CcUC06G119360 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G119360
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCytochrome c biogenesis B
LocationCicolChr06: 15606950 .. 15612158 (-)
RNA-Seq ExpressionCcUC06G119360
SyntenyCcUC06G119360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGGTAACCCTCTCCTACGCTACTGGTGGACTGTTGCACAGAAAGGCCGACAGAAGCTACGTTTCTTAGCGCGCTTTTCAAGTGCTTAGCTTCTGCTAGCGGCGGGCGGCAAGGCCATAAAGTCAGTTCAGTTGGAAGCCTAAGCCAAGAAGGTACGAACGAAGTGACGGGCCCTTTTAGAGTTTTAGAGATAGGGTAGGGGGGCGGCTTGATTGTGATAGTAATTTCGAACATCTCTCCCTTTTCTCTTAGCGTGCACAGTTTGCTTGCATGCCGCTTTAGGCACATCTCTCTTTCTTAGTTTCACGCTGGCCTAAGTCAGTCTTTTAGTAAGCGTATAGTTGCAGCTATTTAGTGTATAAGCAATTCTTTAGTGGACGCACCGAAAGGGCGGGATAAGACAAGGCGGTGGAGGTTGGTTGAAGATGATGTTACGCGGCGTTCAGAACCAGCCTTGAAGTGAATGAATTTGAAAGAACGAAGAAGTAAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTTTTGAAATAGACTTTTCATGTCACTCCCATTTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCGTACCTCTATTGAAATAGAATGGTTTCATTTTCCTTCATCGCTTGGTTATTCCTCCCCGGTCGTATCTCTTTTTCCAATTTAGGTATCGATTAGCTTACACTATTGTCTGGCACATTTTCCTCCGGACCCTCGATTCGATTGGTTTCCAAGGATGTTGAGCCGGGTAGGTGAGCCGTGTATCTGGGAGGCAGTTAAAAGAAGGGCTTGTTCGGCAGCTGTTGGAATGCAATAATGATCTCTTTTTTGTCCCAGCGCATAAAGATTGAATATATATCCAATCTCTAGTGGTGGTGACACCAACCAAGATGTATGTTGTCTGACCCGACCTCAGACTCTTCCTTCCCGACCTATTTGACCCACTGGCCGCTGTTATTTACGTGGTATCCCGAGATCGCATTCCTCCCGGGAACACCCGAAACAAAGATGTGAACCGGGTAAATAGCACTGGAAGAGAGATGTTTCAAATTCATTCACGTCAAGGCTGGTTCTGGACGCCGCGTAACATCTTCTTCAACCAACCTCCACGGCCTTGTCTTATCCCGTCCTTTCGGTGCGTCCACTAAAGACTTGCTTATACACTAATTAGCTGCAACTATACGCTTGCATGCCGCTTTCGGCACATCTCTCTCTCTTAGTTTCACGCTCGCCTAAGTCAGTCTTGTAGTAAGCGTATAGTAGCAGCTATTTAGTGTATACGCAATTCTTTAGTGGGCGCACCGAAAGGGCGGCATAAGACAAGGCGGTGGAGGTCGGTTGAAGATGATGTTATGCGGCGTTCAGAACCAGCCGTGAAGTGAATGAATTAGAAAGAACGAAGAAGTCAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTTTTGAAATAGACTTTTCATGTCACTCCCATTTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCGTACCTCTATTGAAATAGAATGGTTTCATTTTCCTTCATCGCTTGGTTATTCCTCCCCGGTCGTATCTCTTTTTCCAATTTAGGTATCGATTAGCTTACACTATTGTCTGGCACATTTTCCTCCGGACCCTCGATTCGATTGGTTTCCAAGGATGTTGAGCCGGGTAGGTGAGCCGTGTATCTGGGAGGCAGTTAAAAGAAGGGCTTGTTCGGCAGCTGTTGGAATGCAATAATGATCTCTTTTTTGTCCCAGCGCATAAAGATTGAATATATATCCAATCTCTAGTGGTGGTGACACCAACCAAGATGTATGTTGTCTGACCCGACCTCAGACTCTTCCTTCCCGACCTATTTGACCCACTGGCCGCTGTTATTTACGTGGTATCCCGAGATCGCATTCCTCCCGGGAACACCCGAAACAAAGATGTGAACCGGGTAAATAGCACTGGAAGAGAGATGTTTCAAATTCATTCACGTCAAGGCTGGTTCTGGACGCCGCGTAACATCTTCTTCAACCAACCTCCACGGCCTTGTCTTATCCCGTCCTTTCGGTGCGTCCACTAAAGACTTGCTTATACACTAATTAGCTGCAACTATACGCTTGCATGCCGCTTTCGGCACATCTCTCTCTCTTAGTTTCACGCTCGCCTAAGTCAGTCTTGTAGTAAGCGTATAGTAGCAGCTATTTAGTGTATACGCAATTCTTTAGTGGGCGCACCGAAAGGGCGGCATAAGACAAGGCGGTGGAGGTCGGTTGAAGATGATGTTATGCGGCGTTCAGAACCAGCCGTGAAGTGAATGAATTAGAAAGAACGAAGAAGTCAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTTTTGAAATAGACTTTTCATGTCACTCCCATTTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCGTACCTCTATTGAAATAGAATGGTTTCATTTTCCTTCATCGCTTGGTTATTCCTCCCCGGTCGTATCTCTTTTTCCAATTTAGGTATCGATTAGCTTACACTATTGTCTGGCACATTTTCCTCCGGACCCTCGATTCGATTGGTTTCCAAGGATGTTGAGCCGGGTAGGTGAGCCGTGTATCTGGGAGGCAGTTAAAAGAAGGGCTTGTTCGGCAGCTGTTGGAATGCAATAATGATCTCTTTTTTGTCCCAGCGCATAAAGATTGAATATATATCCAATCTCTAGTGGTGGTGACACCAACCAAGATGTATGTTGTCTGACCCGACCTCAGACTCTTTCTTCCCGACCTATTTGACCCTCTGGCCGCTGTTATTTAGGTGGTATCCCGAGATCGAATTCCTCCCGGGAACACACGAAAGAAAGATATGAACTGGGTAAATAGAAATGGAAAAGAGATGTTTCCAATTCATTCAAATCCGAAGCTTTTTCTACATCCATATGATCTACTAAAGTCGATCGGTATTGCCCATATAATGAAAGCAGATCTTGGTCCATAGAGTCCCAAGAAGGTAAGAACTCCAACCTGTCCGATGCTTCTTCGGCCAAATACAATATACAAGTGGGACCTGCACTATGAGCAAGCTGTGCGAAAAACCGCTTCTTTTTTCCGGTTTCGCAACAACTTGGGCGAAATGGGGTTCTACCGGGAAACCATGGATTTTTGAGTTTTCGCCATTGGTTACTGGTCGAGCCACTGGAATGGAATGAGATAAGAATCTCTGGAGATCTTTCCTCTCCACTTACTCGTAACAGGCTTTCCCTCTGTAGAAGACTTCTTCCGAATGGCATAATTGTCCGATTTCTTCCTCGATCTTCAAAGAAGACTGACTTCTCCTACTCCTCCTTCTCCTTTAGGATAGNACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTAACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTGTTTTCTGTGGTTTTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCG

mRNA sequence

ATGTACGAAAGGCCGACAGAAGCTACGTTTCTTAGCGCGCTTTTCAAGTGCTTAGCTTCTGCTAGCGGCGGGCGGCAAGGCCATAAATGGACGCACCGAAAGGGCGGGATAAGACAAGGCGGTGGAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCAACCAGCCGTGAAGTGAATGAATTAGAAAGAACGAAGAAGTCAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCAACCAGCCGTGAAGTGAATGAATTAGAAAGAACGAAGAAGTCAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCAATGGTTTCATTTTCCTTCATCGCTTGGTTATTCCTCCCCGGTCGTATCTCTTTTTCCAATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTGTTTTCTGTGGTTTTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCG

Coding sequence (CDS)

ATGTACGAAAGGCCGACAGAAGCTACGTTTCTTAGCGCGCTTTTCAAGTGCTTAGCTTCTGCTAGCGGCGGGCGGCAAGGCCATAAATGGACGCACCGAAAGGGCGGGATAAGACAAGGCGGTGGAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCAACCAGCCGTGAAGTGAATGAATTAGAAAGAACGAAGAAGTCAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCAACCAGCCGTGAAGTGAATGAATTAGAAAGAACGAAGAAGTCAGGAAATGAGACGACTCTGTCTTTCACTATATCATATACGGATCTTCCCCTCTACACCAATCACGAGTTTTACTCCATTCCTCTCGTATACCGTCGTAACGCCCTTGATGCTAGGTCCGATTCCGATCCCTCCGTTGTTTCCTTTGCCTCCCGCACCTTTTCCTCGAAATGCGAAAGAAGATGGTACACTCGACTTGTATTATTTAAGTGCTTATGCCTTGCCAAAGATCCTACTTCTACAATTGGTAGGCCACCGGGTCATTCAAATAAGTTGTGCTTTCTCTGGTTTTCCCATGTTAAACCTTCCGTACCAATTCGGCCGACCCGGAATGGATCGGTTAAACCTTCTATTAGGGAGCCTGGACTTGACTCTTCTGTGAGGTATTCATTCTCGTTCGGCCCCTGGAATCACATCCAGCCGCGGTTGGAACAGCTCGCTAAATCCAACTACTTAACCTACTTCATTTCCCCTAACCGTTTCTCAATGGTTTCATTTTCCTTCATCGCTTGGTTATTCCTCCCCGGTCGTATCTCTTTTTCCAATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTGTTTTCTGTGGTTTTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCG

Protein sequence

MYERPTEATFLSALFKCLASASGGRQGHKWTHRKGGIRQGGGGNETTLSFTISYTDLPLYTNHEFYSIPLVYRRNALDARSDSDPSVVSFASRTFSSKCERRWYTRLVLFKCLCLAKDPTSTIGRPPGHSNKLCFLWFSHVKPSVPIRPTRNGSVKPSIREPGLDSSVRYSFSFGPWNHIQPRLEQLAKSNYLTYFISPNRFSTSREVNELERTKKSGNETTLSFTISYTDLPLYTNHEFYSIPLVYRRNALDARSDSDPSVVSFASRTFSSKCERRWYTRLVLFKCLCLAKDPTSTIGRPPGHSNKLCFLWFSHVKPSVPIRPTRNGSVKPSIREPGLDSSVRYSFSFGPWNHIQPRLEQLAKSNYLTYFISPNRFSTSREVNELERTKKSGNETTLSFTISYTDLPLYTNHEFYSIPLVYRRNALDARSDSDPSVVSFASRTFSSKCERRWYTRLVLFKCLCLAKDPTSTIGRPPGHSNKLCFLWFSHVKPSVPIRPTRNGSVKPSIREPGLDSSVRYSFSFGPWNHIQPRLEQLAKSNYLTYFISPNRFSMVSFSFIAWLFLPGRISFSNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS
Homology
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BLAST of CcUC06G119360 vs. NCBI nr
Match: YP_009913630.1 (cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis B [Luffa acutangula])

HSP 1 Score: 312.4 bits (799), Expect = 1.0e-80
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. NCBI nr
Match: AEN56106.1 (cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c biogenesis B [Cucumis melo var. momordica])

HSP 1 Score: 308.5 bits (789), Expect = 1.5e-79
Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPM KLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMFKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTLSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. NCBI nr
Match: YP_004849329.1 (cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis B [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 9.7e-79
Identity = 149/154 (96.75%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GH VIQISC+FC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTLSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

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BLAST of CcUC06G119360 vs. NCBI nr
Match: QXE45588.1 (cytochrome c biogenesis B [Prosopis glandulosa])

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-77
Identity = 149/154 (96.75%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPML+LPYQFGRSGMDRLNILLGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTS
Sbjct: 106 GFPMLQLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPTVSRTSIETEWFHV SSIGYSSPFVSLFPIS
Sbjct: 166 LPPTVSRTSIETEWFHVLSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. NCBI nr
Match: YP_009498132.1 (cytochrome c biogenesis B [Senna tora] >YP_009504845.1 CcmB [Senna occidentalis] >YP_009559989.1 cytochrome c biogenesis B [Acacia ligulata] >YP_009704700.1 cytochrome c biogenesis B [Libidibia coriaria] >YP_009704741.1 cytochrome c biogenesis B [Haematoxylum brasiletto] >QEX95854.1 cytochrome c biogenesis B [Cercis canadensis] >QHE65824.1 cytochrome c biogenesis B [Castanospermum australe] >QXE45550.1 cytochrome c biogenesis B [Ceratonia siliqua] >AWW13934.1 cytochrome c biogenesis B [Senna tora] >AWW13966.1 CcmB [Senna occidentalis])

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-77
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPML+LPYQFGRSGMDRLNI LGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTS
Sbjct: 106 GFPMLQLPYQFGRSGMDRLNIPLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPTVSRTSIETEWFHV SSIGYSSPFVSLFPIS
Sbjct: 166 LPPTVSRTSIETEWFHVLSSIGYSSPFVSLFPIS 199

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BLAST of CcUC06G119360 vs. ExPASy Swiss-Prot
Match: P93280 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMB PE=2 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-56
Identity = 123/153 (80.39%), Postives = 125/153 (81.70%), Query Frame = 0 

Query: 573 NLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCG 632
           +LG I I  LF F  A F RNEKEDGTLELYYLS YCLPKILLLQLVGH VIQISCVFCG
Sbjct: 47  HLGLIWISLLFSFLSALFFRNEKEDGTLELYYLSTYCLPKILLLQLVGHWVIQISCVFCG 106

Query: 633 FPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL 692
           FPML+L YQFGRSGMD LNILLGSLVLTLLCGIHS  ALGITSS GWNSSQN TT PT L
Sbjct: 107 FPMLQLLYQFGRSGMDWLNILLGSLVLTLLCGIHSCLALGITSSSGWNSSQNLTTLPTLL 166

Query: 693 PPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           P TV  TSIETEWFHV   IGY   FVSLFPIS
Sbjct: 167 PLTVFCTSIETEWFHVLLLIGYFFLFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. ExPASy Swiss-Prot
Match: P38454 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMB PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.9e-38
Identity = 91/152 (59.87%), Postives = 108/152 (71.05%), Query Frame = 0 

Query: 573 NLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCG 632
           +LG I I  LF F P  F +N+ EDGTLELYYLS YCL KILL +L GH V+QIS VFC 
Sbjct: 115 HLGLIWICLLFSFLPERFFQNDFEDGTLELYYLSGYCLQKILLSKLYGHWVLQISGVFCS 174

Query: 633 FPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL 692
           FP+L+L YQF +S M+   I++GS + TL+CGIHS  ALGITS+ GWNS QN TT PT L
Sbjct: 175 FPVLQLLYQFDQSKMNWFTIIIGSQIFTLMCGIHSCLALGITSN-GWNSLQNLTTLPTLL 234

Query: 693 PPTVSRTSIETEWFHVPSSIGYSSPFVSLFPI 725
           P  V  TSIETEWFHV   +GY   F+  +PI
Sbjct: 235 PLIVFCTSIETEWFHVILLMGYLLLFLFFYPI 265

[Close]
BLAST of CcUC06G119360 vs. ExPASy TrEMBL
Match: A0A7D6C7C3 (Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.0e-81
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. ExPASy TrEMBL
Match: G3EU22 (Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.2e-80
Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPM KLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMFKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTLSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. ExPASy TrEMBL
Match: A0A3Q9CS08 (Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.2e-80
Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPM KLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMFKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTLSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. ExPASy TrEMBL
Match: G3EIY1 (Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.7e-79
Identity = 149/154 (96.75%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GH VIQISC+FC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS
Sbjct: 106 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPIS
Sbjct: 166 LPPTLSRTSIETEWFHVPSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. ExPASy TrEMBL
Match: A0A3S5HWV9 (Cytochrome c biogenesis B OS=Acacia ligulata OX=138025 GN=ccmB PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.4e-77
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPML+LPYQFGRSGMDRLNI LGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTS
Sbjct: 106 GFPMLQLPYQFGRSGMDRLNIPLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTS 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LPPTVSRTSIETEWFHV SSIGYSSPFVSLFPIS
Sbjct: 166 LPPTVSRTSIETEWFHVLSSIGYSSPFVSLFPIS 199

[Close]
BLAST of CcUC06G119360 vs. TAIR 10
Match: ATMG00110.1 (cytochrome C biogenesis 206 )

HSP 1 Score: 282.7 bits (722), Expect = 8.2e-76
Identity = 143/154 (92.86%), Postives = 145/154 (94.16%), Query Frame = 0 

Query: 572 SNLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFC 631
           S+LGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLS YCLPKILLLQLVGHRVIQIS VFC
Sbjct: 46  SHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSTYCLPKILLLQLVGHRVIQISRVFC 105

Query: 632 GFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTS 691
           GFPML+L YQFGRSGMDRLNI LGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPT 
Sbjct: 106 GFPMLQLSYQFGRSGMDRLNIPLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTSPTL 165

Query: 692 LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPIS 726
           LP TVSRTSIETEWFHV SSIGYSS FVSLFPIS
Sbjct: 166 LPLTVSRTSIETEWFHVLSSIGYSSLFVSLFPIS 199

The following BLAST results are available for this feature:
BLAST of CcUC06G119360 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009913630.11.0e-8099.35cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis... [more]
AEN56106.11.5e-7997.40cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c bi... [more]
YP_004849329.19.7e-7996.75cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis ... [more]
QXE45588.11.1e-7796.75cytochrome c biogenesis B [Prosopis glandulosa][more]
YP_009498132.16.9e-7796.10cytochrome c biogenesis B [Senna tora] >YP_009504845.1 CcmB [Senna occidentalis]... [more]
BLAST of CcUC06G119360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P932801.1e-5680.39Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis ... [more]
P384543.9e-3859.87Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia p... [more]
BLAST of CcUC06G119360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7D6C7C35.0e-8199.35Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1[more]
G3EU227.2e-8097.40Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=... [more]
A0A3Q9CS087.2e-8097.40Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3... [more]
G3EIY14.7e-7996.75Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1[more]
A0A3S5HWV93.4e-7796.10Cytochrome c biogenesis B OS=Acacia ligulata OX=138025 GN=ccmB PE=3 SV=1[more]
BLAST of CcUC06G119360 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00110.18.2e-7692.86cytochrome C biogenesis 206 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..696
NoneNo IPR availablePANTHERPTHR30070:SF2CYTOCHROME C BIOGENESIS Bcoord: 571..725
IPR003544Cytochrome c-type biogenesis protein CcmBPANTHERPTHR30070HEME EXPORTER PROTEIN Bcoord: 571..725

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G119360.1CcUC06G119360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017004 cytochrome complex assembly
biological_process GO:0015886 heme transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
molecular_function GO:0015232 heme transmembrane transporter activity