CcUC06G118690 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G118690
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 13752662 .. 13754240 (+)
RNA-Seq ExpressionCcUC06G118690
SyntenyCcUC06G118690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCTAGAAACCCAAATTATAAATTAAAATAAATAAATAAATAAAGAAAGAAAGAAAATTGATTTTGAGGCAGCCATTAATTTAGTTGTTGCAATCAACACACACCCTGTTTTTAATGCTAAATTCTCTATAACTTTGCCTTTTTTTAAGCATGATTCTTATTCTCTTGTGCCGCTGCCTGCATGCTGTTTGACTGAAAGCAGCCAAAGAATCCCGGGTTTTCTTTTTTGTTTTTGGTTCTTTTTTGGAAAAAAGGTTGAATCTTGAAGTTTCCTTGAGCAAATTCTCTTTGCCCCACTTGGGAAAAATGAGATCTTCATCAAAACATTAGTGAAACTTGTAGAGAAATTTACACAATATAGACTTTAAAAACTTCTGATTTGTGTGGTTACATTTGAAAGGAACCATTTCTTTAACTATCTAAACTAATAGTCCTCTAAATTTGGGACCCAGTAAAAGGAAATTGCAAAATAAATATAATGAAAGAAAAGGGCAAAGAACTGGTTTGATTTATACATTTTCTACTGTTTGTTGTCTGTTGTCAGCTGTTTGAAACCTTGTTTCTCTATTGGCAAACCATTGGACTGTTCTTTTAGCAATTGGGTACCAAATTTGTCTCACTCTTTCTTGCTTTACATTGTTTCCCAGATCAGAAGATTCCCCAGTTTCAACTTTTCTGTTAAAATTCATATACAGATCTTCGTTACCAAATCTTGATATGCCTGTGATTTCTGAAACTGATCTTCTTGCATCTGGGCTTGTAATTCTTGTTGTTTGACTGGGATTTGCAGCAGATTGTGATGTAGAAGGGAATCCCAGAACTGAGTTGCTTTGGTTTATTGTATTGAGTTTGCTCTCAAATGATCTCTTTATTTCCATCTCCTCCTTGATCTTCAAAATTTCTTCAATTTGTATTGATCTTGGCTGCGTTGACTGTTCTATATCGGTTTCCAAGGAAGTGAATCTACTGCTTGAAATGGCATCCATCATCTCTTTGTTCAAGAACATCAGGTCTGACGAACTTACGTTGCTCCATCGATTCATGAAAACAAAATCGGATACGATAATTTTGTGGTTGTGTCTGTGTAAGTTCTTCATGTCCTCATCTCCATCACCACAAGCCTTTTGTATCAACATTTCCTCTTCCTTATCACTCCTTAAGATCTTTCTGAAGCTTCTTCCGATGCTGAATCTAGAAGAGCCATGGAGTATTTGTCGTTGTTCTTCTTCTTCTCTTTGTACAAAGAGCTCTATGTTTGAGTCTTGTTTCAGCTCTGATAAGTTGCTCAATAAGAACCTCATACTGTTTGAAGTAGCAAGGATCTTCAAGTCCTCAGAGCCAACACTTTGCCTGCAAAGAGGACAGCTAGCATGTTTCTCGAGCCAATGATCAATGCAGTTAATATGAAATGCATGTTTGCACTTCGGCAACAACCGGAGAATTTCGATGTCTTCAAATTTCGAAAGACAGACTGCACATTCCAGCCCTTCTTTGGACCCTTTCAATCTGGAGAATCTAAAGAATGGAAGAGACTCGATCACCGTCTTATCGAGTCCAGAAAGCCGAGAACTTGA

mRNA sequence

ATGAATGCAGATTGTGATGTAGAAGGGAATCCCAGAACTGAGTTGCTTTGGTTTATTGTATTGAGTTTGCTCTCAAATGATCTCTTTATTTCCATCTCCTCCTTGATCTTCAAAATTTCTTCAATTTGTATTGATCTTGGCTGCGTTGACTGTTCTATATCGGTTTCCAAGGAAGTGAATCTACTGCTTGAAATGGCATCCATCATCTCTTTGTTCAAGAACATCAGGTCTGACGAACTTACGTTGCTCCATCGATTCATGAAAACAAAATCGGATACGATAATTTTGTGGTTGTGTCTGTGTAAGTTCTTCATGTCCTCATCTCCATCACCACAAGCCTTTTGTATCAACATTTCCTCTTCCTTATCACTCCTTAAGATCTTTCTGAAGCTTCTTCCGATGCTGAATCTAGAAGAGCCATGGAGTATTTGTCGTTGTTCTTCTTCTTCTCTTTGTACAAAGAGCTCTATGTTTGAGTCTTGTTTCAGCTCTGATAAGTTGCTCAATAAGAACCTCATACTTAGCAAGGATCTTCAAGTCCTCAGAGCCAACACTTTGCCTGCAAAGAGGACAGCTAGCATGTTTCTCGAGCCAATGATCAATGCAGTTAATATGAAATGCATGTTTGCACTTCGGCAACAACCGGAGAATTTCGATGTCTTCAAATTTCGAAAGACAGACTGCACATTCCAGCCCTTCTTTGGACCCTTTCAATCTGGAGAATCTAAAGAATGGAAGAGACTCGATCACCGTCTTATCGAGTCCAGAAAGCCGAGAACTTGA

Coding sequence (CDS)

ATGAATGCAGATTGTGATGTAGAAGGGAATCCCAGAACTGAGTTGCTTTGGTTTATTGTATTGAGTTTGCTCTCAAATGATCTCTTTATTTCCATCTCCTCCTTGATCTTCAAAATTTCTTCAATTTGTATTGATCTTGGCTGCGTTGACTGTTCTATATCGGTTTCCAAGGAAGTGAATCTACTGCTTGAAATGGCATCCATCATCTCTTTGTTCAAGAACATCAGGTCTGACGAACTTACGTTGCTCCATCGATTCATGAAAACAAAATCGGATACGATAATTTTGTGGTTGTGTCTGTGTAAGTTCTTCATGTCCTCATCTCCATCACCACAAGCCTTTTGTATCAACATTTCCTCTTCCTTATCACTCCTTAAGATCTTTCTGAAGCTTCTTCCGATGCTGAATCTAGAAGAGCCATGGAGTATTTGTCGTTGTTCTTCTTCTTCTCTTTGTACAAAGAGCTCTATGTTTGAGTCTTGTTTCAGCTCTGATAAGTTGCTCAATAAGAACCTCATACTTAGCAAGGATCTTCAAGTCCTCAGAGCCAACACTTTGCCTGCAAAGAGGACAGCTAGCATGTTTCTCGAGCCAATGATCAATGCAGTTAATATGAAATGCATGTTTGCACTTCGGCAACAACCGGAGAATTTCGATGTCTTCAAATTTCGAAAGACAGACTGCACATTCCAGCCCTTCTTTGGACCCTTTCAATCTGGAGAATCTAAAGAATGGAAGAGACTCGATCACCGTCTTATCGAGTCCAGAAAGCCGAGAACTTGA

Protein sequence

MNADCDVEGNPRTELLWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSKEVNLLLEMASIISLFKNIRSDELTLLHRFMKTKSDTIILWLCLCKFFMSSSPSPQAFCINISSSLSLLKIFLKLLPMLNLEEPWSICRCSSSSLCTKSSMFESCFSSDKLLNKNLILSKDLQVLRANTLPAKRTASMFLEPMINAVNMKCMFALRQQPENFDVFKFRKTDCTFQPFFGPFQSGESKEWKRLDHRLIESRKPRT
Homology
[Close]
BLAST of CcUC06G118690 vs. NCBI nr
Match: ONH98032.1 (hypothetical protein PRUPE_7G224400 [Prunus persica])

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-13
Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 0 

Query: 6   DVEGNPRTE--LLWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSKEVNLLL 65
           DVEG    E  L  FIVL+L SN+LFI ISSLIF +SS  +     +CS+    E NLLL
Sbjct: 4   DVEGKIGFEAVLFLFIVLTLFSNNLFIPISSLIFIMSSFPVVSAVENCSLIKCAEENLLL 63

Query: 66  EMASIISLFKNIRSDELTLLHRFMKTKSDTIILWLCLCKFF 105
           ++   IS F+N+RS+ELTLLH F+ +KSDT IL LCLC+ F
Sbjct: 64  DIVLSISEFRNMRSEELTLLHLFLNSKSDTTILCLCLCRIF 104

[Close]
BLAST of CcUC06G118690 vs. NCBI nr
Match: POO00863.1 (hypothetical protein TorRG33x02_034940, partial [Trema orientale])

HSP 1 Score: 73.2 bits (178), Expect = 3.8e-09
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 16  LWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSK-EVNLLLEMASIISLFKN 75
           L  IV +L SND  ISISSLIF ISS        D S   S  E NLLL+M+  IS  +N
Sbjct: 33  LLLIVPTLFSNDRLISISSLIFTISSFSSVFTVRDTSWFESMGETNLLLDMSFSISELRN 92

Query: 76  IRSDELTLLHRFMKTKSDTIILWLCL 101
           +RS+ELTLLH F+KTKS+T ILWLCL
Sbjct: 93  MRSEELTLLHLFLKTKSETTILWLCL 118

[Close]
BLAST of CcUC06G118690 vs. NCBI nr
Match: PON62261.1 (hypothetical protein PanWU01x14_139610 [Parasponia andersonii])

HSP 1 Score: 73.2 bits (178), Expect = 3.8e-09
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 16  LWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSK-EVNLLLEMASIISLFKN 75
           L  IV +L SND  ISISSLIF ISS        D S   S  E NLLL+M+  IS  +N
Sbjct: 33  LLLIVPTLFSNDRLISISSLIFTISSFSSVFTVRDTSWFESMGETNLLLDMSFSISELRN 92

Query: 76  IRSDELTLLHRFMKTKSDTIILWLCL 101
           +RS+ELTLLH F+KTKS+T ILWLCL
Sbjct: 93  MRSEELTLLHLFLKTKSETAILWLCL 118

[Close]
BLAST of CcUC06G118690 vs. ExPASy TrEMBL
Match: A0A251NFD6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G224400 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.4e-14
Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 0 

Query: 6   DVEGNPRTE--LLWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSKEVNLLL 65
           DVEG    E  L  FIVL+L SN+LFI ISSLIF +SS  +     +CS+    E NLLL
Sbjct: 4   DVEGKIGFEAVLFLFIVLTLFSNNLFIPISSLIFIMSSFPVVSAVENCSLIKCAEENLLL 63

Query: 66  EMASIISLFKNIRSDELTLLHRFMKTKSDTIILWLCLCKFF 105
           ++   IS F+N+RS+ELTLLH F+ +KSDT IL LCLC+ F
Sbjct: 64  DIVLSISEFRNMRSEELTLLHLFLNSKSDTTILCLCLCRIF 104

[Close]
BLAST of CcUC06G118690 vs. ExPASy TrEMBL
Match: A0A2P5CMJ7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_139610 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 16  LWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSK-EVNLLLEMASIISLFKN 75
           L  IV +L SND  ISISSLIF ISS        D S   S  E NLLL+M+  IS  +N
Sbjct: 33  LLLIVPTLFSNDRLISISSLIFTISSFSSVFTVRDTSWFESMGETNLLLDMSFSISELRN 92

Query: 76  IRSDELTLLHRFMKTKSDTIILWLCL 101
           +RS+ELTLLH F+KTKS+T ILWLCL
Sbjct: 93  MRSEELTLLHLFLKTKSETAILWLCL 118

[Close]
BLAST of CcUC06G118690 vs. ExPASy TrEMBL
Match: A0A2P5FST9 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_034940 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 16  LWFIVLSLLSNDLFISISSLIFKISSICIDLGCVDCSISVSK-EVNLLLEMASIISLFKN 75
           L  IV +L SND  ISISSLIF ISS        D S   S  E NLLL+M+  IS  +N
Sbjct: 33  LLLIVPTLFSNDRLISISSLIFTISSFSSVFTVRDTSWFESMGETNLLLDMSFSISELRN 92

Query: 76  IRSDELTLLHRFMKTKSDTIILWLCL 101
           +RS+ELTLLH F+KTKS+T ILWLCL
Sbjct: 93  MRSEELTLLHLFLKTKSETTILWLCL 118

The following BLAST results are available for this feature:
BLAST of CcUC06G118690 vs. NCBI nr
Match NameE-valueIdentityDescription
ONH98032.11.9e-1354.46hypothetical protein PRUPE_7G224400 [Prunus persica][more]
POO00863.13.8e-0958.14hypothetical protein TorRG33x02_034940, partial [Trema orientale][more]
PON62261.13.8e-0958.14hypothetical protein PanWU01x14_139610 [Parasponia andersonii][more]
BLAST of CcUC06G118690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC06G118690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A251NFD69.4e-1454.46Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G224400 PE=4 SV=1[more]
A0A2P5CMJ71.8e-0958.14Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_139610 PE... [more]
A0A2P5FST91.8e-0958.14Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_034... [more]
BLAST of CcUC06G118690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G118690.1CcUC06G118690.1mRNA