CcUC06G118880 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGTTTGACTTTCCTTTACTTTCTTTATCCGACCCTGGAACTAGATCTGTTGAAGGTAAGGTTTCGTCTACTAGATCAACTAAGACAGCAACAGCTTCCGTTTATGAGTGCGAGACTAAAGAGGTAATCAATAAGACCAAATTGGATCGAGATTTGTTGACCTTCGCAATAGCTACGAAATCAAGGTATAGGTGCTTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGATCAAGAAAGATATAAAGAAGAGGTCTCAACTCCACTACAAGAAGATTGGTTGCTCTCTACTTCCTCATTCTCATCCTCGGATTCTTCCTATAACCCGTGCTCAGGAATTTCATCTTCGCATACCTCGTCTCGTTCTTTCCAATCAAAGAACTTTTCCACGCTACTTTTTCAATCAAGAAAGTCCTCGGGATGCAATCGGCCATGGAAATTTTGAACGTCCACTTTGATCCCACGATCTCCTTTTTATTGAAGCCCTTCTCAATTAGAAATAAGGCCCACATTCAAAAAATCTCAATCGAAATTGGCTGGAACTTCTTCTTCATGAATAGTTCCTTGATCATGTGATCGGATCTAGTCGATCGGATTTGAATCGGAGGTCTTGAACTCGAGTTTGTGAAAGACTCTTGCCGCCCCTTTCATTTAAGCCCTTTTTTTTATTGCCCTAAAAAGAAGACCCGGCTTCTTCTTCTTTCTTTTACGAATCCGGCAAGCAAAAATCCTTTCTTCTCTTGAGTGATTGCTTGAGTTAAGCCTTCTTGACTCGTTTTGAGTCCCGATTTTCAGTCCTTGGATGATCTTTCGGGTCTGAGTACAATGGATTCCATAGGCGTTTCCCGTGCTCTTCCGAAAGAAGCATCTGGAAATGACTTGTCATGGGCTTATGCGATGAAGAATGATTTGCTCGGGAAAAAATTTTGTGCTTATGTGGATGGGTCGCTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTGCTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCATATACACCGTCACCTCTTTTGCGACCGCTAAAGATATTTGGGAAACCATAAGTCATCTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGAACATGCCTTAGCTTATGGGTAAAATCAAGAAAGAAGTTTGCTATACTATTTATTACCGAAGGCTTAGGCTTCTATGGGACCAGCTGAACATGAGGGACTCCTTTCAAAGATAGGGGCACCGATCGATTCGAATTCTAAAGGCTCTTGTCGGGAAGAATTTCATCTAACATAGAATAGCCTTCTAGAGTATAGAGTATAAAGGGGCTCTCTAAGTTTTTGATGGGCTTGAGGCCTGAGTTCGAGAATGTTAGATCCTCAATTCAACATCGAGTTACTCCACCAGACATTGAGAGAGCTGTTTCTGATGTGAGATCCGAGGAGACTCGACTTGAGCCCCAAAACTAGGTTGGGTGCAGGGGGTCGATCTTGATTTTATTACTCAGGGTGCTTCAGATCAGGTTCTTGCAGCTGAACATGCTTCGGGACATCGACCCTATGGTCAGAATCTTCAATCTGGAAGCTCCGCTGGTGCATCAAGCCAACAAGACATGTCCAAGATCATATGCCAGTAAGAAAACTAGGTATGTAAATACCTCTGCGGGTGGTGCTTTACCTGGAACAGCGTCTGAATCGACTGGCGATATCCCTGCTACTGATGATACCCCCTGA ATGGAAAGGTTTGACTTTCCTTTACTTTCTTTATCCGACCCTGGAACTAGATCTGTTGAAGGTAAGGTTTCGTCTACTAGATCAACTAAGACAGCAACAGCTTCCGTTTATGAGTGCGAGACTAAAGAGGTAATCAATAAGACCAAATTGGATCGAGATTTGTTGACCTTCGCAATAGCTACGAAATCAAGGTATAGGTGCTTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGATCAAGAAAGATATAAAGAAGAGTCCTTGGATGATCTTTCGGGTCTGAGTACAATGGATTCCATAGGCGTTTCCCGTGCTCTTCCGAAAGAAGCATCTGGAAATGACTTGTCATGGGCTTATGCGATGAAGAATGATTTGCTCGGGAAAAAATTTTGTGCTTATGTGGATGGGTCGCTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTGCTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCATATACACCGTCACCTCTTTTGCGACCGCTAAAGATATTTGGGAAACCATAAGTCATCTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGAACATGCCTTAGCTTATGGGGTGCTTCAGATCAGGTTCTTGCAGCTGAACATGCTTCGGGACATCGACCCTATGGTCAGAATCTTCAATCTGGAAGCTCCGCTGGTGCATCAAGCCAACAAGACATGTCCAAGATCATATGCCAGTAAGAAAACTAGGTATGTAAATACCTCTGCGGGTGGTGCTTTACCTGGAACAGCGTCTGAATCGACTGGCGATATCCCTGCTACTGATGATACCCCCTGA ATGGAAAGGTTTGACTTTCCTTTACTTTCTTTATCCGACCCTGGAACTAGATCTGTTGAAGGTAAGGTTTCGTCTACTAGATCAACTAAGACAGCAACAGCTTCCGTTTATGAGTGCGAGACTAAAGAGGTAATCAATAAGACCAAATTGGATCGAGATTTGTTGACCTTCGCAATAGCTACGAAATCAAGGTATAGGTGCTTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGATCAAGAAAGATATAAAGAAGAGTCCTTGGATGATCTTTCGGGTCTGAGTACAATGGATTCCATAGGCGTTTCCCGTGCTCTTCCGAAAGAAGCATCTGGAAATGACTTGTCATGGGCTTATGCGATGAAGAATGATTTGCTCGGGAAAAAATTTTGTGCTTATGTGGATGGGTCGCTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTGCTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCATATACACCGTCACCTCTTTTGCGACCGCTAAAGATATTTGGGAAACCATAAGTCATCTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGAACATGCCTTAGCTTATGGGGTGCTTCAGATCAGGTTCTTGCAGCTGAACATGCTTCGGGACATCGACCCTATGGTCAGAATCTTCAATCTGGAAGCTCCGCTGGTGCATCAAGCCAACAAGACATGTCCAAGATCATATGCCAGTAAGAAAACTAGGTATGTAAATACCTCTGCGGGTGGTGCTTTACCTGGAACAGCGTCTGAATCGACTGGCGATATCCCTGCTACTGATGATACCCCCTGA MERFDFPLLSLSDPGTRSVEGKVSSTRSTKTATASVYECETKEVINKTKLDRDLLTFAIATKSRYRCFSSPIRRPLAEREIEDQERYKEESLDDLSGLSTMDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWETISHLDSQDDSPPFYQLQHEEHALAYGVLQIRFLQLNMLRDIDPMVRIFNLEAPLVHQANKTCPRSYASKKTRYVNTSAGGALPGTASESTGDIPATDDTP Homology
BLAST of CcUC06G118880 vs. NCBI nr
Match: WP_131767158.1 (hypothetical protein [Candidatus Frankia datiscae]) HSP 1 Score: 214.5 bits (545), Expect = 1.2e-51 Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of CcUC06G118880 vs. NCBI nr
Match: TQE08519.1 (hypothetical protein C1H46_005825 [Malus baccata]) HSP 1 Score: 149.4 bits (376), Expect = 4.6e-32 Identity = 77/99 (77.78%), Postives = 78/99 (78.79%), Query Frame = 0
BLAST of CcUC06G118880 vs. NCBI nr
Match: KAF3452199.1 (hypothetical protein FNV43_RR08297 [Rhamnella rubrinervis]) HSP 1 Score: 106.7 bits (265), Expect = 3.4e-19 Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of CcUC06G118880 vs. NCBI nr
Match: KJB09756.1 (hypothetical protein B456_001G162300 [Gossypium raimondii]) HSP 1 Score: 77.0 bits (188), Expect = 2.9e-10 Identity = 64/175 (36.57%), Postives = 73/175 (41.71%), Query Frame = 0
BLAST of CcUC06G118880 vs. NCBI nr
Match: PHU02075.1 (hypothetical protein BC332_27326 [Capsicum chinense]) HSP 1 Score: 64.3 bits (155), Expect = 2.0e-06 Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of CcUC06G118880 vs. ExPASy TrEMBL
Match: A0A2N9G8J8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26859 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 8.5e-56 Identity = 111/126 (88.10%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of CcUC06G118880 vs. ExPASy TrEMBL
Match: A0A540NBV2 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_005825 PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.2e-32 Identity = 77/99 (77.78%), Postives = 78/99 (78.79%), Query Frame = 0
BLAST of CcUC06G118880 vs. ExPASy TrEMBL
Match: A0A0D2PZN2 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G162300 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10 Identity = 64/175 (36.57%), Postives = 73/175 (41.71%), Query Frame = 0
BLAST of CcUC06G118880 vs. ExPASy TrEMBL
Match: A0A2G3B6G0 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_27326 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.5e-07 Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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