Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATCCATCCTATAGATCCCAACAAACCTGCTCCTACGATCACTCCAAACGCAACCCCTGCCTTTTGTCCGCCGCTCAGTCCTTTTGAACCTCCACCACCCTTTTCATTCAATGCTTCGCTAGTCCGCGACGCCGGTGGTGGAGATGGCACTGGTGCGGGTGGTGAGATAATGTTGGCATTGGGTGGCGGTGGTGGAGATGAGTTGTTCGTATTGGATGGCGGTGAAGGTGAAGGTGGGGGTGGACTATCGGTTGTGTTGGACGCTGGAGGCGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGTGGTGGACTTTCAGGTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTATTGGACGCTGGCGGGGGAGGTGGAGTATCAGTTGTGTTGGATGGTGGTAGCGGCGGTGGTGGAGTATCAGTTGTGTTGGATGGCAGCAGTGGTGGTGGTGGTGGACTGTTTGTTGTGTTGGATGGCAGCGGCGGTGGAGGACTGTCAATTGAGTTCGATGGCGAGGGAGGAGGAGATACATCTTGA
mRNA sequence
ATGCAAATCCATCCTATAGATCCCAACAAACCTGCTCCTACGATCACTCCAAACGCAACCCCTGCCTTTTGTCCGCCGCTCAGTCCTTTTGAACCTCCACCACCCTTTTCATTCAATGCTTCGCTAGTCCGCGACGCCGGTGGTGGAGATGGCACTGGTGCGGGTGGTGAGATAATGTTGGCATTGGGTGGCGGTGGTGGAGATGAGTTGTTCGTATTGGATGGCGGTGAAGGTGAAGGTGGGGGTGGACTATCGGTTGTGTTGGACGCTGGAGGCGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGTGGTGGACTTTCAGGTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTATTGGACGCTGGCGGGGGAGGTGGAGTATCAGTTGTGTTGGATGGTGGTAGCGGCGGTGGTGGAGTATCAGTTGTGTTGGATGGCAGCAGTGGTGGTGGTGGTGGACTGTTTGTTGTGTTGGATGGCAGCGGCGGTGGAGGACTGTCAATTGAGTTCGATGGCGAGGGAGGAGGAGATACATCTTGA
Coding sequence (CDS)
ATGCAAATCCATCCTATAGATCCCAACAAACCTGCTCCTACGATCACTCCAAACGCAACCCCTGCCTTTTGTCCGCCGCTCAGTCCTTTTGAACCTCCACCACCCTTTTCATTCAATGCTTCGCTAGTCCGCGACGCCGGTGGTGGAGATGGCACTGGTGCGGGTGGTGAGATAATGTTGGCATTGGGTGGCGGTGGTGGAGATGAGTTGTTCGTATTGGATGGCGGTGAAGGTGAAGGTGGGGGTGGACTATCGGTTGTGTTGGACGCTGGAGGCGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGTGGTGGACTTTCAGGTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTATTGGACGCTGGCGGGGGAGGTGGAGTATCAGTTGTGTTGGATGGTGGTAGCGGCGGTGGTGGAGTATCAGTTGTGTTGGATGGCAGCAGTGGTGGTGGTGGTGGACTGTTTGTTGTGTTGGATGGCAGCGGCGGTGGAGGACTGTCAATTGAGTTCGATGGCGAGGGAGGAGGAGATACATCTTGA
Protein sequence
MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGGGDTS
Homology
BLAST of CcUC05G103140 vs. NCBI nr
Match:
XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus])
HSP 1 Score: 266.2 bits (679), Expect = 2.9e-67
Identity = 177/255 (69.41%), Postives = 187/255 (73.33%), Query Frame = 0
Query: 1 MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGG 60
MQI+P +PNKP P ITPNA PAFCPPL+PFEPPPPFSFNA L GGGD G GAGG
Sbjct: 1 MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGG 60
Query: 61 EIMLALGGGGGDELFVLDGG-------EGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLS 120
++ + LGGGGG EL VLDGG +G+GGGG SVVL GGGGG SV LD GGGGG S
Sbjct: 61 KLTVELGGGGG-ELVVLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGAS 120
Query: 121 VVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLS 180
V LD GGGGG SV LD GGGGG S LD GGGGG+SV LD GGGGG SV LD GGGGG S
Sbjct: 121 VALDGGGGGGASVALDGGGGGGASVALDGGGGGGVSVALDGGGGGGASVALDGGGGGGAS 180
Query: 181 VVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGG 240
V LD GGGGG SV LD GGGGG SV LDGG GGGG SV LDG GGGGG V LDG GGG
Sbjct: 181 VALDGGGGGGASVALDGGGGGGASVALDGG-GGGGASVALDG--GGGGGASVALDGGGGG 240
Query: 241 GLSIEFDGEGGGDTS 245
G S+ DG GGGD S
Sbjct: 241 GASVVLDG-GGGDAS 250
BLAST of CcUC05G103140 vs. NCBI nr
Match:
XP_016900208.1 (PREDICTED: loricrin-like [Cucumis melo])
HSP 1 Score: 165.6 bits (418), Expect = 5.3e-37
Identity = 116/153 (75.82%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 63 GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSV 122
GGGGGDEL VLD GGGG+SVVLD GGGGG+SVV D GGGGG+SVV D GGGGG+SV
Sbjct: 7 GGGGGDELVVLD-----GGGGVSVVLD-GGGGGVSVVFDGGGGGGVSVVFDGGGGGGVSV 66
Query: 123 VLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSV 182
V D GGGGG+S V D GGGGG+ VVLD GGGGG+SVV D GGGGG+SVV D GGGGG+SV
Sbjct: 67 VFDGGGGGGVSVVFDGGGGGGVLVVLDGGGGGGVSVVFD-GGGGGVSVVFD-GGGGGVSV 126
Query: 183 VLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGG 216
+LD GGGGGVSVVLDGG GGGGVSV LDG GG
Sbjct: 127 MLDGGGGGGVSVVLDGG-GGGGVSVGLDGGGGG 150
BLAST of CcUC05G103140 vs. NCBI nr
Match:
KAG6601160.1 (hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 153.3 bits (386), Expect = 2.7e-33
Identity = 106/163 (65.03%), Postives = 111/163 (68.10%), Query Frame = 0
Query: 21 PAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGG 80
PAFCPPLSPFE PPFSFNA V AGGGD G GAGGE++++
Sbjct: 2 PAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVS--------------- 61
Query: 81 EGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVL 140
GGGGLSVV D GGGGGL VVLD GGGGGL VVLD GGGGL VVLD GGGGL VL
Sbjct: 62 --GGGGGLSVVFD-GGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLPVVL 121
Query: 141 DAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGG 180
D GGGGL VVLD GGGGL VVLD GGGG SVV + GGGGG
Sbjct: 122 DGAGGGGLPVVLDGAGGGGLPVVLDGGGGGAPSVVFNGGGGGG 146
BLAST of CcUC05G103140 vs. NCBI nr
Match:
XP_022957272.1 (loricrin-like [Cucurbita moschata])
HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32
Identity = 106/159 (66.67%), Postives = 111/159 (69.81%), Query Frame = 0
Query: 1 MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGG 60
MQ++P +PNKPAP ITPNA PAFCPPLSPFE PPFSFNA V AGGGD G GAGG
Sbjct: 1 MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGG 60
Query: 61 EIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGG 120
E ML GGGGG + V DG GGGGL VVLD GGGGGL VVLD GGGGL VVLD G
Sbjct: 61 E-MLVSGGGGGLSV-VFDG----GGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAG 120
Query: 121 GGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGG 156
GGGL VVLD GGG GGGG SVV + GGGGG
Sbjct: 121 GGGLPVVLDGGGG---------GGGGAPSVVFNGGGGGG 144
BLAST of CcUC05G103140 vs. NCBI nr
Match:
XP_023549817.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 146.0 bits (367), Expect = 4.3e-31
Identity = 100/147 (68.03%), Postives = 106/147 (72.11%), Query Frame = 0
Query: 1 MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGG 60
MQ++P +PNKPAP ITPNA PAFCPPLSPFE PPFSFNA V AG GD G GAGG
Sbjct: 17 MQMNPKNPNKPAPMITPNAMPAFCPPLSPFESAPPFSFNALFVAGAGAGDELTSGEGAGG 76
Query: 61 EIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGG 120
E ML GGGGG + V DG GGGG SVV + GGGGGL VVLDA GGGGL VVLD G
Sbjct: 77 E-MLVSGGGGGLSV-VFDG----GGGGPSVVFNGGGGGGLPVVLDAAGGGGLPVVLDGAG 136
Query: 121 GGGLSVVLDAGGGGGLSGVLDAGGGGG 144
GGGL VVLD GGGGG V+ GGGGG
Sbjct: 137 GGGLPVVLDGGGGGGAPSVVFNGGGGG 157
BLAST of CcUC05G103140 vs. ExPASy Swiss-Prot
Match:
P09789 (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 PE=1 SV=1)
HSP 1 Score: 49.7 bits (117), Expect = 5.5e-05
Identity = 86/196 (43.88%), Postives = 94/196 (47.96%), Query Frame = 0
Query: 46 AGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGG 105
AGGG G GAGG LGGGGG + GG G GGG V AG GGG G G
Sbjct: 107 AGGGFGGGAGGGAGGGLGGGGG----LGGGGGGGAGGGGGVGGGAGSGGGF------GAG 166
Query: 106 GGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGG 165
GG+ AGGG G GGGGG+ G GGG G + G GGGL + GGG
Sbjct: 167 GGVGGGAGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGGGG 226
Query: 166 GGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDG 225
GG +GGGGG+ GGG G + GG GGG G GGGGG G
Sbjct: 227 GG------SGGGGGIGGGSGHGGGFGAGGGVGGGVGGGAAG----GGGGGGGG-----GG 276
Query: 226 SGGGGLSIEFDGEGGG 242
GGGGL G GGG
Sbjct: 287 GGGGGLG-GGSGHGGG 276
BLAST of CcUC05G103140 vs. ExPASy Swiss-Prot
Match:
P27483 (Glycine-rich cell wall structural protein OS=Arabidopsis thaliana OX=3702 GN=At3g17050 PE=3 SV=2)
HSP 1 Score: 49.3 bits (116), Expect = 7.2e-05
Identity = 84/202 (41.58%), Postives = 92/202 (45.54%), Query Frame = 0
Query: 47 GGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGG 106
G G G GAGG GGG G L GG GGGG+ G GGGL G GG
Sbjct: 48 GFGGGIGAGGGFGGGAGGGAGGGL----GGGAGGGGGIGGGAGGGAGGGLGGGAGGGLGG 107
Query: 107 GLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGG 166
G + G GGG L G GGG+ G G GGGL + G GGG AGGGG
Sbjct: 108 GHGGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGG------AGGGG 167
Query: 167 GL----SVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSG---GGGVSVVLDGSSGGGGGL 226
GL + G GGG L G GGG+ GGSG GGG+ G +GGGGG
Sbjct: 168 GLGGGHGGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGG- 227
Query: 227 FVVLDGSGGGGLSIEFDGEGGG 242
GGGGL G GGG
Sbjct: 228 -----AGGGGGLG---GGHGGG 230
BLAST of CcUC05G103140 vs. ExPASy TrEMBL
Match:
A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 2.6e-37
Identity = 116/153 (75.82%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 63 GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSV 122
GGGGGDEL VLD GGGG+SVVLD GGGGG+SVV D GGGGG+SVV D GGGGG+SV
Sbjct: 7 GGGGGDELVVLD-----GGGGVSVVLD-GGGGGVSVVFDGGGGGGVSVVFDGGGGGGVSV 66
Query: 123 VLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSV 182
V D GGGGG+S V D GGGGG+ VVLD GGGGG+SVV D GGGGG+SVV D GGGGG+SV
Sbjct: 67 VFDGGGGGGVSVVFDGGGGGGVLVVLDGGGGGGVSVVFD-GGGGGVSVVFD-GGGGGVSV 126
Query: 183 VLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGG 216
+LD GGGGGVSVVLDGG GGGGVSV LDG GG
Sbjct: 127 MLDGGGGGGVSVVLDGG-GGGGVSVGLDGGGGG 150
BLAST of CcUC05G103140 vs. ExPASy TrEMBL
Match:
A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 6.5e-33
Identity = 106/159 (66.67%), Postives = 111/159 (69.81%), Query Frame = 0
Query: 1 MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGG 60
MQ++P +PNKPAP ITPNA PAFCPPLSPFE PPFSFNA V AGGGD G GAGG
Sbjct: 1 MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGG 60
Query: 61 EIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGG 120
E ML GGGGG + V DG GGGGL VVLD GGGGGL VVLD GGGGL VVLD G
Sbjct: 61 E-MLVSGGGGGLSV-VFDG----GGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAG 120
Query: 121 GGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGG 156
GGGL VVLD GGG GGGG SVV + GGGGG
Sbjct: 121 GGGLPVVLDGGGG---------GGGGAPSVVFNGGGGGG 144
BLAST of CcUC05G103140 vs. ExPASy TrEMBL
Match:
A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 4.8e-28
Identity = 92/141 (65.25%), Postives = 97/141 (68.79%), Query Frame = 0
Query: 3 IHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGDGTGAGGEIMLAL 62
++P +PNKPAP ITP PAFCPPLSPFE PPFSFNAS V AGGGD +G
Sbjct: 1 MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEG----- 60
Query: 63 GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSV 122
GGGG V DG G GGGGL VLD GGGGGL VVLD GGGGGL VVLD GGGGL V
Sbjct: 61 AGGGGGVSVVFDG--GGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPV 120
Query: 123 VLDAGGGGGLSGVLDAGGGGG 144
VLD GGGGG V+ GGGGG
Sbjct: 121 VLDGGGGGGAPSVVFNGGGGG 134
BLAST of CcUC05G103140 vs. ExPASy TrEMBL
Match:
A0A2B7ZNF9 (Uncharacterized protein (Fragment) OS=Emmonsia crescens OX=73230 GN=GX50_02507 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 2.4e-19
Identity = 114/207 (55.07%), Postives = 123/207 (59.42%), Query Frame = 0
Query: 47 GGGDGTGAGGEIMLALGGGGGDELFVLDGGEG------EGGGGLSVVLDA-GGGGGLSVV 106
GGG G GG +L GGGGG + + GG G EGGGG SVVL A GGGGG SVV
Sbjct: 62 GGGGGGDGGGTGVLGAGGGGGGSVVLGAGGGGTQVDGYEGGGGGSVVLGAGGGGGGGSVV 121
Query: 107 LDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVV 166
L AGGGGG GGGGG + VL AGGGGG G G GGG + VL AGGGGG SVV
Sbjct: 122 LGAGGGGGGG----GGGGGGGTEVLGAGGGGGGGGTEVLGAGGGGTQVLGAGGGGGGSVV 181
Query: 167 LDAGGGGGLSVVLDAGGGGGLSVVLDA-GGGGGVSVVLD----GGSGGGGVSVVLDGSSG 226
L AGGGG + GGGGG + VL A GGGGGVSVVL GG GGGG V+ G
Sbjct: 182 LGAGGGGTQVLGAGGGGGGGGTEVLGAGGGGGGVSVVLGAGGAGGGGGGGTEVL-----G 241
