CcUC03G043120 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTGTTGGATTGAAACTCTGTTTTTTTCCGGGAAAATACGACGCCATGGGAAAGCTTTCCTTCAAGGATTCGCTTAAAGCGCTGGAAGCCGATGTTCAGCATGCCAATACTCTGTAATTCTCTTCCCCTTTTTCTTTGCGAATCTAAAGTTTTTAAAAAATTTTGTTTCTGCAACTTTTTGGCTATAAATCCCCCTCTCGAAAAGCCGAGAATTAAGAAACTGATTCTGACATGTGTATTGCTTGACTTACCTTGTTAACTCTCTCTTTCTTGCTCTGGTTTTCTGTAGAAGATACATATTCTACTGTCTACATTACAACGGACTGTTTACTTCTTGAAACTGTCTACATTGTTGGATGTTGGATAAGCAATATAAATATTCTTCAGTGAATTGTCGAATCAAATTAAGAATGATCTTAAATGCTGCACAGTTGTTTAGTTTCACGATTGTGTGTGGCATGTGTGTGTTTTAATTAATTATGGTTTTTATCAGGAATAGTAAGGAAATTTAATTGTTGGTTGCTCTTTTTGTCGGCCGTGTAAAAGTTGAGCAGTAGGGAACTGAAGAAATATCTGAAATTTGGGGGGGGGGGGAGGGGGGTGGGGGCGGTCAGAATGATAGGAAGTTCATATGAATTAGCATTGTAACTTTCATAATTGTTTTTAATTGGTCAAATTTTCTCTAAACTCTTTTTTTTTTTTATCTTTTCCCTGGTTTTTGCAGTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCATACAGCCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAGTGGACTGATTGTTACCTTGCTGGTGCATTGGGGCTGTTAAGAATCCTTATCTATGTGGTACGTATGATGTATGCCTTTTTCTTTTTGGTTCTATTTGGCAGTGATTACCAGTTGGCTATTGGTCTTTAGTTTTGTGTGTTTGTCTTGATTTTTTTTTTTACTCATTCAAGGGCATCATCTTTACTAACTTTAATTATATCCTGATTGACAACTAAAAAATTTTTTTGAAATAGAAAAGCAAGTCTGATGTTCTTTTCTTGACAATGAAGGTAATTATCATTTAATTACTTCTTGTCTTGTGCAACCATGCTATGATGCAGACTTATCCAGATGGAAAGACCACCATGTCCATTTTTGAGCGAAAAGCAAGCATTAGAGAATTTTATGGTGAGTGAGTGCAGCCTTAGTGAATTTTTACTTTATTAAGTTATAAATGTTGGTGCTATGAATCTGTTTTGGAACTTAGCTTTCTGAACTTCTTCTTCTTGTTCTTTTCTGGTTGGGGTTTTAATGGATTGGCATTCTCATCCACAGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAAGGCATCACAGAATTGGAAGATAGAAAGCAAAAAGAGGTCTGCAGTGCCAGGTACAACAGAAGGGATGAATTTGGAAGGGGGAAACTGTCCGAAATCGACATAGAAAGAGAGAAGGAGTGTGGAATTTGCATGGAGTTTAACGGCATGGTTGTTTTGCCCAACTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGTAAGTATTTGTTTGCGATTAAGGTCCTCTTTGATAGCGACTTTGAGAAGTGGAAAAAAAAAAAAAGAAGTAGAATTCAAGTGCTTTAAAGTGAATGGATAAGTTTACTCTTTAGACATCCCTAAAATTTTCCACTCTTAAGACTAGCAACAGTAGCTCAGCTATAATTGGCATGCACTCCATTTTAAGTTGGAGATTTGATCTCCAGATGGAGTTTTGATCTCCATTCCCGCAATTGCTTTATTAAAGAAACTAATCAAAATAAATAAAAACTATGTACTTAGCATATATGTTGGCAGGTGGAAGTAGGTCTAGACAAAATACATTCTCTCTGGTGGGATAAAATTAAATTCTCTGTTGGATCCGAGGAATCTCCTTAACCATCATGATGTCTGAGTTTGCATTTATTGCTAGCATTCTCAAATTCATATTCAACCTCATCTTCTTTCAATCTTTCTATCAATGACTAGAATCTTGTCTGTCTGTTTCATCCTCCAGGTGCGGTCGTTCTCAATCGTGTCCCTTCTGTCGAGATAGCCTCAAGAGAGTCAACTCTGGCGACCTTTGGATCTTCACAGAAAAGAGTGAAATAATTGATCTAACTTCGATTTTGCAGGACAACCGCAAGAGACTATTTGCATACATTGATAAGTTGCCATTGGTTGTTCCAGATCCAATGTTTCTTCCTCTTGATTCTCATATTAGGTGAGAGAATGTGGGACATACTTTTTCAATCTGTGAGTATTAGTTTTGATCCAAAAAAATCTGTGAGTATTAGTTGAACTTTTCTGTATATATAATTATAGCTTGATGAGATAAGTTAGGAAATGTAAAATGGGGTTTCTC TTTTTTTTTTTGTTGGATTGAAACTCTGTTTTTTTCCGGGAAAATACGACGCCATGGGAAAGCTTTCCTTCAAGGATTCGCTTAAAGCGCTGGAAGCCGATGTTCAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCATACAGCCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAGTGGACTGATTGTTACCTTGCTGGTGCATTGGGGCTGTTAAGAATCCTTATCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTTTGAGCGAAAAGCAAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAAGGCATCACAGAATTGGAAGATAGAAAGCAAAAAGAGGTCTGCAGTGCCAGGTACAACAGAAGGGATGAATTTGGAAGGGGGAAACTGTCCGAAATCGACATAGAAAGAGAGAAGGAGTGTGGAATTTGCATGGAGTTTAACGGCATGGTTGTTTTGCCCAACTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGTGCGGTCGTTCTCAATCGTGTCCCTTCTGTCGAGATAGCCTCAAGAGAGTCAACTCTGGCGACCTTTGGATCTTCACAGAAAAGAGTGAAATAATTGATCTAACTTCGATTTTGCAGGACAACCGCAAGAGACTATTTGCATACATTGATAAGTTGCCATTGGTTGTTCCAGATCCAATGTTTCTTCCTCTTGATTCTCATATTAGGTGAGAGAATGTGGGACATACTTTTTCAATCTGTGAGTATTAGTTTTGATCCAAAAAAATCTGTGAGTATTAGTTGAACTTTTCTGTATATATAATTATAGCTTGATGAGATAAGTTAGGAAATGTAAAATGGGGTTTCTC ATGGGAAAGCTTTCCTTCAAGGATTCGCTTAAAGCGCTGGAAGCCGATGTTCAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGATTATCATACAGCCCTGCTGCTCCCTTTTTCCTTTTTCTTGTTCAGTGGACTGATTGTTACCTTGCTGGTGCATTGGGGCTGTTAAGAATCCTTATCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTTTGAGCGAAAAGCAAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAAGGCATCACAGAATTGGAAGATAGAAAGCAAAAAGAGGTCTGCAGTGCCAGGTACAACAGAAGGGATGAATTTGGAAGGGGGAAACTGTCCGAAATCGACATAGAAAGAGAGAAGGAGTGTGGAATTTGCATGGAGTTTAACGGCATGGTTGTTTTGCCCAACTGCAACCATTCTTTGTGCTTGAAGTGTTATCGAGATTGGTGCGGTCGTTCTCAATCGTGTCCCTTCTGTCGAGATAGCCTCAAGAGAGTCAACTCTGGCGACCTTTGGATCTTCACAGAAAAGAGTGAAATAATTGATCTAACTTCGATTTTGCAGGACAACCGCAAGAGACTATTTGCATACATTGATAAGTTGCCATTGGTTGTTCCAGATCCAATGTTTCTTCCTCTTGATTCTCATATTAGGTGA MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMSIFERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCSARYNRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWCGRSQSCPFCRDSLKRVNSGDLWIFTEKSEIIDLTSILQDNRKRLFAYIDKLPLVVPDPMFLPLDSHIR Homology
BLAST of CcUC03G043120 vs. NCBI nr
Match: XP_038893737.1 (E3 ubiquitin-protein ligase AIRP2 [Benincasa hispida]) HSP 1 Score: 488.0 bits (1255), Expect = 4.6e-134 Identity = 234/243 (96.30%), Postives = 241/243 (99.18%), Query Frame = 0
BLAST of CcUC03G043120 vs. NCBI nr
Match: XP_011658560.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus]) HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-133 Identity = 233/243 (95.88%), Postives = 240/243 (98.77%), Query Frame = 0
BLAST of CcUC03G043120 vs. NCBI nr
Match: KAA0031815.1 (E3 ubiquitin-protein ligase RNF8-A [Cucumis melo var. makuwa] >TYJ97319.1 E3 ubiquitin-protein ligase RNF8-A [Cucumis melo var. makuwa]) HSP 1 Score: 478.8 bits (1231), Expect = 2.8e-131 Identity = 229/243 (94.24%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of CcUC03G043120 vs. NCBI nr
Match: XP_008457378.1 (PREDICTED: E3 ubiquitin-protein ligase RNF8-A [Cucumis melo]) HSP 1 Score: 478.8 bits (1231), Expect = 2.8e-131 Identity = 229/243 (94.24%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of CcUC03G043120 vs. NCBI nr
Match: KAG6583367.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019140.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 474.2 bits (1219), Expect = 6.9e-130 Identity = 228/243 (93.83%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 5.4e-93 Identity = 162/233 (69.53%), Postives = 188/233 (80.69%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05 Identity = 26/77 (33.77%), Postives = 36/77 (46.75%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05 Identity = 28/78 (35.90%), Postives = 37/78 (47.44%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3) HSP 1 Score: 50.8 bits (120), Expect = 2.5e-05 Identity = 30/82 (36.59%), Postives = 38/82 (46.34%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy Swiss-Prot
Match: Q9TT91 (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.5e-05 Identity = 30/82 (36.59%), Postives = 38/82 (46.34%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy TrEMBL
Match: A0A0A0LY84 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 8.5e-134 Identity = 233/243 (95.88%), Postives = 240/243 (98.77%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy TrEMBL
Match: A0A5A7SRP4 (E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001250 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131 Identity = 229/243 (94.24%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy TrEMBL
Match: A0A1S3C5C5 (E3 ubiquitin-protein ligase RNF8-A OS=Cucumis melo OX=3656 GN=LOC103497086 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131 Identity = 229/243 (94.24%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy TrEMBL
Match: A0A6J1I3Y6 (E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469447 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129 Identity = 226/243 (93.00%), Postives = 236/243 (97.12%), Query Frame = 0
BLAST of CcUC03G043120 vs. ExPASy TrEMBL
Match: A0A6J1HMH6 (E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111464952 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129 Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0
BLAST of CcUC03G043120 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein ) HSP 1 Score: 384.4 bits (986), Expect = 6.7e-107 Identity = 179/245 (73.06%), Postives = 212/245 (86.53%), Query Frame = 0
BLAST of CcUC03G043120 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein ) HSP 1 Score: 375.6 bits (963), Expect = 3.1e-104 Identity = 179/257 (69.65%), Postives = 212/257 (82.49%), Query Frame = 0
BLAST of CcUC03G043120 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein ) HSP 1 Score: 372.1 bits (954), Expect = 3.4e-103 Identity = 176/245 (71.84%), Postives = 209/245 (85.31%), Query Frame = 0
BLAST of CcUC03G043120 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein ) HSP 1 Score: 342.4 bits (877), Expect = 2.9e-94 Identity = 166/245 (67.76%), Postives = 197/245 (80.41%), Query Frame = 0
BLAST of CcUC03G043120 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein ) HSP 1 Score: 342.0 bits (876), Expect = 3.8e-94 Identity = 162/233 (69.53%), Postives = 188/233 (80.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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