CcUC06G110240 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G110240
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Natterin-3 like
Location	CicolChr06: 785885 .. 786337 (-)
RNA-Seq Expression	CcUC06G110240
Synteny	CcUC06G110240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAACTTCCCAAGTTTGCAGCTCTGAAATCAAAGTACAACAACAAATACTTGCGATATGTGAATGAAACGTCTTCCCCAGTCCGTACATTTCTACAATACTCAGGCAAGGAGATTCTTACTCCATATACAAAGTTGGAGTTGGAGCAAGCTCAATCTGACCCATCTTTATTCCATATAAAATGTTGTTACAACAACAAATATTGGGTTAGTTCCGTTTCAGACCATCATTTTATTGTTGCAACGGCTGACCAAAAACAAGAAGACAAATCCAAATGGACATGCACATTGTTTCGTCCAACTTATGACAACAATCATCAATCATTTCGATTCTCTCGTGTGTTTCTTGGTTTAATTGTGGTGTTGTCGAAGGCTGCTGCCCCTTATGGAGAATGCTTACATGCACAATCATCAAATCCTGCTACAGACTTTTGTGATCTCAACATATAG

mRNA sequence

ATGGTGCAACTTCCCAAGTTTGCAGCTCTGAAATCAAAGTACAACAACAAATACTTGCGATATGTGAATGAAACGTCTTCCCCAGTCCGTACATTTCTACAATACTCAGGCAAGGAGATTCTTACTCCATATACAAAGTTGGAGTTGGAGCAAGCTCAATCTGACCCATCTTTATTCCATATAAAATGTTGTTACAACAACAAATATTGGGTTAGTTCCGTTTCAGACCATCATTTTATTGTTGCAACGGCTGACCAAAAACAAGAAGACAAATCCAAATGGACATGCACATTGTTTCGTCCAACTTATGACAACAATCATCAATCATTTCGATTCTCTCGTGTGTTTCTTGGTTTAATTGTGGTGTTGTCGAAGGCTGCTGCCCCTTATGGAGAATGCTTACATGCACAATCATCAAATCCTGCTACAGACTTTTGTGATCTCAACATATAG

Coding sequence (CDS)

ATGGTGCAACTTCCCAAGTTTGCAGCTCTGAAATCAAAGTACAACAACAAATACTTGCGATATGTGAATGAAACGTCTTCCCCAGTCCGTACATTTCTACAATACTCAGGCAAGGAGATTCTTACTCCATATACAAAGTTGGAGTTGGAGCAAGCTCAATCTGACCCATCTTTATTCCATATAAAATGTTGTTACAACAACAAATATTGGGTTAGTTCCGTTTCAGACCATCATTTTATTGTTGCAACGGCTGACCAAAAACAAGAAGACAAATCCAAATGGACATGCACATTGTTTCGTCCAACTTATGACAACAATCATCAATCATTTCGATTCTCTCGTGTGTTTCTTGGTTTAATTGTGGTGTTGTCGAAGGCTGCTGCCCCTTATGGAGAATGCTTACATGCACAATCATCAAATCCTGCTACAGACTTTTGTGATCTCAACATATAG

Protein sequence

MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFHIKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLIVVLSKAAAPYGECLHAQSSNPATDFCDLNI

Homology

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BLAST of CcUC06G110240 vs. NCBI nr
Match: XP_004145082.1 (uncharacterized protein LOC101206536 [Cucumis sativus] >KGN46300.1 hypothetical protein Csa_005330 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 119/151 (78.81%), Postives = 129/151 (85.43%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MV LPKFAALKSKYNNKYL YVNE SS VRTFL+YSG EILTP+TKLE EQAQSDPS +H
Sbjct: 1   MVYLPKFAALKSKYNNKYLCYVNEKSSTVRTFLRYSGDEILTPFTKLEFEQAQSDPSSYH 60

Query: 61  IKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLI 120
           IKCCYNNKY VS+ SDHH+IVA ADQKQEDKSKWTCTLFRP YDN HQSF+FS VFLG  
Sbjct: 61  IKCCYNNKYLVSASSDHHYIVAGADQKQEDKSKWTCTLFRPAYDNYHQSFQFSHVFLGSH 120

Query: 121 VVLSKAAAPYGECLHAQSSNPATD-FCDLNI 151
           VVL ++ APYGECL AQSS+P TD   DLN+
Sbjct: 121 VVLWRSTAPYGECLRAQSSDPTTDHLSDLNM 151

[Close]

BLAST of CcUC06G110240 vs. NCBI nr
Match: KAA0039951.1 (uncharacterized protein E6C27_scaffold122G002310 [Cucumis melo var. makuwa] >TYK24552.1 uncharacterized protein E5676_scaffold266G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 6.1e-60
Identity = 121/152 (79.61%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MV LPKFAALKSKYNNKYLRYVNE SSPVRTFLQYSG EILTP+TK E E+AQSDPS +H
Sbjct: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAQSDPSSYH 60

Query: 61  IKCCYNNKYWVS-SVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGL 120
           IKCCYNNKY VS S SDHH+IVA ADQKQEDKSKWTCTLFRPTYDN HQSFRFS V+LG 
Sbjct: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120

Query: 121 IVVLSKAAAPYGECLHAQSSNPATDF-CDLNI 151
            VVL +  APYGECL AQSS    D  CDLN+
Sbjct: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNM 152

[Close]

BLAST of CcUC06G110240 vs. NCBI nr
Match: XP_008460197.1 (PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 2.3e-59
Identity = 120/152 (78.95%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MV LPKFAALKSKYNNKYLRYVNE SSPVRTFLQYSG EILTP+TK E E+A SDPS +H
Sbjct: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH 60

Query: 61  IKCCYNNKYWVS-SVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGL 120
           IKCCYNNKY VS S SDHH+IVA ADQKQEDKSKWTCTLFRPTYDN HQSFRFS V+LG 
Sbjct: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120

Query: 121 IVVLSKAAAPYGECLHAQSSNPATDF-CDLNI 151
            VVL +  APYGECL AQSS    D  CDLN+
Sbjct: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNM 152

[Close]

BLAST of CcUC06G110240 vs. NCBI nr
Match: KAG6592983.1 (hypothetical protein SDJN03_12459, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 111/150 (74.00%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MVQLPK A LKSKYN+ YLR+VNE  SPVRTF+QYSGKEIL+P+T+ E EQA+ DPSL+H
Sbjct: 1   MVQLPKSAVLKSKYNHNYLRFVNEACSPVRTFMQYSGKEILSPFTQFEFEQAKCDPSLYH 60

Query: 61  IKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLI 120
           IKCCYNNKYWVS   DHHFIVA ADQK EDKSKWTCTLFRP YD+ HQSFRF  V LGL 
Sbjct: 61  IKCCYNNKYWVSLARDHHFIVAGADQKDEDKSKWTCTLFRPVYDSCHQSFRFCHVHLGLN 120

Query: 121 VVLSKAAAPYGECLHAQSSNPATDFCDLNI 151
           VVL +  APYGECL AQ S P  D CDL+I
Sbjct: 121 VVLWRVGAPYGECLRAQWSVPDKDLCDLSI 150

[Close]

BLAST of CcUC06G110240 vs. NCBI nr
Match: XP_023514586.1 (uncharacterized protein LOC111778837 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 9.7e-58
Identity = 109/150 (72.67%), Postives = 121/150 (80.67%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MVQLPK A LKSKYN+ YLR+VNE  SPVRTF+QYSGKEIL+P+T+ E EQA+ DPSL+H
Sbjct: 1   MVQLPKSAVLKSKYNHNYLRFVNEACSPVRTFMQYSGKEILSPFTQFEFEQAKCDPSLYH 60

Query: 61  IKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLI 120
           IKCCYNNKYWVS   DHHFIVA ADQK EDKSKWTCTLFRP YD+ HQSFRF  V LGL 
Sbjct: 61  IKCCYNNKYWVSLARDHHFIVAGADQKDEDKSKWTCTLFRPVYDSCHQSFRFCHVHLGLN 120

Query: 121 VVLSKAAAPYGECLHAQSSNPATDFCDLNI 151
           VVL +   PYGECL AQ S P  D CDL++
Sbjct: 121 VVLWRVGPPYGECLRAQWSVPDKDLCDLSV 150

[Close]

BLAST of CcUC06G110240 vs. ExPASy TrEMBL
Match: A0A0A0K956 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080920 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.7e-61
Identity = 119/151 (78.81%), Postives = 129/151 (85.43%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MV LPKFAALKSKYNNKYL YVNE SS VRTFL+YSG EILTP+TKLE EQAQSDPS +H
Sbjct: 1   MVYLPKFAALKSKYNNKYLCYVNEKSSTVRTFLRYSGDEILTPFTKLEFEQAQSDPSSYH 60

Query: 61  IKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLI 120
           IKCCYNNKY VS+ SDHH+IVA ADQKQEDKSKWTCTLFRP YDN HQSF+FS VFLG  
Sbjct: 61  IKCCYNNKYLVSASSDHHYIVAGADQKQEDKSKWTCTLFRPAYDNYHQSFQFSHVFLGSH 120

Query: 121 VVLSKAAAPYGECLHAQSSNPATD-FCDLNI 151
           VVL ++ APYGECL AQSS+P TD   DLN+
Sbjct: 121 VVLWRSTAPYGECLRAQSSDPTTDHLSDLNM 151

[Close]

BLAST of CcUC06G110240 vs. ExPASy TrEMBL
Match: A0A5D3DM06 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00970 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.9e-60
Identity = 121/152 (79.61%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MV LPKFAALKSKYNNKYLRYVNE SSPVRTFLQYSG EILTP+TK E E+AQSDPS +H
Sbjct: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAQSDPSSYH 60

Query: 61  IKCCYNNKYWVS-SVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGL 120
           IKCCYNNKY VS S SDHH+IVA ADQKQEDKSKWTCTLFRPTYDN HQSFRFS V+LG 
Sbjct: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120

Query: 121 IVVLSKAAAPYGECLHAQSSNPATDF-CDLNI 151
            VVL +  APYGECL AQSS    D  CDLN+
Sbjct: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNM 152

[Close]

BLAST of CcUC06G110240 vs. ExPASy TrEMBL
Match: A0A1S3CBZ5 (uncharacterized protein LOC103499082 OS=Cucumis melo OX=3656 GN=LOC103499082 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 120/152 (78.95%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MV LPKFAALKSKYNNKYLRYVNE SSPVRTFLQYSG EILTP+TK E E+A SDPS +H
Sbjct: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH 60

Query: 61  IKCCYNNKYWVS-SVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGL 120
           IKCCYNNKY VS S SDHH+IVA ADQKQEDKSKWTCTLFRPTYDN HQSFRFS V+LG 
Sbjct: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120

Query: 121 IVVLSKAAAPYGECLHAQSSNPATDF-CDLNI 151
            VVL +  APYGECL AQSS    D  CDLN+
Sbjct: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNM 152

[Close]

BLAST of CcUC06G110240 vs. ExPASy TrEMBL
Match: A0A6J1H7H4 (uncharacterized protein LOC111461141 OS=Cucurbita moschata OX=3662 GN=LOC111461141 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.0e-58
Identity = 107/150 (71.33%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MVQLP+FAALKSKYN+ YLRY+NET SPVR+FLQYSGK+ILTP+TK E EQA+ DPSLFH
Sbjct: 1   MVQLPRFAALKSKYNDNYLRYINETCSPVRSFLQYSGKDILTPFTKFEFEQARCDPSLFH 60

Query: 61  IKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLI 120
           IKCCYNNKYWVS   DHHFIVA AD K+ED+ KWTCTLFRP Y++ HQS+RF  V LG  
Sbjct: 61  IKCCYNNKYWVSWACDHHFIVAGADHKEEDRYKWTCTLFRPVYESCHQSYRFCHVRLGFN 120

Query: 121 VVLSKAAAPYGECLHAQSSNPATDFCDLNI 151
           VVL +   P+GECL AQ S+P  D CDL+I
Sbjct: 121 VVLWRGGPPFGECLRAQWSDPDRDLCDLSI 150

[Close]

BLAST of CcUC06G110240 vs. ExPASy TrEMBL
Match: A0A6J1H7S9 (uncharacterized protein LOC111461222 OS=Cucurbita moschata OX=3662 GN=LOC111461222 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.8e-57
Identity = 108/150 (72.00%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 1   MVQLPKFAALKSKYNNKYLRYVNETSSPVRTFLQYSGKEILTPYTKLELEQAQSDPSLFH 60
           MVQLPK   LKSKYN+ YLR+VNE  SPVRTF+QYSGKEIL+P+T  E EQA+ DPSL+H
Sbjct: 1   MVQLPKSVVLKSKYNHNYLRFVNEACSPVRTFMQYSGKEILSPFTPFEFEQAKCDPSLYH 60

Query: 61  IKCCYNNKYWVSSVSDHHFIVATADQKQEDKSKWTCTLFRPTYDNNHQSFRFSRVFLGLI 120
           IKCCYNNKYWVS   DHHFIVA AD+K EDKSKWTCTLFRP YDN HQSFRF  V LGL 
Sbjct: 61  IKCCYNNKYWVSLARDHHFIVAGADRKDEDKSKWTCTLFRPVYDNCHQSFRFCHVHLGLN 120

Query: 121 VVLSKAAAPYGECLHAQSSNPATDFCDLNI 151
           VVL +   PYGECL AQ S P  D CDL++
Sbjct: 121 VVLWRVGPPYGECLRAQWSVPDKDLCDLSV 150

The following BLAST results are available for this feature:

BLAST of CcUC06G110240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145082.1	1.6e-60	78.81	uncharacterized protein LOC101206536 [Cucumis sativus] >KGN46300.1 hypothetical ...	[more]
KAA0039951.1	6.1e-60	79.61	uncharacterized protein E6C27_scaffold122G002310 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008460197.1	2.3e-59	78.95	PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo]	[more]
KAG6592983.1	2.0e-58	74.00	hypothetical protein SDJN03_12459, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023514586.1	9.7e-58	72.67	uncharacterized protein LOC111778837 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC06G110240 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G110240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K956	7.7e-61	78.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G080920 PE=4 SV=1	[more]
A0A5D3DM06	2.9e-60	79.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CBZ5	1.1e-59	78.95	uncharacterized protein LOC103499082 OS=Cucumis melo OX=3656 GN=LOC103499082 PE=...	[more]
A0A6J1H7H4	8.0e-58	71.33	uncharacterized protein LOC111461141 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1H7S9	1.8e-57	72.00	uncharacterized protein LOC111461222 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]

BLAST of CcUC06G110240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008998	Agglutinin domain	SMART	SM00791	agglutinin	coord: 2..147 e-value: 3.2E-5 score: 20.6
IPR008998	Agglutinin domain	PFAM	PF07468	Agglutinin	coord: 3..138 e-value: 2.9E-22 score: 79.5
None	No IPR available	GENE3D	2.80.10.50		coord: 2..149 e-value: 6.2E-49 score: 167.6
None	No IPR available	PANTHER	PTHR39244:SF5	NATTERIN-4	coord: 1..143
None	No IPR available	PANTHER	PTHR39244	NATTERIN-4	coord: 1..143
IPR036242	Agglutinin domain superfamily	SUPERFAMILY	50382	Agglutinin	coord: 3..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G110240.1	CcUC06G110240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region