CcUC05G084660 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G084660
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L13a, putative
Location	CicolChr05: 3097016 .. 3099340 (-)
RNA-Seq Expression	CcUC05G084660
Synteny	CcUC05G084660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAGCTGCTCGCTGAGACACAGAGAGTAGCCGCTGAACCAAAAATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCACCATATGCTCGGGAGGCTTGCTTCGATTATAGCTAAGGAACTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGCATGAATACCAAACCCTCTCATGGACCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGTAATGTCTATTGTCGCACTGTTTCTTTCGTTTTTTTAATCCCTGTTTTTATTGGTTAGATCGAGATGAAAATGTGTGTTCGCTTGTCTTTGTATTACTTGAATGGCGTTTTCTGCGACTTATTTAGGTATGGAATCGATCATGAGAGCAGCAACTTACATTTATGTATTTTTTGTGGTCTTTTAGTAATCAGTTAAATTTATGCGTTTAGGTCAGGAAGAAAATTTGTTTTTCACCGTATTCGTATTCCTTGAAAGGCTATGTTATAATCTTAATGAATTAGAAGAGCAGCAATACAGGTGTGCAACTTATGTTTTCTTTGATTTGTAAGTAATATGTATGGTCTACACTGTATTGCGCATTCAATGCTTGTGGAATCCAATTTCATGGTTTACTATGTTTGGGTTGAAAACAGTTTGGCTTATGCATGCCATGTCGAAACTGTAAATTCATTTTCCATATTTTCACTTCCTCAAGGAAAATAGTGTTCTTTCCTGCTATGCTTCTAGATTAGAGGTTTGGGTTCATCCCTTATCTGTTTTGAGTTTTAATTCCATAATGTATGTACTAGATAGATTGGCAGCTTAATTGGTTTCTATTTGTGCGATTCTTAGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCCCGATTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCCGACGCTCTCAAGTGAGTTTGAGGACAATGTCTTCATATTATATTTATGGTGACAATGGCGCAATAGGCAGTAATGAATTCTGTTTTTTTACTTGTAGTATATTATCTTAGCTATGACTTCAAATATTTGGATACAAAAGGAAAAAATGAGACGATGCAAGTAAACCTTCTTGTTCTGATTTTCTGTATTGACATGTTCTCTATATTGTAATATTATTAGGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTACGACACTATCAAGGTAAGCATTAAGATTGATGAATCTATACCATTCCACAAGGTTTCTGTTCACAAATTCTATCGTCCAACGCTATTAAATCAACATTTTGCCATAGTTTTTGTGCTCCCAAGTTGCACCCCATTTATTATATTGGAGAAATTATAGCACCACGTCCGTATTGAAATTTTCCTTCATTCATTCTAAGCCATTAGAGAGCATCTAAGAATGGTATGGAGTTCATAAATATAATAATCTATCATCTCTGGCATGTCAAATGTTGAATAGGATTAAGTACCACTAAGCAGCACTAGAAAATTTCTAATTCTCTTCAAGCATCCCCCATTTCTAACTATGGCTTTTTAGTCATCTTCCATTCGCTTTAGTATTGACGAAGTGTACCACTAAGCAGTACTAGAAAATTTCTAATTCTCTTCAAGCATCCCCCATTTCTAACTATGGCCTTTTAGTCATCTTCCATTCGCTTTAGTATTGATTAAGTGAATCGATGATGCTTGGCTATATGAATATGTTGTGTGTTACATTCTTTTACACTGATTTCTGATTTATTTGTTTTTGATCTTTCAGGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACTAAGTTGAGGGTCAAAGCCGAGAAGGTTGCAGACGAGAAGCTTGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAGTTTGTTTGCGAGATTTGTGTTGAGGGAGAATGCGTAATGTTATGGAGTTGCAGTTGAATTTACATTTTGCATTTTCTTTTTAGTACCATTTTGTTGTCTATTGATGTTGGTCGCCATTTTTCTTATCCTTTTTTCTTCGGATTTTGAAATTAGTTAAATTTTGGGGATCATTTATTATTCCTTATTCTACTCTACTTCAATAGATCTCATACCCTGAAAATTTGTTATATTTGACATGAATGTGTCTTCGAATGGACCACGCCCATTCATTAAA

mRNA sequence

CCTAGCTGCTCGCTGAGACACAGAGAGTAGCCGCTGAACCAAAAATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCACCATATGCTCGGGAGGCTTGCTTCGATTATAGCTAAGGAACTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGCATGAATACCAAACCCTCTCATGGACCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCCCGATTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCCGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTACGACACTATCAAGGTAAGCATTAAGATTGATGAATCTATACCATTCCACAAGGTTTCTGTTCACAAATTCTATCGTCCAACGCTATTAAATCAACATTTTGCCATAGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACTAAGTTGAGGGTCAAAGCCGAGAAGGTTGCAGACGAGAAGCTTGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAGTTTGTTTGCGAGATTTGTGTTGAGGGAGAATGCGTAATGTTATGGAGTTGCAGTTGAATTTACATTTTGCATTTTCTTTTTAGTACCATTTTGTTGTCTATTGATGTTGGTCGCCATTTTTCTTATCCTTTTTTCTTCGGATTTTGAAATTAGTTAAATTTTGGGGATCATTTATTATTCCTTATTCTACTCTACTTCAATAGATCTCATACCCTGAAAATTTGTTATATTTGACATGAATGTGTCTTCGAATGGACCACGCCCATTCATTAAA

Coding sequence (CDS)

ATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCACCATATGCTCGGGAGGCTTGCTTCGATTATAGCTAAGGAACTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGCATGAATACCAAACCCTCTCATGGACCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCCCGATTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCCGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTACGACACTATCAAGGTAAGCATTAAGATTGATGAATCTATACCATTCCACAAGGTTTCTGTTCACAAATTCTATCGTCCAACGCTATTAAATCAACATTTTGCCATAGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACTAAGTTGAGGGTCAAAGCCGAGAAGGTTGCAGACGAGAAGCTTGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAG

Protein sequence

MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYRPTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Homology

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BLAST of CcUC05G084660 vs. NCBI nr
Match: XP_022147118.1 (60S ribosomal protein L13a-4-like [Momordica charantia])

HSP 1 Score: 389.0 bits (998), Expect = 2.8e-104
Identity = 203/237 (85.65%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQL+VIAPIKY
Sbjct: 181 ----------ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLEVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. NCBI nr
Match: XP_004133995.1 (60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis melo] >KAA0049152.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KGN56740.1 hypothetical protein Csa_009815 [Cucumis sativus] >TYK17407.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa])

HSP 1 Score: 388.7 bits (997), Expect = 3.7e-104
Identity = 204/237 (86.08%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKER+QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERSQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. NCBI nr
Match: XP_022924796.1 (60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo] >KAG6582470.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018859.1 60S ribosomal protein L13a-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 4.9e-104
Identity = 202/237 (85.23%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. NCBI nr
Match: XP_023521847.1 (60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 203/237 (85.65%), Postives = 204/237 (86.08%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKERAQA YEKKKQL KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. NCBI nr
Match: XP_038878195.1 (60S ribosomal protein L13a-4-like [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 4.1e-103
Identity = 202/237 (85.23%), Postives = 204/237 (86.08%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYC LGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCFLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKERAQAAY KKKQLTKLRVKAEKVADEKLGP+LQVIAPIKY
Sbjct: 181 ----------ELERKRKERAQAAYGKKKQLTKLRVKAEKVADEKLGPELQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy Swiss-Prot
Match: Q9FKC0 (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.1e-98
Identity = 184/237 (77.64%), Postives = 195/237 (82.28%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKERA   YE+KKQL KLRVKAEKVA+EKLG QL ++AP+KY
Sbjct: 181 ----------ELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy Swiss-Prot
Match: Q9LRX8 (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 7.1e-98
Identity = 186/237 (78.48%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRLASIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKER+QA YE+KKQLTKLR KAEKVA+EKLG QL V+A IKY
Sbjct: 181 ----------ELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy Swiss-Prot
Match: Q9SFU1 (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.6e-97
Identity = 181/237 (76.37%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKERAQA YE+KKQL+KLR KAEKVA+EKLG QL V+AP+KY
Sbjct: 181 ----------ELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy Swiss-Prot
Match: Q9SVR0 (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.0e-96
Identity = 180/237 (75.95%), Postives = 194/237 (81.86%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKER+Q  YE+KKQL KLR KAEKVA+E+LG QL V+AP+KY
Sbjct: 181 ----------ELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy Swiss-Prot
Match: O49885 (60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-90
Identity = 172/237 (72.57%), Postives = 190/237 (80.17%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGI AKRVVVDARHHMLGRLASI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG  ALARLK YEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIK                     
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE+KRKER+Q  YE+KKQL KLRVKAE+VA EKLG QL ++AP+KY
Sbjct: 181 ----------ELEKKRKERSQVVYERKKQLNKLRVKAEQVAQEKLGSQLDILAPVKY 205

[Close]

BLAST of CcUC05G084660 vs. ExPASy TrEMBL
Match: A0A6J1D0E7 (60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.4e-104
Identity = 203/237 (85.65%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQL+VIAPIKY
Sbjct: 181 ----------ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLEVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy TrEMBL
Match: A0A5A7U034 (60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002690 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 204/237 (86.08%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKER+QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERSQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy TrEMBL
Match: A0A0A0L439 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 204/237 (86.08%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKER+QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERSQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy TrEMBL
Match: A0A1S3AW63 (60S ribosomal protein L13a-2-like OS=Cucumis melo OX=3656 GN=LOC103483483 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 204/237 (86.08%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKER+QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERSQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. ExPASy TrEMBL
Match: A0A6J1EAG0 (60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432187 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.4e-104
Identity = 202/237 (85.23%), Postives = 206/237 (86.92%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 ----------ELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of CcUC05G084660 vs. TAIR 10
Match: AT5G48760.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 359.0 bits (920), Expect = 2.9e-99
Identity = 184/237 (77.64%), Postives = 195/237 (82.28%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKERA   YE+KKQL KLRVKAEKVA+EKLG QL ++AP+KY
Sbjct: 181 ----------ELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of CcUC05G084660 vs. TAIR 10
Match: AT5G48760.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 359.0 bits (920), Expect = 2.9e-99
Identity = 184/237 (77.64%), Postives = 195/237 (82.28%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKERA   YE+KKQL KLRVKAEKVA+EKLG QL ++AP+KY
Sbjct: 181 ----------ELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of CcUC05G084660 vs. TAIR 10
Match: AT3G24830.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 358.2 bits (918), Expect = 5.0e-99
Identity = 186/237 (78.48%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRLASIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKER+QA YE+KKQLTKLR KAEKVA+EKLG QL V+A IKY
Sbjct: 181 ----------ELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of CcUC05G084660 vs. TAIR 10
Match: AT3G07110.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-98
Identity = 181/237 (76.37%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK--------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKERAQA YE+KKQL+KLR KAEKVA+EKLG QL V+AP+KY
Sbjct: 181 ----------ELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of CcUC05G084660 vs. TAIR 10
Match: AT3G07110.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 356.7 bits (914), Expect = 1.5e-98
Identity = 181/237 (76.37%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVSIKIDESIPFHKVSVHKFYR 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                     
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQ-------------------- 180

Query: 181 PTLLNQHFAIELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY 238
                     ELE KRKERAQA YE+KKQL+KLR KAEKVA+EKLG QL V+AP+KY
Sbjct: 181 ----------ELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY 207

The following BLAST results are available for this feature:

BLAST of CcUC05G084660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147118.1	2.8e-104	85.65	60S ribosomal protein L13a-4-like [Momordica charantia]	[more]
XP_004133995.1	3.7e-104	86.08	60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ri...	[more]
XP_022924796.1	4.9e-104	85.23	60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032....	[more]
XP_023521847.1	1.8e-103	85.65	60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038878195.1	4.1e-103	85.23	60S ribosomal protein L13a-4-like [Benincasa hispida]	[more]

BLAST of CcUC05G084660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKC0	4.1e-98	77.64	60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=...	[more]
Q9LRX8	7.1e-98	78.48	60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=...	[more]
Q9SFU1	1.6e-97	76.37	60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=...	[more]
Q9SVR0	3.0e-96	75.95	60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=...	[more]
O49885	1.9e-90	72.57	60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1	[more]

BLAST of CcUC05G084660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D0E7	1.4e-104	85.65	60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129...	[more]
A0A5A7U034	1.8e-104	86.08	60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L439	1.8e-104	86.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1	[more]
A0A1S3AW63	1.8e-104	86.08	60S ribosomal protein L13a-2-like OS=Cucumis melo OX=3656 GN=LOC103483483 PE=3 S...	[more]
A0A6J1EAG0	2.4e-104	85.23	60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CcUC05G084660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48760.1	2.9e-99	77.64	Ribosomal protein L13 family protein	[more]
AT5G48760.2	2.9e-99	77.64	Ribosomal protein L13 family protein	[more]
AT3G24830.1	5.0e-99	78.48	Ribosomal protein L13 family protein	[more]
AT3G07110.1	1.1e-98	76.37	Ribosomal protein L13 family protein	[more]
AT3G07110.2	1.5e-98	76.37	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 190..210
None	No IPR available	GENE3D	6.10.250.3250		coord: 186..237 e-value: 3.4E-13 score: 51.4
None	No IPR available	PANTHER	PTHR11545:SF20	60S RIBOSOMAL PROTEIN L13A-1-RELATED	coord: 190..237 coord: 1..160
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 10..115 e-value: 5.0E-27 score: 94.4
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 1..160
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 190..237
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 11..135 score: 19.397787
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 12..113 e-value: 2.30926E-40 score: 132.628
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 8..154 e-value: 1.7E-61 score: 208.5
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 12..154
IPR005755	Ribosomal protein L13, eukaryotic/archaeal	TIGRFAM	TIGR01077	TIGR01077	coord: 12..153 e-value: 4.0E-53 score: 177.5
IPR023563	Ribosomal protein L13, conserved site	PROSITE	PS00783	RIBOSOMAL_L13	coord: 89..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G084660.1	CcUC05G084660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome