CcUC04G074830 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC04G074830
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr04: 30692685 .. 30693520 (-)
RNA-Seq ExpressionCcUC04G074830
SyntenyCcUC04G074830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTGGTGTTCCTCGACACTACCATAGCAAGCTCAGTGCTTGAAGTGTCCTTTGAAAAACCACTCACCACTGACGGCGGCGGTGCTGAGCTCGCCGCCCCTGTTACAGTGACCATAGCTTCCGATGCAATGGTGGTGGCCTCCCATTCTTCCTCAGTCACAGTGCGAGATGTCGACGGCACAAAAGGGTCCCAGAAATCCCAAGTGGATGACGGCGGCGGCGGCGGCGGCGGAGGTAGTGCCGGGGAGGCTGTGATCGAAGTCCAGGTGTCGGAACTAGGACTCATGGGGATATGTGGAGGCGGAGGCGGAGGCAGAGGCGGAGTTCGTGGGGTTGGAGATGGAAGCACCGGCGGGAGGTGGTGGTGGTAGTTCTGCTGCTGCTGCTGTTGCTGAGGGCGGCGAATGTAGGTCTCTGCATTGGAAAACTGCCGGAGAGCGGCACCGGTGCCGCGAAGAGAACGAATGTACAAGCTGTGAGAAGCTGAAAAATCTTGCCTCGCCTTCACCAACTGTTTCATGTACCTCTTTCTTGCTTTGCACCTCGACACAGTTTCTTGTCTTTCTAATCTCGAGTAACAGCAACCCATAGCTTCTTTGGCCAAAATCTCAAGCAGAAAGAAACTTTTCAAGAACAGAACAAAACTCGGGCGGTTTTCTATTTCCGATCTTCCGCCGATCTCCACATTCCGATGAGGGTGGCTAAAATGGGAGATCTTCCATTGGTGGTGGTGGTGGTGGTGGTTCAGGACGCTGTCAAACTCGTGCTTAAAAAAGCTACTCTCTTTCTTCCTTGTTACTCGCTGGCAAAGCCGGTGCCTTTTTTCTCACTCTCG

mRNA sequence

TCTTTGGTGTTCCTCGACACTACCATAGCAAGCTCAGTGCTTGAAGTGTCCTTTGAAAAACCACTCACCACTGACGGCGGCGGTGCTGAGCTCGCCGCCCCTGTTACAGTGACCATAGCTTCCGATGCAATGGTGGTGGCCTCCCATTCTTCCTCAGTCACAGTGCGAGATGTCGACGGCACAAAAGGGTCCCAGAAATCCCAAGTGGATGACGGCGGCGGCGGCGGCGGCGGAGGTAGTGCCGGGGAGGCTGTGATCGAAGTCCAGGACTCATGGGGATATGTGGAGGCGGAGGCGGAGGCAGAGGCGGAGTTCGTGGGGTTGGAGATGGAAGCACCGGCGGGAGGTGGTGGTGGTAGTTCTGCTGCTGCTGCTGTTGCTGAGGGCGGCGAATGTAGGTCTCTGCATTGGAAAACTGCCGGAGAGCGGCACCGGTGCCGCGAAGAGAACGAATGTACAAGCTGTGAGAAGCTGAAAAATCTTGCCTCGCCTTCACCAACTGTTTCATGTACCTCTTTCTTGCTTTGCACCTCGACACAGTTTCTTGTCTTTCTAATCTCGACAACCCATAGCTTCTTTGGCCAAAATCTCAAGCAGAAAGAAACTTTTCAAGAACAGAACAAAACTCGGGCGGTTTTCTATTTCCGATCTTCCGCCGATCTCCACATTCCGATGAGGGTGGCTAAAATGGGAGATCTTCCATTGGTGGTGGTGGTGGTGGTGGTTCAGGACGCTGTCAAACTCGTGCTTAAAAAAGCTACTCTCTTTCTTCCTTGTTACTCGCTGGCAAAGCCGGTGCCTTTTTTCTCACTCTCG

Coding sequence (CDS)

TCTTTGGTGTTCCTCGACACTACCATAGCAAGCTCAGTGCTTGAAGTGTCCTTTGAAAAACCACTCACCACTGACGGCGGCGGTGCTGAGCTCGCCGCCCCTGTTACAGTGACCATAGCTTCCGATGCAATGGTGGTGGCCTCCCATTCTTCCTCAGTCACAGTGCGAGATGTCGACGGCACAAAAGGGTCCCAGAAATCCCAAGTGGATGACGGCGGCGGCGGCGGCGGCGGAGGTAGTGCCGGGGAGGCTGTGATCGAAGTCCAGGACTCATGGGGATATGTGGAGGCGGAGGCGGAGGCAGAGGCGGAGTTCGTGGGGTTGGAGATGGAAGCACCGGCGGGAGGTGGTGGTGGTAGTTCTGCTGCTGCTGCTGTTGCTGAGGGCGGCGAATGTAGGTCTCTGCATTGGAAAACTGCCGGAGAGCGGCACCGGTGCCGCGAAGAGAACGAATGTACAAGCTGTGAGAAGCTGAAAAATCTTGCCTCGCCTTCACCAACTGTTTCATGTACCTCTTTCTTGCTTTGCACCTCGACACAGTTTCTTGTCTTTCTAATCTCGACAACCCATAGCTTCTTTGGCCAAAATCTCAAGCAGAAAGAAACTTTTCAAGAACAGAACAAAACTCGGGCGGTTTTCTATTTCCGATCTTCCGCCGATCTCCACATTCCGATGAGGGTGGCTAAAATGGGAGATCTTCCATTGGTGGTGGTGGTGGTGGTGGTTCAGGACGCTGTCAAACTCGTGCTTAAAAAAGCTACTCTCTTTCTTCCTTGTTACTCGCTGGCAAAGCCGGTGCCTTTTTTCTCACTCTCG

Protein sequence

SLVFLDTTIASSVLEVSFEKPLTTDGGGAELAAPVTVTIASDAMVVASHSSSVTVRDVDGTKGSQKSQVDDGGGGGGGGSAGEAVIEVQDSWGYVEAEAEAEAEFVGLEMEAPAGGGGGSSAAAAVAEGGECRSLHWKTAGERHRCREENECTSCEKLKNLASPSPTVSCTSFLLCTSTQFLVFLISTTHSFFGQNLKQKETFQEQNKTRAVFYFRSSADLHIPMRVAKMGDLPLVVVVVVVQDAVKLVLKKATLFLPCYSLAKPVPFFSLS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC04G074830.1CcUC04G074830.1mRNA