Query: 227 GGGGLFVVLDGSGGGGLSIEFDGEGGG 242
GGG VL GGGG S+ GGG
Sbjct: 242 AGGGGTQVLGAGGGGGGSVVLGAGGGG 259
BLAST of CcUC05G103140 vs. ExPASy TrEMBL
Match:
A0A6I8U367 (Uncharacterized protein OS=Aedes aegypti OX=7159 GN=110675136 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 6.1e-15
Identity = 98/209 (46.89%), Postives = 117/209 (55.98%), Query Frame = 0
Query: 42 LVRDAGGG--------DGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGG 101
+V+ GGG G G GG + + GGGGG + + +GGGG VV+ + GG
Sbjct: 44 VVQSHGGGGGGIVVQSHGRGGGGVVSQSHGGGGGGVVV-----QSQGGGGSGVVVQSHGG 103
Query: 102 GGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDA-GGGGGLSGVLDAGGGGGLSVVLDAGG 161
GG VV + GGGG VV+ + GGGG VV + GGGGG V GGGGG VV GG
Sbjct: 104 GGGGVVSQSHGGGGGGVVVQSHGGGGGGVVSQSHGGGGGGVVVQSHGGGGGGVVVQSHGG 163
Query: 162 GGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGS 221
GGG VV GGGGG VV GGGGG+ V GGGGGV V G GGGG VV+
Sbjct: 164 GGGGVVVQSHGGGGGGVVVQSQGGGGGVVVSQSHGGGGGVVVSQSQGGGGGG--VVMQSH 223
Query: 222 SGGGGGLFVVLDGSGGGGLSIEFDGEGGG 242
GGGGG+ V GGGG+ ++ G GGG
Sbjct: 224 GGGGGGVVVQSHRGGGGGVVVQPHGGGGG 245
BLAST of CcUC05G103140 vs. TAIR 10
Match:
AT2G32690.1 (glycine-rich protein 23 )
HSP 1 Score: 47.0 bits (110), Expect = 2.5e-05
Identity = 79/165 (47.88%), Postives = 80/165 (48.48%), Query Frame = 0
Query: 76 GEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGV 135
G+G GGGG GGGGGL GGGGGL GGGGGL GGGGGL G
Sbjct: 60 GKGLGGGG-----GLGGGGGL------GGGGGL------GGGGGLGGGGGLGGGGGLGGG 119
Query: 136 LDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVV 195
GGGGGL GGGGGL GGGGGL GGGGGL G GGG
Sbjct: 120 SGLGGGGGLGGGSGLGGGGGLG----GGGGGGL------GGGGGLG----GGAGGGYGGG 179
Query: 196 LDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGG 241
GG GGGG G GGGGG F G GGG G GG
Sbjct: 180 AGGGLGGGGGIGGGGGFGGGGGGGF---GGGAGGGFGKGIGGGGG 190
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P09789 | 5.5e-05 | 43.88 | Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 ... | [more] |
P27483 | 7.2e-05 | 41.58 | Glycine-rich cell wall structural protein OS=Arabidopsis thaliana OX=3702 GN=At3... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4DW63 | 2.6e-37 | 75.82 | loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1 | [more] |
A0A6J1GYP3 | 6.5e-33 | 66.67 | loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1 | [more] |
A0A6J1JS83 | 4.8e-28 | 65.25 | glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G... | [more] |
A0A2B7ZNF9 | 2.4e-19 | 55.07 | Uncharacterized protein (Fragment) OS=Emmonsia crescens OX=73230 GN=GX50_02507 P... | [more] |
A0A6I8U367 | 6.1e-15 | 46.89 | Uncharacterized protein OS=Aedes aegypti OX=7159 GN=110675136 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G32690.1 | 2.5e-05 | 47.88 | glycine-rich protein 23 | [more] |