CcUC06G122820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G122820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NADH dehydrogenase subunit 9
Location	CicolChr06: 25217876 .. 25218448 (+)
RNA-Seq Expression	CcUC06G122820
Synteny	CcUC06G122820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAACCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGGTCAAAAAAAGAGAAAGATCGGAACATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTCAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGAAGATTTGAAGTGGTCTATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCAGTGCAGACGAAGTAACACGAATATCTCCGGTAGTCAGTCTATTTCCATCAGTCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCCATCAATCATCCGGATCTACACCGTATATCAACAGATTATGGTTTCGAGGGCCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTTGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA

mRNA sequence

ATGGATAACCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGGTCAAAAAAAGAGAAAGATCGGAACATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTCAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGAAGATTTGAAGTGGTCTATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCAGTGCAGACGAAGTAACACGAATATCTCCGGTAGTCAGTCTATTTCCATCAGTCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCCATCAATCATCCGGATCTACACCGTATATCAACAGATTATGGTTTCGAGGGCCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTTGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA

Coding sequence (CDS)

ATGGATAACCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGGTCAAAAAAAGAGAAAGATCGGAACATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTCAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGAAGATTTGAAGTGGTCTATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCAGTGCAGACGAAGTAACACGAATATCTCCGGTAGTCAGTCTATTTCCATCAGTCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCCATCAATCATCCGGATCTACACCGTATATCAACAGATTATGGTTTCGAGGGCCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTTGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA

Protein sequence

MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFGVSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

Homology

[Close]

BLAST of CcUC06G122820 vs. NCBI nr
Match: YP_009913657.1 (NADH dehydrogenase subunit 9 [Luffa acutangula] >QLJ93018.1 NADH dehydrogenase subunit 9 [Luffa acutangula])

HSP 1 Score: 394.0 bits (1011), Expect = 7.1e-106
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. NCBI nr
Match: QEX95857.1 (NADH dehydrogenase subunit 9 [Cercis canadensis] >QVD39126.1 NADH dehydrogenase subunit 9 [Gleditsia sinensis])

HSP 1 Score: 394.0 bits (1011), Expect = 7.1e-106
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKMERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. NCBI nr
Match: AAF86492.1 (NADH dehydrogenase subunit 9 [Lupinus angustifolius] >AAF86493.1 NADH dehydrogenase subunit 9 [Lupinus luteus] >QTC32824.1 NADH dehydrogenase subunit 9 [Ormosia boluoensis])

HSP 1 Score: 392.1 bits (1006), Expect = 2.7e-105
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWV K ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVNKMERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. NCBI nr
Match: YP_004222820.1 (NADH dehydrogenase subunit 9 [Vigna radiata] >YP_009709882.1 NADH dehydrogenase subunit 9 [Phaseolus vulgaris] >QWX88142.1 NADH dehydrogenase subunit 9 [Indigofera tinctoria] >QWX88233.1 NADH dehydrogenase subunit 9 [Robinia pseudoacacia] >QXE45614.1 NADH dehydrogenase subunit 9 [Pachyrhizus erosus] >BAT21331.1 NADH dehydrogenase subunit 9 [Vigna radiata var. radiata] >BBB37738.1 NADH dehydrogenase subunit 9 [Vigna radiata var. sublobata])

HSP 1 Score: 391.7 bits (1005), Expect = 3.5e-105
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKK ERSEHGNRSDT TDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKMERSEHGNRSDTKTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. NCBI nr
Match: AZP40295.1 (NADH dehydrogenase subunit 9 [Cucumis melo var. momordica])

HSP 1 Score: 391.7 bits (1005), Expect = 3.5e-105
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRK RF VVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKLRFSVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy Swiss-Prot
Match: Q95748 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Arabidopsis thaliana OX=3702 GN=NAD9 PE=1 SV=2)

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-102
Identity = 178/190 (93.68%), Postives = 179/190 (94.21%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQ IFKYSWETLPKKWVKK ERSEHGNR DTNTDYLFQLLCFLKLHTYTRVQV IDIC
Sbjct: 1   MDNQFIFKYSWETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFLKLHTYTRVQVLIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRIS VVSLFPS G WEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RI TDYGFEGHPLRKD PLSGYV+VRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVQVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy Swiss-Prot
Match: P80261 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Solanum tuberosum OX=4113 GN=NAD9 PE=1 SV=3)

HSP 1 Score: 370.2 bits (949), Expect = 1.4e-101
Identity = 176/190 (92.63%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQ IFKYSWETLPKKWVKK ERSEHGNR DTNTDYLFQLLCF+KLHTYTRVQV IDIC
Sbjct: 1   MDNQFIFKYSWETLPKKWVKKMERSEHGNRFDTNTDYLFQLLCFMKLHTYTRVQVLIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRK+RFEVVYNLLS RYNSRIRVQTSADEVTRIS VVSLFPS G WEREVWDMFG
Sbjct: 61  GVDYPSRKQRFEVVYNLLSIRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           V SINHPDL RI TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VFSINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy Swiss-Prot
Match: Q33994 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta trigyna OX=19769 GN=NAD9 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-99
Identity = 173/188 (92.02%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQ IFKYSWETLPKKWVKK E+SEHGNR DTNTDYLFQLLCFLKLHTYTR QV IDIC
Sbjct: 1   MDNQFIFKYSWETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIR+QTSADEVTRIS VVSLFPS G WEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRISSVVSLFPSAGWWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RI TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRS 189
           ASPWEQR+
Sbjct: 181 ASPWEQRN 188

[Close]

BLAST of CcUC06G122820 vs. ExPASy Swiss-Prot
Match: Q34011 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Patellifolia webbiana OX=35923 GN=NAD9 PE=3 SV=2)

HSP 1 Score: 361.7 bits (927), Expect = 5.1e-99
Identity = 172/188 (91.49%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQ IFKYSWETLPKKWVKK E+SEHGNR DTNTDYLFQLLCFLKLHTYTR QV IDIC
Sbjct: 1   MDNQFIFKYSWETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIR+QTSADEVTRIS VV LFPS G WEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRISSVVRLFPSAGWWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RI TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRS 189
           ASPWEQR+
Sbjct: 181 ASPWEQRN 188

[Close]

BLAST of CcUC06G122820 vs. ExPASy Swiss-Prot
Match: Q37787 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta vulgaris OX=161934 GN=NAD9 PE=2 SV=3)

HSP 1 Score: 360.9 bits (925), Expect = 8.7e-99
Identity = 172/188 (91.49%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQ IFKYSWETLPKKWVKK E+SEHGNR DTNTDYLFQLLCFLKLHTYTR QV IDIC
Sbjct: 1   MDNQFIFKYSWETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFLKLHTYTRFQVLIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIR+QT ADEVTRIS VVSLFPS G WEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRLQTCADEVTRISLVVSLFPSAGWWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RI TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRS 189
           ASPWEQR+
Sbjct: 181 ASPWEQRN 188

[Close]

BLAST of CcUC06G122820 vs. ExPASy TrEMBL
Match: A0A7D5Y316 (NADH dehydrogenase subunit 9 OS=Luffa acutangula OX=56866 GN=nad9 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy TrEMBL
Match: A0A5J6NL69 (NADH dehydrogenase subunit 9 OS=Cercis canadensis OX=49801 GN=nad9 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106
Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKMERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy TrEMBL
Match: Q9MD76 (NADH dehydrogenase subunit 9 OS=Lupinus luteus OX=3873 GN=nad9 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.3e-105
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWV K ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVNKMERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy TrEMBL
Match: Q7ILE4 (NADH dehydrogenase subunit 9 OS=Lupinus angustifolius OX=3871 GN=nad9 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.3e-105
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWV K ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVNKMERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. ExPASy TrEMBL
Match: E9KZM7 (NADH dehydrogenase subunit 9 OS=Vigna radiata var. radiata OX=3916 GN=nad9 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.7e-105
Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQSIFKYSWETLPKKWVKK ERSEHGNRSDT TDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQSIFKYSWETLPKKWVKKMERSEHGNRSDTKTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VSSINHPDL RISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. TAIR 10
Match: ATMG00070.1 (NADH dehydrogenase subunit 9 )

HSP 1 Score: 386.3 bits (991), Expect = 1.4e-107
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60
           MDNQ IFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC
Sbjct: 1   MDNQFIFKYSWETLPKKWVKKMERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDIC 60

Query: 61  GVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSVGRWEREVWDMFG 120
           GVD+PSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPS GRWEREVWDMFG
Sbjct: 61  GVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 121 VSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDF 180
           VS INHPDL RISTDYGFEGHPLRKDLPLSGYV+VRYDDPEKRVVSEPIEMTQEFRYFDF
Sbjct: 121 VSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVQVRYDDPEKRVVSEPIEMTQEFRYFDF 180

Query: 181 ASPWEQRSDG 191
           ASPWEQRSDG
Sbjct: 181 ASPWEQRSDG 190

[Close]

BLAST of CcUC06G122820 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J )

HSP 1 Score: 42.0 bits (97), Expect = 6.4e-04
Identity = 22/60 (36.67%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 97  RISPVVSLFPSVGRWEREVWDMFGVSSINHPDLHRISTDYGFEGHPLRKDLPLSGYVEVR 156
           RI  V  ++ S    ERE +DM G++  +HP L RI     + G PLRKD     + E++
Sbjct: 96  RIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRKDYIAPNFYEIQ 155

The following BLAST results are available for this feature:

BLAST of CcUC06G122820 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913657.1	7.1e-106	98.42	NADH dehydrogenase subunit 9 [Luffa acutangula] >QLJ93018.1 NADH dehydrogenase s...	[more]
QEX95857.1	7.1e-106	98.42	NADH dehydrogenase subunit 9 [Cercis canadensis] >QVD39126.1 NADH dehydrogenase ...	[more]
AAF86492.1	2.7e-105	97.89	NADH dehydrogenase subunit 9 [Lupinus angustifolius] >AAF86493.1 NADH dehydrogen...	[more]
YP_004222820.1	3.5e-105	97.89	NADH dehydrogenase subunit 9 [Vigna radiata] >YP_009709882.1 NADH dehydrogenase ...	[more]
AZP40295.1	3.5e-105	97.89	NADH dehydrogenase subunit 9 [Cucumis melo var. momordica]	[more]

BLAST of CcUC06G122820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q95748	1.3e-102	93.68	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Arabidopsis thaliana OX...	[more]
P80261	1.4e-101	92.63	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Solanum tuberosum OX=41...	[more]
Q33994	1.3e-99	92.02	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta trigyna OX=19769 G...	[more]
Q34011	5.1e-99	91.49	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Patellifolia webbiana O...	[more]
Q37787	8.7e-99	91.49	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta vulgaris OX=161934...	[more]

BLAST of CcUC06G122820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5Y316	3.4e-106	98.42	NADH dehydrogenase subunit 9 OS=Luffa acutangula OX=56866 GN=nad9 PE=3 SV=1	[more]
A0A5J6NL69	3.4e-106	98.42	NADH dehydrogenase subunit 9 OS=Cercis canadensis OX=49801 GN=nad9 PE=3 SV=1	[more]
Q9MD76	1.3e-105	97.89	NADH dehydrogenase subunit 9 OS=Lupinus luteus OX=3873 GN=nad9 PE=3 SV=1	[more]
Q7ILE4	1.3e-105	97.89	NADH dehydrogenase subunit 9 OS=Lupinus angustifolius OX=3871 GN=nad9 PE=3 SV=1	[more]
E9KZM7	1.7e-105	97.89	NADH dehydrogenase subunit 9 OS=Vigna radiata var. radiata OX=3916 GN=nad9 PE=3 ...	[more]

BLAST of CcUC06G122820 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00070.1	1.4e-107	96.32	NADH dehydrogenase subunit 9	[more]
ATCG00420.1	6.4e-04	36.67	NADH dehydrogenase subunit J	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	PFAM	PF00329	Complex1_30kDa	coord: 35..152 e-value: 5.0E-32 score: 111.1
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	GENE3D	3.30.460.80	NADH:ubiquinone oxidoreductase, 30kDa subunit	coord: 3..131 e-value: 4.0E-26 score: 94.1
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	SUPERFAMILY	143243	Nqo5-like	coord: 33..184
None	No IPR available	PANTHER	PTHR10884	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3	coord: 3..188
None	No IPR available	PANTHER	PTHR10884:SF14	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 3, MITOCHONDRIAL	coord: 3..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G122820.1	CcUC06G122820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity