CcUC06G117180 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G117180
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	S-protein homolog
Location	CicolChr06: 9403000 .. 9406473 (-)
RNA-Seq Expression	CcUC06G117180
Synteny	CcUC06G117180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTCAGATGTTTGAATCTCTCTACTCCTAAATTATTCCTAAATTATTGTACCTAGAAGAAAAAAAACAATAAACTGAGAATACGTTACCAAAACGGCCCATCCTCGTCATATATGGCAACACAACTCAAACAATGAAACCTTGTCCTTGTGCATGAATTTTAAATCTTACGATACAATTACACTCCATGGCAAGTATAAAAGTGAGACAAACCAAGCACAAGTATTCTCCAAATCAAGTCTTAAGTCTCTCTTTCTTTTATTATTTTGACAGAATGGGCTCATTTTCAACGTTGGCACTATCCCTGATTATATCATTGTTTTTTGCTACTCCATTCACTATCGAAGGAAAACCCTTCCAATCCCCACCGGTTACAGTCAACATAAAAAATACTCTAAAAGGTAATTATCAACTCACTGTTCACTGCAAATCAGGCGATGATGACTTGGGAGTTCACCAGCTCTCACCTTTGGCTAGTTATAGCTTTACTTTTCGACCAAACTTCTGGGGTAGAACCTTGTTTTTCTGTGGCTTCCAATGGCCTGGTTCATCGTTACATTACTTCGATATCTACAAGGATATAAGAGATAGACAACGCTGTAATGATACTTTGTGTTTGTGGAATGTGGATGAACATAATATTTGCTTGTTCAACTATATCACCAAAATGTATGATCTTTGCTATACATGGTAGCCTAATTAACTATAAAAAATCGATATGTCCATAAATTGGAAAGTTCGATTTTGATATTAATAATAAATCTATATTTTAAATATGTTGGTTGTATGTATTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTGACATGTCGACATTTTCCTCAATATTTTTACATTCCATGAGTTCAACATTCACACGAGAGATTTCGTTAAAAAAAATCATAAAGTCTAAAAAATTAAACATCAAAGGTTACTAATGTGATTATTATATAATTAACAAAAAAAAATTTAACTTGTTTTACTCAAAACAATTTAAATTTGTTTAGAAGAGTACAATGTGAGAAACATACAATGTAGAAATTTAGAGCAACTGAGGGAAAATTGTAAGTTTCTAGAAAACTGTGATATGGTGGATCAAAGGCAAAAAATGGTAATAATGTCTTGAATGTTTGCTTATTCTTTTCCAACCAAGGGCACAGTGGCTATGGAGAAATTAAACTGAATGATACTTCTCTGAAAATTTTAATTTGTGGACATAAAGCTTCACAATGATATTCTATTATGCATGTTGGTCGATGGAAAATTTGTTAGAATATTGCTTATTTACTCCGTAACCAATTCACTGCTTGCCAATGAAATTTCTTCAAATCGGACATGTACTCACTTTTAGGGTGTGTTTGGAATACATTTTTGTTGGAATACTTTGAATCTTCAACCTAATTAGAATTGGTATTTGACATATTTAATTATTTAAATATTTTCCTTTTGTACTAGGGTGTAGAGAAGTGCACTATATAAACTCTCTAGCCCTAAGGCATTATGCAATTTTGTGTGACATTTTGTAATCTTGTAATATTCTCCCTAATAAAGTTGTTCTCCCTCTATCCCGTGGACGTAGCTAACATATTGTTAGTGAACCACGTAAATTTGTGTGTTGATATTCTATATTTTTACTTTCTTTTGTATTCTTTAATTGTCGATTACGTAACAATTTTCAAGTGTTTAATTTAAAAAATAAGTCATTTTGAAAAAAAGCTGGAGGTTTTGACAATCATTTAAAATAGATTTTGAGGTGTATTTTAAATAGTTTCTACCAAAAAAAAGTTTAAAAAAAAATGAATTTTCTGAAAAACATTTTTTTCTCGAGTCAATCCAACCGAATCCCTAATCTATTTGCCAAAGTCAGGTCTTGTGCAAACTATAAAATACATTAACCTACCAACTGCACTTGCATATGGAATCTATATTCAGTTTTTTACTTGGTTTGAGGTGAGTGGCCCAAGGTTAACTTGAAATGATATGCTAAGGATGTGGAGACAGGCTTACAATCAATCATTCTAAATTTTGTAAGCATTTTTGGAACAATATGAAGTAAGGGATATGGAGAAGACCAGTCTGGCTTTCCTCTATAGCTTTATTAGTAAAAGAGTGAGCCAAAAGCATTTCGACCTCGATGGGAGTGAATAAAGGAGATTTCCTCTTGCTTAAAGATTATAATCTCATGCACCAAGAAAGCCATTTCAGTGAAATCAATTGATTGGTTGTTAACGAGCTTGGTAAAGCATGCTCCCTAAAGCCTTAAATTACAAATATTTGAAGGTCTTATTGCATGCTTTTTAGCAAATAGCTGTTTAAATCTCAGAAATGAGCAAGTAGTAAAAAACTAACGCTATTGCATCGGTGTGTTGATAATTCATGAAACTTGCTACATTTAATGGTTACCACGTGAAATTCAGAGTTAAGCAGGTAAAAAGAAATATCTATAGCTTGGTGGATTGTATGCAACATGTTAGGGTGGGATGTCTGCTGCCTCATGGGAAGACGTTGGGAATCACTTTTCTGAAAAAGCCTTCTGTGCTTGAGCAAATTCATACTCTACAAGTAGTGAGCTGCACCATCTGTTTTGATTGTATAGTGCTGCCTTCATCAGGTCATCTCCCCTACCACGTGTGTGACATCCCAAATTTTCAAGTAAATTTGAAGTAATTATCTCAATTAATCGGGCGTATTTTGCAATTGTGAGGTTAAAATTGAATTATTTTGGCATGATAATTCAATTTAAGTTTTTGATAAAAGATTTATGAATTTAAGAATTTGAAATCATGACAGAAGGAAAAGGAAATGATTATATATTTTAATTATTTAGGGAGGTTAAAGAAAGAGGAATATATATATATATGGAAAAAACTTGGGTACAGTTGGGGCCACACCCATCTCTTGTGCAGCCCCAGTTGCACTCAATGAAATGGTGACACGTGTCATTATCTTTAATATTTTTAGGTGTCAGGTAAGTTCTTTAGGTCTTGATTTATGGTTTGTTTAGTTTTGGCTTAAGCTTTGGGTTACTCATCGTGTTTTGAGTTTAGATTCAAAATCTTGAGAGGTTCCAAGCTGCTGTCTAGAAAGTTCAAGATCGATTTCGACTAGGTTTTGGTATGTATTTCAGGTTTCTTGGGCATTTGAAGGAGCTGTAAATTGGGAATTTGCCTAAATTATTGTTTTAATCTTGATTTATGGAGGTTGGATTGGGGCTTGAAGGATTTTAGGGGCTATCCGGTGAAATAA

mRNA sequence

ATGAGAATGGGCTCATTTTCAACGTTGGCACTATCCCTGATTATATCATTGTTTTTTGCTACTCCATTCACTATCGAAGGAAAACCCTTCCAATCCCCACCGGTTACAGTCAACATAAAAAATACTCTAAAAGGTAATTATCAACTCACTGTTCACTGCAAATCAGGCGATGATGACTTGGGAGTTCACCAGCTCTCACCTTTGGCTAGTTATAGCTTTACTTTTCGACCAAACTTCTGGGGTAGAACCTTGTTTTTCTGTGGCTTCCAATGGCCTGGTTCATCGTTACATTACTTCGATATCTACAAGGATATAAGAGATAGACAACGCTGTAATGATACTTTGTGTTTGTGGAATGTGGATGAACATAATATTTGCTTGTTCAACTATATCACCAAAATGTTGGATTGGGGCTTGAAGGATTTTAGGGGCTATCCGGTGAAATAA

Coding sequence (CDS)

ATGAGAATGGGCTCATTTTCAACGTTGGCACTATCCCTGATTATATCATTGTTTTTTGCTACTCCATTCACTATCGAAGGAAAACCCTTCCAATCCCCACCGGTTACAGTCAACATAAAAAATACTCTAAAAGGTAATTATCAACTCACTGTTCACTGCAAATCAGGCGATGATGACTTGGGAGTTCACCAGCTCTCACCTTTGGCTAGTTATAGCTTTACTTTTCGACCAAACTTCTGGGGTAGAACCTTGTTTTTCTGTGGCTTCCAATGGCCTGGTTCATCGTTACATTACTTCGATATCTACAAGGATATAAGAGATAGACAACGCTGTAATGATACTTTGTGTTTGTGGAATGTGGATGAACATAATATTTGCTTGTTCAACTATATCACCAAAATGTTGGATTGGGGCTTGAAGGATTTTAGGGGCTATCCGGTGAAATAA

Protein sequence

MRMGSFSTLALSLIISLFFATPFTIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFNYITKMLDWGLKDFRGYPVK

Homology

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BLAST of CcUC06G117180 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 5.6e-50
Identity = 98/136 (72.06%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 2   RMGSFSTLALSLIISLFFATPFTIEGKPFQSPPVTVNIKNTLKG-NYQLTVHCKSGDDDL 61
           +M SFST  LSL ISL FAT FTIEGKPFQSPPVTVNI N LK  N QLT+HCKSGDDDL
Sbjct: 41  KMSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDL 100

Query: 62  GVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNV 121
           GVHQLS LASY+F FRPNFWG TLF+C F W GSS HYF+IY+D+RDR +CNDTLCLW V
Sbjct: 101 GVHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSS-HYFNIYQDLRDRAKCNDTLCLWIV 160

Query: 122 DEHNICLFNYITKMLD 137
            E  +C+F+Y T   D
Sbjct: 161 GEQGLCMFDYKTNAYD 175

[Close]

BLAST of CcUC06G117180 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-39
Identity = 80/115 (69.57%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 23  FTIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGR 82
           FTIEGKPFQ+P VTVNI N L    QLTVHCKSGDDDLG+HQL PL  Y+FTFRPNF G 
Sbjct: 2   FTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGT 61

Query: 83  TLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFNYITKMLDW 138
           TLF+C FQWPG S H FDIYKD RDR RCN  LCLW V E  +C+F+Y+TK  D+
Sbjct: 62  TLFYCTFQWPGWS-HSFDIYKDSRDRDRCNG-LCLWIVGEQGVCMFHYVTKKYDF 114

[Close]

BLAST of CcUC06G117180 vs. NCBI nr
Match: XP_023522352.1 (S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-37
Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 0


Query: 2   RMGSFSTLALSLIISLFFATPF-TIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDL 61
           +M SFSTLA +L++SLFF T F TI+G  F+ PP+TVNI N LK + QL V CKS DDDL
Sbjct: 29  KMNSFSTLAFALLMSLFFTTLFTTIDGSIFKDPPMTVNITNVLKSHNQLAVRCKSSDDDL 88

Query: 62  GVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNV 121
            +HQL PL  Y+FTF+PNFWG T F+C F+W G S HYFDIYKD RDR +CN+TLCLW V
Sbjct: 89  RIHQLPPLGGYAFTFQPNFWGSTQFYCTFEWSGFS-HYFDIYKDNRDRTKCNNTLCLWIV 148

Query: 122 DE 123
            E
Sbjct: 149 GE 149

[Close]

BLAST of CcUC06G117180 vs. NCBI nr
Match: XP_022933359.1 (S-protein homolog 5-like, partial [Cucurbita moschata])

HSP 1 Score: 157.9 bits (398), Expect = 6.7e-35
Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 15  ISLFFATPF-TIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSF 74
           +SLFF T F TI+G  F+ PP+TVN  N LK + QLT+HCKSGDDDLG+HQL  L  Y+F
Sbjct: 1   MSLFFTTLFTTIDGSIFKDPPITVNTTNVLKSHNQLTIHCKSGDDDLGIHQLPFLGGYAF 60

Query: 75  TFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDE 123
           TFRPNFWG T F+C FQWPG S  YFDIYKD RDR +CN TLCLW V E
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFS-QYFDIYKDNRDRMKCNKTLCLWIVGE 108

[Close]

BLAST of CcUC06G117180 vs. NCBI nr
Match: XP_022933325.1 (S-protein homolog 5-like, partial [Cucurbita moschata])

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-34
Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 15  ISLFFATPF-TIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSF 74
           +SLFF T F TI+G  F+ PP+TVNI N LK + QLT+HCKSGDDDLG+HQL  L  Y+F
Sbjct: 1   MSLFFTTLFTTIDGSIFKDPPITVNITNVLKSHNQLTIHCKSGDDDLGIHQLPFLGGYAF 60

Query: 75  TFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDE 123
           TFRPNFWG T F+C FQW G S  YFDIYKD RDR +CN TLCLW V E
Sbjct: 61  TFRPNFWGSTQFYCTFQWHGFS-QYFDIYKDNRDRMKCNKTLCLWIVGE 108

[Close]

BLAST of CcUC06G117180 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.7e-21
Identity = 51/110 (46.36%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 30  FQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGF 89
           F +   TV I N L     L  HCKS DDDLG   L P  S+SF+F   F+GRTL+FC F
Sbjct: 43  FPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSF 102

Query: 90  QWPGSSLHYFDIYKDIRDR---QRCNDTLCLWNVDEHNICLFNYITKMLD 137
            WP  S H FDIYKD RD     +C    C+W +  +  C FN  TK  D
Sbjct: 103 SWPNES-HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFD 151

[Close]

BLAST of CcUC06G117180 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-16
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 37  VNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSL 96
           V I N L     L +HCKS DDDLG+  L+P  S+SF FR +  G TLF+C F WPG S 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 97  HYFDIYKDIRD--RQRCNDTLCLWNVDEHNICLFN 130
             FDIY D RD  R   +   C+W++     C+F+
Sbjct: 99  R-FDIYDDDRDGVRSHISCINCIWDISIQGPCMFS 132

[Close]

BLAST of CcUC06G117180 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.2e-16
Identity = 49/128 (38.28%), Postives = 59/128 (46.09%), Query Frame = 0


Query: 14  IISLFFATPFTIEGKPFQSPP----VTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLA 73
           I+  FF   F + G  +   P     TV     L G   LT+HCKS  DDLG+H +    
Sbjct: 6   IVCFFF---FLLFGSGYGGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQ 65

Query: 74  SYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFN 133
            Y F F+PN W  TLFFC FQW  S    FDIY   RD+  C+D  C W +     C   
Sbjct: 66  EYHFKFQPNLWKSTLFFCSFQW-DSQFKSFDIYDAQRDQGICDD--CQWEIKPDGPCRLG 125

Query: 134 YITKMLDW 138
              K   W
Sbjct: 126 KKAKCFPW 127

[Close]

BLAST of CcUC06G117180 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 45/98 (45.92%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 37  VNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFW-GRTLFFCGFQWPGSS 96
           V I N L     L +HCKS DDDLG+  L+P  S+SF FRP+   G TLFFC F WPG S
Sbjct: 40  VTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQS 99

Query: 97  LHYFDIYKDIRD--RQRCNDTLCLWNVDEHNICLFNYI 132
             +F+IY D RD  R       C+W++ ++  C F+ I
Sbjct: 100 -KWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEI 136

[Close]

BLAST of CcUC06G117180 vs. ExPASy Swiss-Prot
Match: Q3E9W6 (S-protein homolog 20 OS=Arabidopsis thaliana OX=3702 GN=SPH20 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-15
Identity = 47/128 (36.72%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 10  ALSLIISLFFATPFTIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLA 69
           A  +I+S+ F   F   G       V V+I N +  N QL +HCKS D DLG   L+P  
Sbjct: 6   AFHIILSVTFMV-FLFGGLCEAGVVVNVDIINDIGPNVQLGLHCKSKDKDLGPQSLAPQQ 65

Query: 70  SYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFN 129
            + F    +FWG TLFFC F+W   S  +FDI    RDR  C +  C+W++     C   
Sbjct: 66  HWGFRKTLDFWGVTLFFCHFEWENQS-KWFDILVAGRDRNTCAEHPCVWSIRPSGPCRLT 125

Query: 130 YITKMLDW 138
              K   W
Sbjct: 126 GKEKCFPW 131

[Close]

BLAST of CcUC06G117180 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.7e-50
Identity = 98/136 (72.06%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 2   RMGSFSTLALSLIISLFFATPFTIEGKPFQSPPVTVNIKNTLKG-NYQLTVHCKSGDDDL 61
           +M SFST  LSL ISL FAT FTIEGKPFQSPPVTVNI N LK  N QLT+HCKSGDDDL
Sbjct: 41  KMSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDL 100

Query: 62  GVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNV 121
           GVHQLS LASY+F FRPNFWG TLF+C F W GSS HYF+IY+D+RDR +CNDTLCLW V
Sbjct: 101 GVHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSS-HYFNIYQDLRDRAKCNDTLCLWIV 160

Query: 122 DEHNICLFNYITKMLD 137
            E  +C+F+Y T   D
Sbjct: 161 GEQGLCMFDYKTNAYD 175

[Close]

BLAST of CcUC06G117180 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.7e-39
Identity = 80/115 (69.57%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 23  FTIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGR 82
           FTIEGKPFQ+P VTVNI N L    QLTVHCKSGDDDLG+HQL PL  Y+FTFRPNF G 
Sbjct: 2   FTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGT 61

Query: 83  TLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFNYITKMLDW 138
           TLF+C FQWPG S H FDIYKD RDR RCN  LCLW V E  +C+F+Y+TK  D+
Sbjct: 62  TLFYCTFQWPGWS-HSFDIYKDSRDRDRCNG-LCLWIVGEQGVCMFHYVTKKYDF 114

[Close]

BLAST of CcUC06G117180 vs. ExPASy TrEMBL
Match: A0A6J1EZJ3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440716 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.2e-35
Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 15  ISLFFATPF-TIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSF 74
           +SLFF T F TI+G  F+ PP+TVN  N LK + QLT+HCKSGDDDLG+HQL  L  Y+F
Sbjct: 1   MSLFFTTLFTTIDGSIFKDPPITVNTTNVLKSHNQLTIHCKSGDDDLGIHQLPFLGGYAF 60

Query: 75  TFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDE 123
           TFRPNFWG T F+C FQWPG S  YFDIYKD RDR +CN TLCLW V E
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFS-QYFDIYKDNRDRMKCNKTLCLWIVGE 108

[Close]

BLAST of CcUC06G117180 vs. ExPASy TrEMBL
Match: A0A6J1F4K2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440553 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.4e-35
Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 15  ISLFFATPF-TIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSF 74
           +SLFF T F TI+G  F+ PP+TVNI N LK + QLT+HCKSGDDDLG+HQL  L  Y+F
Sbjct: 1   MSLFFTTLFTTIDGSIFKDPPITVNITNVLKSHNQLTIHCKSGDDDLGIHQLPFLGGYAF 60

Query: 75  TFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDE 123
           TFRPNFWG T F+C FQW G S  YFDIYKD RDR +CN TLCLW V E
Sbjct: 61  TFRPNFWGSTQFYCTFQWHGFS-QYFDIYKDNRDRMKCNKTLCLWIVGE 108

[Close]

BLAST of CcUC06G117180 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 35  VTVNIKNTLKG-NYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPG 94
           +TVNI N + G N QLTVHCKSGDDDLGVH+L  L SY+FTFRPNFWG TLF+C FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQW-S 60

Query: 95  SSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFNYITKMLDW 138
           S LHYFDIYKD RD  RCN TLCLW + E  IC+FNY TK  D+
Sbjct: 61  SWLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDY 103

[Close]

BLAST of CcUC06G117180 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.3 bits (251), Expect = 6.9e-22
Identity = 51/110 (46.36%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 30  FQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGF 89
           F +   TV I N L     L  HCKS DDDLG   L P  S+SF+F   F+GRTL+FC F
Sbjct: 43  FPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSF 102

Query: 90  QWPGSSLHYFDIYKDIRDR---QRCNDTLCLWNVDEHNICLFNYITKMLD 137
            WP  S H FDIYKD RD     +C    C+W +  +  C FN  TK  D
Sbjct: 103 SWPNES-HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFD 151

[Close]

BLAST of CcUC06G117180 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 91.7 bits (226), Expect = 5.5e-19
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 30  FQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGF 89
           F +P  TV I N L G+  L  HCKS +DDLG   ++   ++SF FRP+ +G TLFFCGF
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 90  QWPGSSLHYFDIYKDIRDRQ--RCNDTLCLWNVDEHNICLFNYITKMLD 137
            W    LH+FDIYK  RDR+        C W + +   C  N  + M D
Sbjct: 83  IW-DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFD 130

[Close]

BLAST of CcUC06G117180 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18
Identity = 52/136 (38.24%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 3   MGSFSTLALSLIISLFFATPFTIEGKPFQSPPVTVNIKNTLKGNYQLTVHCKSGDDDLGV 62
           MGS  T  L  ++ +F +   +           +V I N L G   L  HCKS +DDLG 
Sbjct: 1   MGSLETCLLFFVMVMFMSAIMS-------RASTSVVIYNDLGGGLPLRHHCKSREDDLGY 60

Query: 63  HQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDR--QRCNDTLCLWNV 122
             L+P  S+SF F P+ +GRTLF+C F W G+  H FDIYK  RD+  Q      C W +
Sbjct: 61  QSLAPGRSWSFGFTPDIFGRTLFYCRFSW-GAESHIFDIYKQSRDKEFQEFGCKKCEWKI 120

Query: 123 DEHNICLFNYITKMLD 137
            ++  C F   T M D
Sbjct: 121 RKNGPCKFYKKTGMFD 128

[Close]

BLAST of CcUC06G117180 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 37  VNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLASYSFTFRPNFWGRTLFFCGFQWPGSSL 96
           V I N L     L +HCKS DDDLG+  L+P  S+SF FR +  G TLF+C F WPG S 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 97  HYFDIYKDIRD--RQRCNDTLCLWNVDEHNICLFN 130
             FDIY D RD  R   +   C+W++     C+F+
Sbjct: 99  R-FDIYDDDRDGVRSHISCINCIWDISIQGPCMFS 132

[Close]

BLAST of CcUC06G117180 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17
Identity = 49/128 (38.28%), Postives = 59/128 (46.09%), Query Frame = 0


Query: 14  IISLFFATPFTIEGKPFQSPP----VTVNIKNTLKGNYQLTVHCKSGDDDLGVHQLSPLA 73
           I+  FF   F + G  +   P     TV     L G   LT+HCKS  DDLG+H +    
Sbjct: 6   IVCFFF---FLLFGSGYGGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQ 65

Query: 74  SYSFTFRPNFWGRTLFFCGFQWPGSSLHYFDIYKDIRDRQRCNDTLCLWNVDEHNICLFN 133
            Y F F+PN W  TLFFC FQW  S    FDIY   RD+  C+D  C W +     C   
Sbjct: 66  EYHFKFQPNLWKSTLFFCSFQW-DSQFKSFDIYDAQRDQGICDD--CQWEIKPDGPCRLG 125

Query: 134 YITKMLDW 138
              K   W
Sbjct: 126 KKAKCFPW 127

The following BLAST results are available for this feature:

BLAST of CcUC06G117180 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61530.1	5.6e-50	72.06	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_008465559.1	3.4e-39	69.57	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
XP_023522352.1	2.4e-37	63.93	S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_022933359.1	6.7e-35	66.97	S-protein homolog 5-like, partial [Cucurbita moschata]	[more]
XP_022933325.1	1.9e-34	66.97	S-protein homolog 5-like, partial [Cucurbita moschata]	[more]

BLAST of CcUC06G117180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	9.7e-21	46.36	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	2.5e-16	45.26	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
O23020	7.2e-16	38.28	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	2.1e-15	45.92	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
Q3E9W6	6.1e-15	36.72	S-protein homolog 20 OS=Arabidopsis thaliana OX=3702 GN=SPH20 PE=2 SV=1	[more]

BLAST of CcUC06G117180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI28	2.7e-50	72.06	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A1S3CP53	1.7e-39	69.57	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A6J1EZJ3	3.2e-35	66.97	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440716 PE=3 SV=1	[more]
A0A6J1F4K2	9.4e-35	66.97	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440553 PE=3 SV=1	[more]
A0A1S3CDK4	1.2e-34	69.23	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1	[more]

BLAST of CcUC06G117180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	6.9e-22	46.36	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	5.5e-19	43.12	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	4.6e-18	38.24	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	1.8e-17	45.26	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	5.1e-17	38.28	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 36..133 e-value: 2.8E-29 score: 101.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 11..135
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 11..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G117180.1	CcUC06G117180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane