAAGAATCTTAGACATCCTTACACTACATTGGAAACCCTTGCACACTAAACACGACTTTCCCTCCTCACACAAGAAGACCCCGAACAGAAACCCTGTTTTCGGCCATCGTCCTCTGGGCCACTCTGGTCTCCGGCTGTCTGTCGTCGTGGTCCTCCGTGTAAGCGCCTGCTGTCTCCGATCTCCAGCCGTCGTCTTCCGCGCCAAATCTTGCAAAGAAACCATT

Protein sequence

MSSNCESRNVSKNQGVRARILDILTLHWKPLHTKHDFPSSHKKTPNRNPVFGHRPLGHSGLRLSVVVVLRVSACCLRSPAVVFRAKSCKETI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G132720.1CcUC07G132720.1mRNA