CcUC04G059640 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC04G059640
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Nuclear transcription factor Y subunit
Location	CicolChr04: 1051357 .. 1057954 (+)
RNA-Seq Expression	CcUC04G059640
Synteny	CcUC04G059640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTAATCCTTTTATCTTCTCTCTCTTATATAAACCATTTTAATCTTTGCTTTGTGTTTGCCCATTTGCCACCTGTTGCCTTTCTCTCTCCCAACAAAAATTTCTCTCATTGGAAATCTAGAATTTTCTCCCTTCCCAAACACTCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTAATTTCTTCTTCTGCACAATCTTTGAGGCTGTGTTTGGCAATTGGGTATCTCTTGGCTTTACAAAAATTCACTTTCTTTTTTATTATCCCAAACTTTCTTCCACTCCAAAACACTGTCTTGTGTTGAATTTCAATTTCTTTTGGACCCCAAACGCTGGTCTTATCTTCTCTCTACTGTGAGTTTCTTCATTTCTTAACTCTCTCTCTTATTGCTTTGATTTGCTTCCTTGCTTGCTTTTATAAAAAGTGATTTGCTTTTAAAAAAAGAAAACAAGTTGGTAGATTGTGTGCATGCATGGATTAATATGGATGTTGTCCAATCTGATGGATAGGATTTATGGTCAAATAAAAAGTTAAATTATGTATATATATATATATATATATATATAGTTTCACAGAATTATTGTTACTCTGTTAGTTTCATCTTTATATATATTTTCCTCATTTCATAGTCTCATCAGATATATAACTCAATTACTTATATAACTCAAAAGTGTTACTGACTTTGACAAAAATAAATTAAGACATAGATCAAAAGTATATGGGTAAAAATTAAAACTGAAGGTAGATATTAATCTTACACATTATATGTGAAGAAGAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAATAAAAAAAAAAAAAAAAAGCCAAAAAGAAGAAAGAAAGACAATAATTTGTTTGAATAGTCAATTGTTCAATTATACACAGAAAAGATATATTTAAAAGGTTTTTCCTATTTATCAATTTTCCATATTAAAAGATTGGGATATTTTGCTTTAAGTACTTTTTTTTTCTCCTTTTTTATGTTTTCTTAAAAAAAAAACAAAAGAGTTCTTTTTAAATATAGCAAAAAGAACCAAAATATTTATAAATATAGCAAAATTTCACTATCTATCTACGACAGACCGCGATAAATTACGATAGACTACTATCTATGTCACAATAGCCATAGATAGTAGTCTATCGCAAATATATTATGTATTTTGCTATTAATTATAAATATTTTCAACAATTTTGTTATTTAAGATAATTTTCCAAAACAAAATTCTTTTGAAAACAAAAGTTCGAACAACATTATCACATTTCCTTTCATATTATCTTTTGAAAAATTATTCTAATTATCTCATTTTCTTTTAGTTAAATATGAAGAATGACATTTTTTTCCAACAACTTTCAAGTTCTCAATGCATTATTGTCACACCCAATAACATGTGTGTGTATATATATTTTTTAGTAAACCTAATAACAGATACTAAAAGCCATTTTTCATTTGGAGTATACGTACGCTCAAAATTAAAAAGTACACTAATTAAAATAAATATTTTAATAGAACAAAGACGAAAAGTTGAAAAGCAAAAAATACATAAATCAAAAGTAGTATTTAAACGGGTTTATCTTTATTTTTTTTTTTTTTACATCAGTCAACATGTATTCTGGAGAAATTTTAATTTTCGACTTTATGGCATTATTTCTTCAGAAAATACTGCAAATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACCGATAATTCTCAACCATGGAGGTGGCACGGCGGCGCCACCCCTATTGCGGACATGTGGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGTTTGGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATACCACCTCGAGGTAGGGTGTAAGTATAGCTTAAAATTACATTTTCATCCCTCAATAGTCCATGCATTTTTAGATATCAAATGTTAGTATTTGTATGTTCTATAGATCTTAAATTTAGTCAATATTAGTTTATTAGTGATTTATTTTAATCTTATCTATGGGCTTTCTACTATAAATTTTGAGAATATATTGTATTTCATTCATTATAAATTTTATTATTTAACCCATTTTTACTAGAAAAAATTAATTTCGACGACTGAATTTATGATTTTTTGAAGTACAATGACAAAATTAAACACTTAAAAGTATAGGACTAAATCTCAAGAAACTCCAAAGTATAAAGACCGAAATGATGTATATATTTTTTAGCTCGACTGTAATAGTAAACAAAAATTAAAAAACTATCATTAACCCATTTCTTGATTCTTTTTTTTTTTTTTAATTTTTATATCTATCATCAAGAAAAGTATATAGATGACACATGAAAAGACTATTCATTATTGATCATTTCATAAAATTTTAATTTAGTCAACAATAATTATTTATTGACATTTATTAACTATCATGGTTAAATTTTTTATAACAATTTATTATTGTTAATAAATGATAATTTTTTTTTTCAATTAAACCATTTACATGGTTGATTTATTGATGATTTCATTAAGTATATACTCTTTCCTAATCATATTTTACAAAATTCAATATTTGTTACCTATGTATTTATTTATTTTTTAAAATATCTACTATAAAGTTAATACTATTGAAAGTGTGAATAATGGAGTGTGAGAATTGGAGACCTTACTTTTCAGAAAATTATTAAGTGATTTTCATGACACACGTGCATGAGTTTATAATTTTTATATACATGGATTAATGATTTTCTTCTATGTTATTGAGTTTTGTAAGAAAAGAAATTTATTATTTATTCAAAATTGGCATTCATGTGCATTTCCAGCATTACCTGGCAAAAAAATTATTTTTTATTAGCTACCATTTCTTAAAAAAATTTGGCTTAATATATCCTTCTTTGACGTGTTCAATCATACACTCTAATATAAAATAGATTAAAAAACTATGCATATTGGTGTCTAAATTTAGTTAATGTATTTTTAATAAGTGTCTTTAAAGTTTGTTCGAATGTTAGTTTAATATTGCTTAACAAAAAAATATAGTGTATGTAGCTCTCTCTCTGTAAAATTTGAAAATATATTTGTATTGTGTCCTTTTGTAAATAGCAATAAATATTATTACTTTTTCCAAGTTGGATGAAAAGTATATTTAAACTAATGGTAAAGACTAATTTTAAGAATTATTGAAAGTATGAGATTATTTTAAAGTACATGACTAAAATAAAATGCATTTTATGAAAACAAAAACGATATTTTGACCATAATAATATATGTATAGTTGTCGGAAAACATGTAATTATTTTTAGGGAAAAATGCTCTTTTGGCTCTAGGTTTTGAGTCTAGTTTCCATTTCATCCATAAGTTTCAAAATTTTAAGTTTTGAGTTTGGTTTCAATTTAGTTCTTTGACTCCAAAATATTACACCTTTAATCTTCAAGTTTTTAATTTGATTTTAATGTAGTCGCTATGGAATATACGATGTTGATTTTGATTACAACACGCTTTTGAGGGAACCCAAGGGGGATAGATTCTCTTTTATGTTTCAACAAGACATACCCTTAAATGTAAATGTTGTTAGGGTTGTGTTGATGATGGCAGTTAGAATGTTCCCCCAAAGTATTGAATCCAAAGGTAATGTTATTAAGAATGATAAGTTTTGGACATGAGCAGGTGGAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGATCTTCCATTGATGAATAATGAACATTATGATGGTTCTACTTCCCAATCAGAGCTTGTTACTCTTTCAATGGTTCTTTCTCTCTCTGGATCTCTCTCCCTCTCTTCATATTGAAACTGATCATTTCTATTATTTCTAACAGACAGCGGGTACATCGTACCTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGGTATGAATACGAGATATTTATAGGCTTAATGTTAAAAAACCAAAAACCAAAAACAAAATGGTTACCAAATAGGGCCTTAATTTTTTGTTTTTAGTTTTTGAAAACTAAGGTTTGGTTTTATAATCATTTGAATTTTTTTATATTTTAAAACTAAACTTACAAACACTACCTTCAACTATTGATTTTTTTATTTTGTTATATACCTTTTCATAAGTGTTTTTAAAAAAACGAAACTAACACCCCGTTCGACAACCATTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAAAAAAAATCATTTACCTAACAAATGGAACCTAAATAAAGTAGTTTTTGTTTTTCAAATGTTTAGTTACAAAATCTGAAAACCATGGTAAATAAATAAGAAGAACAAACCATCATTTAAAAAGAAAAGAATGGTTAACAAACGAGGGAGCGTGTAAGGTTTTAAACACTACTACTTCCAATATCTATTAATTTCCTTGTGTTCTGTTATTAATTTTCTAGAAATGTTTTTAATATATATCCATGGTTAATTATCTGTCTTGTTGGAGCTCGGTTAAAAATTCAAACCTTAGCAATGACGATGACCATAGTAAAAAAATTATTAGAGAACAAAGACAAATTTTAAAATTCAAACCATGCAATAAACAAATAATTATCAAATGACACTTGAATTATTCACTCTACAGTAATTAAGTCTTCTTAATCTGGCGAATGGCTTGTATTTAATTTCCTATATTGAGAAATTCATTCCTTAAAATGTTTGGTTCAACGAGAGTAGAGTTGGAGGAGCGAACTATTTTCCATTGATTGAAGTAATTTGTGGTTCTCCGATAAAAACATCATATTTATATTTTGATTTACTTCTTACACTATTGGCCCCACAACTTCACAACTCTCTTGACTTAACAATCACCCTTTATTCCAAAAACACCTCCAATTTATTTTTTTTGAACACCACGGAAAATATGTTTTTTAAAATGTAATTTGATATTTTGACGTTATTTATTTTTTCATTTATTTCTGTTTTATCTTTTTTTTTTTCTTTTGGTTCTATATGGCAATAGAAGGGGAAGTCAGAAGAAAAGAACTCGATTATATAGCTTTACTATGGTTTTATAGAGGTCATTTGTTAGCTAAAGGTTGGTTGTTACTCAGCATAATTCAGAACACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAGAGAAAGGTAACTGAACATGACCAGCTATATATATGTGCGTGTGTCTAACACTTATTAGCTTAAGCTTTCTTCGAGAACCAATGTGTGCGTATATCGCAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACATTCAAGCTTCCCAACTACATTTATCTGCATATATATGATTTGGTTTTGGTGCTATGGCTTTGGGAACAACTTCTCCCTTTTCTTCCTCTACACGGAAGATGAACACAAAATGTATTAGGACCCAATGGATAACATATATATATATATATATATATATATTGTATTTAAACTTTTTAGTTTAATAGTTTCTTTTCTTTTTTTTCTTTTTTTTAATTGACCGAGT

mRNA sequence

CTATTAATCCTTTTATCTTCTCTCTCTTATATAAACCATTTTAATCTTTGCTTTGTGTTTGCCCATTTGCCACCTGTTGCCTTTCTCTCTCCCAACAAAAATTTCTCTCATTGGAAATCTAGAATTTTCTCCCTTCCCAAACACTCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTAATTTCTTCTTCTGCACAATCTTTGAGGCTGTGTTTGGCAATTGGGTATCTCTTGGCTTTACAAAAATTCACTTTCTTTTTTATTATCCCAAACTTTCTTCCACTCCAAAACACTGTCTTGTGTTGAATTTCAATTTCTTTTGGACCCCAAACGCTGGTCTTATCTTCTCTCTACTAAAATACTGCAAATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACCGATAATTCTCAACCATGGAGGTGGCACGGCGGCGCCACCCCTATTGCGGACATGTGGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGTTTGGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATACCACCTCGAGGTGGAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGATCTTCCATTGATGAATAATGAACATTATGATGGTTCTACTTCCCAATCAGAGCTTGTTACTCTTTCAATGACAGCGGGTACATCGTACCTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGAACACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAGAGAAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACATTCAAGCTTCCCAACTACATTTATCTGCATATATATGATTTGGTTTTGGTGCTATGGCTTTGGGAACAACTTCTCCCTTTTCTTCCTCTACACGGAAGATGAACACAAAATGTATTAGGACCCAATGGATAACATATATATATATATATATATATATATTGTATTTAAACTTTTTAGTTTAATAGTTTCTTTTCTTTTTTTTCTTTTTTTTAATTGACCGAGT

Coding sequence (CDS)

ATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACCGATAATTCTCAACCATGGAGGTGGCACGGCGGCGCCACCCCTATTGCGGACATGTGGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGTTTGGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATACCACCTCGAGGTGGAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGATCTTCCATTGATGAATAATGAACATTATGATGGTTCTACTTCCCAATCAGAGCTTGTTACTCTTTCAATGACAGCGGGTACATCGTACCTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGAACACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAGAGAAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACATTCAAGCTTCCCAACTACATTTATCTGCATATATATGA

Protein sequence

MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

Homology

[Close]

BLAST of CcUC04G059640 vs. NCBI nr
Match: XP_008460780.1 (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 1.8e-99
Identity = 205/268 (76.49%), Postives = 220/268 (82.09%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSG 60
           MMS EI+  NR DCDNQQITNY T+NSQP + HGG +  A+M KEEK  WAW KGLVDS 
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSE 60

Query: 61  PRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSY 120
           P P+T+ K M+I   G ESTLP+KSRD S  LPLMNNEHY  STSQ EL+TLSMT  TSY
Sbjct: 61  PVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTTDTSY 120

Query: 121 LYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS 180
            YH PSYGGL S F FQTMHNS++ S MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQS
Sbjct: 121 TYHDPSYGGLPSPFEFQTMHNSDY-SRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQS 180

Query: 181 RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGS 240
           RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD EGS
Sbjct: 181 RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGS 240

Query: 241 NISTLGSESMCNGSSYIQASQLHLSAYI 268
           NIS LGSESMCNGS+  Q SQLHLSAYI
Sbjct: 241 NIS-LGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of CcUC04G059640 vs. NCBI nr
Match: XP_031739714.1 (nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-95
Identity = 197/271 (72.69%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGL 60
           MMS EI+ RN  DCDNQQITNY+T+NSQP R HG      +  A M KEEK  WAW K L
Sbjct: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 60

Query: 61  VDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTA 120
           VDS P  KT+TK + I   G   TLP+KSRD S  LP MNNEHY  STSQSEL++LSMTA
Sbjct: 61  VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 120

Query: 121 GTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR 180
            TSY YH PSYGGL+S FGFQTMHNS+++      RMALPLAMAEEPVYVNAKQYHGILR
Sbjct: 121 NTSYAYHDPSYGGLLSPFGFQTMHNSDYS------RMALPLAMAEEPVYVNAKQYHGILR 180

Query: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDV 240
           RRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD 
Sbjct: 181 RRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDG 240

Query: 241 EGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           EGSNIS LGSESMCNGS   Q SQLHLSAYI
Sbjct: 241 EGSNIS-LGSESMCNGSKCYQGSQLHLSAYI 264

[Close]

BLAST of CcUC04G059640 vs. NCBI nr
Match: XP_004150466.2 (nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-95
Identity = 197/271 (72.69%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGL 60
           MMS EI+ RN  DCDNQQITNY+T+NSQP R HG      +  A M KEEK  WAW K L
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTA 120
           VDS P  KT+TK + I   G   TLP+KSRD S  LP MNNEHY  STSQSEL++LSMTA
Sbjct: 141 VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 200

Query: 121 GTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR 180
            TSY YH PSYGGL+S FGFQTMHNS+++      RMALPLAMAEEPVYVNAKQYHGILR
Sbjct: 201 NTSYAYHDPSYGGLLSPFGFQTMHNSDYS------RMALPLAMAEEPVYVNAKQYHGILR 260

Query: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDV 240
           RRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD 
Sbjct: 261 RRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDG 320

Query: 241 EGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           EGSNIS LGSESMCNGS   Q SQLHLSAYI
Sbjct: 321 EGSNIS-LGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of CcUC04G059640 vs. NCBI nr
Match: XP_022151660.1 (nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia])

HSP 1 Score: 325.9 bits (834), Expect = 3.3e-85
Identity = 194/282 (68.79%), Postives = 212/282 (75.18%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYW 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ W
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 67

Query: 61  AWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSRDASIDLPLMNNEHYDGSTSQ 120
           AW KGLV SGP PKT+ K MQ    PP+GGES   P+KSRDASI LPLMNNEH   STS 
Sbjct: 68  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 127

Query: 121 SELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVY 180
           SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVY
Sbjct: 128 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPVY 187

Query: 181 VNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKA 240
           VNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK 
Sbjct: 188 VNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKV 247

Query: 241 ETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Sbjct: 248 ESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 283

[Close]

BLAST of CcUC04G059640 vs. NCBI nr
Match: XP_022151661.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia])

HSP 1 Score: 325.9 bits (834), Expect = 3.3e-85
Identity = 194/282 (68.79%), Postives = 212/282 (75.18%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYW 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ W
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 60

Query: 61  AWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSRDASIDLPLMNNEHYDGSTSQ 120
           AW KGLV SGP PKT+ K MQ    PP+GGES   P+KSRDASI LPLMNNEH   STS 
Sbjct: 61  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 120

Query: 121 SELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVY 180
           SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVY
Sbjct: 121 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPVY 180

Query: 181 VNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKA 240
           VNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK 
Sbjct: 181 VNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKV 240

Query: 241 ETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Sbjct: 241 ESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 276

[Close]

BLAST of CcUC04G059640 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-24
Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 122 YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 181
           Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 192

Query: 182 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 241
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 193 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 252

Query: 242 STLGSESM 250
           ++ GSE +
Sbjct: 253 NSSGSEQV 258

[Close]

BLAST of CcUC04G059640 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-22
Identity = 65/127 (51.18%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 108 ELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVN 167
           +LV  ++   +S  Y  P Y G+M A+G   +    +   M   RM LP  MA+EPV+VN
Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGG-MPHSRMPLPPEMAQEPVFVN 172

Query: 168 AKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK------ 227
           AKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR RG GGRF  K      
Sbjct: 173 AKQYQAILRRRQARAKAELEKKLIKS-RKPYLHESRHQHAMRRPRGTGGRFAKKTNTEAS 232

Query: 228 KKKAETR 229
           K+KAE +
Sbjct: 233 KRKAEEK 237

[Close]

BLAST of CcUC04G059640 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-21
Identity = 74/175 (42.29%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 84  KSRDASIDLPLMNNEHYDG---STSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMH 143
           + RD+    P+ +  +Y+    S   S+  T +  A   Y Y  P Y  + +       +
Sbjct: 19  EQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAP--PPQPY 78

Query: 144 NSEHNSIMA--QGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY 203
              H  +M   Q  + LP    EEPV+VNAKQYHGILRRRQSRA+ E +N++ +S RKPY
Sbjct: 79  TGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKS-RKPY 138

Query: 204 LHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGS 254
           LHESRHLHA+RR RGCGGRF++ KK+ E     D    E SN+S  G  +M   S
Sbjct: 139 LHESRHLHAIRRPRGCGGRFLNAKKEDEHH--EDSSHEEKSNLSA-GKSAMAASS 187

[Close]

BLAST of CcUC04G059640 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 148 MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA 207
           M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA
Sbjct: 84  MQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKA-KKPYMHESRHLHA 143

Query: 208 MRRERGCGGRFVSKKK-----KAETRVSMDDDDVEGSNISTLGSESMCNGSS 255
           +RR RGCGGRF++ KK     K E   + D++  E S  S+L SE +   +S
Sbjct: 144 IRRPRGCGGRFLNAKKENGDHKEEEEATSDENTSEAS--SSLRSEKLAMATS 192

[Close]

BLAST of CcUC04G059640 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.9e-20
Identity = 56/110 (50.91%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 116 AGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSI-MAQGRMALPLAMAE-EPVYVNAKQYHG 175
           A  S+ Y  P YGGL++A             + M  GR+ LP  + E +PV+VNAKQYH 
Sbjct: 131 ANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHA 190

Query: 176 ILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK 224
           I+RRRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG GGRF++ KK
Sbjct: 191 IMRRRQQRAKLEAQNKLIRA-RKPYLHESRHVHALKRPRGSGGRFLNTKK 239

[Close]

BLAST of CcUC04G059640 vs. ExPASy TrEMBL
Match: A0A1S3CEE5 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.8e-100
Identity = 205/268 (76.49%), Postives = 220/268 (82.09%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSG 60
           MMS EI+  NR DCDNQQITNY T+NSQP + HGG +  A+M KEEK  WAW KGLVDS 
Sbjct: 1   MMSSEIECGNRPDCDNQQITNY-TNNSQPCKLHGGNSTTANMSKEEKRNWAWPKGLVDSE 60

Query: 61  PRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSY 120
           P P+T+ K M+I   G ESTLP+KSRD S  LPLMNNEHY  STSQ EL+TLSMT  TSY
Sbjct: 61  PVPRTSHKEMRITLSGVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLSMTTDTSY 120

Query: 121 LYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS 180
            YH PSYGGL S F FQTMHNS++ S MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQS
Sbjct: 121 TYHDPSYGGLPSPFEFQTMHNSDY-SRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQS 180

Query: 181 RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGS 240
           RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD EGS
Sbjct: 181 RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDDDDGEGS 240

Query: 241 NISTLGSESMCNGSSYIQASQLHLSAYI 268
           NIS LGSESMCNGS+  Q SQLHLSAYI
Sbjct: 241 NIS-LGSESMCNGSNCYQGSQLHLSAYI 265

[Close]

BLAST of CcUC04G059640 vs. ExPASy TrEMBL
Match: A0A0A0KWA0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G159320 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 7.7e-96
Identity = 197/271 (72.69%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGL 60
           MMS EI+ RN  DCDNQQITNY+T+NSQP R HG      +  A M KEEK  WAW K L
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTA 120
           VDS P  KT+TK + I   G   TLP+KSRD S  LP MNNEHY  STSQSEL++LSMTA
Sbjct: 141 VDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTA 200

Query: 121 GTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILR 180
            TSY YH PSYGGL+S FGFQTMHNS+++      RMALPLAMAEEPVYVNAKQYHGILR
Sbjct: 201 NTSYAYHDPSYGGLLSPFGFQTMHNSDYS------RMALPLAMAEEPVYVNAKQYHGILR 260

Query: 181 RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDV 240
           RRQSRAKAEVEN+ISRSQRKPYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD 
Sbjct: 261 RRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDG 320

Query: 241 EGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           EGSNIS LGSESMCNGS   Q SQLHLSAYI
Sbjct: 321 EGSNIS-LGSESMCNGSKCYQGSQLHLSAYI 344

[Close]

BLAST of CcUC04G059640 vs. ExPASy TrEMBL
Match: A0A6J1DFC4 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.6e-85
Identity = 194/282 (68.79%), Postives = 212/282 (75.18%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYW 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ W
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 60

Query: 61  AWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSRDASIDLPLMNNEHYDGSTSQ 120
           AW KGLV SGP PKT+ K MQ    PP+GGES   P+KSRDASI LPLMNNEH   STS 
Sbjct: 61  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 120

Query: 121 SELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVY 180
           SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVY
Sbjct: 121 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPVY 180

Query: 181 VNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKA 240
           VNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK 
Sbjct: 181 VNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKV 240

Query: 241 ETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Sbjct: 241 ESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 276

[Close]

BLAST of CcUC04G059640 vs. ExPASy TrEMBL
Match: A0A6J1DBT5 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.6e-85
Identity = 194/282 (68.79%), Postives = 212/282 (75.18%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYW 60
           MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ W
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 67

Query: 61  AWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSRDASIDLPLMNNEHYDGSTSQ 120
           AW KGLV SGP PKT+ K MQ    PP+GGES   P+KSRDASI LPLMNNEH   STS 
Sbjct: 68  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 127

Query: 121 SELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVY 180
           SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVY
Sbjct: 128 SELVTLPMTA-TSYQYHDACNGGITMPPFGFQTL-NSEYSKV-AHGRMALPLAIAEEPVY 187

Query: 181 VNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKA 240
           VNAKQYHGILRRRQSRAKAEVENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK 
Sbjct: 188 VNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKV 247

Query: 241 ETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Sbjct: 248 ESSASMDDDE-NGSNIS-LGSEPMSNGSSCYEGSGLHLSAYI 283

[Close]

BLAST of CcUC04G059640 vs. ExPASy TrEMBL
Match: A0A6J1EKQ7 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111435455 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 156/270 (57.78%), Postives = 176/270 (65.19%), Query Frame = 0


Query: 1   MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSG 60
           MMS + DYR   D        Y   N QP  W G  T IA + KE+K  W W  GLVD+G
Sbjct: 1   MMSSKTDYRYHPD-------GY---NFQPSWWLGAPTTIA-ISKEDKVNWVWPNGLVDNG 60

Query: 61  PRPKTNTKAMQ---IPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELVTLSMTAG 120
           P+P  +TK +Q    PP  GES +  +S+DASI LPLMNNEHY  ST +        T  
Sbjct: 61  PQPNRSTKEVQETMTPPPYGESIVARQSKDASIVLPLMNNEHYHASTYE--------TTA 120

Query: 121 TSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRR 180
           TSY Y+   YG LM  FGFQT+HNSE+       RM LPLAMAEEPVYVNAKQYHGILRR
Sbjct: 121 TSYQYNDVYYGQLMPPFGFQTLHNSEYT------RMTLPLAMAEEPVYVNAKQYHGILRR 180

Query: 181 RQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVE 240
           RQSRAKAEV N+ISRSQ+KPYLHESRHLHAMRRERGC GRFVSKKK  E   SM DD  +
Sbjct: 181 RQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRFVSKKKTVEPIASMADDG-K 234

Query: 241 GSNISTLGSESMCNGSSYIQASQLHLSAYI 268
           GSN+S          S+  Q S+LHLSAYI
Sbjct: 241 GSNMS----------SNCYQGSELHLSAYI 234

[Close]

BLAST of CcUC04G059640 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 122 YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 181
           Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 192

Query: 182 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 241
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 193 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 252

Query: 242 STLGSESM 250
           ++ GSE +
Sbjct: 253 NSSGSEQV 258

[Close]

BLAST of CcUC04G059640 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 122 YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 181
           Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 191

Query: 182 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 241
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 192 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 251

Query: 242 STLGSESM 250
           ++ GSE +
Sbjct: 252 NSSGSEQV 257

[Close]

BLAST of CcUC04G059640 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 122 YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 181
           Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 191

Query: 182 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 241
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 192 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 251

Query: 242 STLGSESM 250
           ++ GSE +
Sbjct: 252 NSSGSEQV 257

[Close]

BLAST of CcUC04G059640 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 122 YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSR 181
           Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++R
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLG-MPRERTALPLDMAQEPVYVNAKQYEGILRRRKAR 192

Query: 182 AKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNI 241
           AKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K +      +   D   GS  
Sbjct: 193 AKAELERKVIR-DRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSAT 252

Query: 242 STLGSESM 250
           ++ GSE +
Sbjct: 253 NSSGSEQV 258

[Close]

BLAST of CcUC04G059640 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-23
Identity = 65/127 (51.18%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 108 ELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVN 167
           +LV  ++   +S  Y  P Y G+M A+G   +    +   M   RM LP  MA+EPV+VN
Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGG-MPHSRMPLPPEMAQEPVFVN 172

Query: 168 AKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK------ 227
           AKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HAMRR RG GGRF  K      
Sbjct: 173 AKQYQAILRRRQARAKAELEKKLIKS-RKPYLHESRHQHAMRRPRGTGGRFAKKTNTEAS 232

Query: 228 KKKAETR 229
           K+KAE +
Sbjct: 233 KRKAEEK 237

The following BLAST results are available for this feature:

BLAST of CcUC04G059640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460780.1	1.8e-99	76.49	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]	[more]
XP_031739714.1	1.6e-95	72.69	nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]	[more]
XP_004150466.2	1.6e-95	72.69	nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]	[more]
XP_022151660.1	3.3e-85	68.79	nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]	[more]
XP_022151661.1	3.3e-85	68.79	nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]	[more]

BLAST of CcUC04G059640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	2.6e-24	53.13	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	2.4e-22	51.18	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	2.1e-21	42.29	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	3.0e-20	53.57	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	3.9e-20	50.91	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CcUC04G059640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEE5	8.8e-100	76.49	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 P...	[more]
A0A0A0KWA0	7.7e-96	72.69	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G15932...	[more]
A0A6J1DFC4	1.6e-85	68.79	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1DBT5	1.6e-85	68.79	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1EKQ7	1.1e-62	57.78	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CcUC04G059640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	1.9e-25	53.13	nuclear factor Y, subunit A1	[more]
AT5G12840.2	1.9e-25	53.13	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.9e-25	53.13	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.9e-25	53.13	nuclear factor Y, subunit A1	[more]
AT3G20910.1	1.7e-23	51.18	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	GENE3D	6.10.250.2430		coord: 160..223 e-value: 1.0E-30 score: 108.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..84
None	No IPR available	PANTHER	PTHR12632:SF43	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1	coord: 71..247
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 163..185 score: 77.29 coord: 195..218 score: 80.56
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 159..221 e-value: 4.6E-34 score: 129.2
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 162..218 e-value: 3.9E-26 score: 91.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 71..247
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 160..221 score: 37.444942
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 165..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC04G059640.1	CcUC04G059640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity