CcUC01G013990 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G013990
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 26768507 .. 26773854 (+)
RNA-Seq ExpressionCcUC01G013990
SyntenyCcUC01G013990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGTTAAGAGATGCAATTTCGTATGTCAGAGGTTAGTCGGCGTGGTTTAGTCATCTGTCAACGTCTTGAGATGATTGAAACTAATATTCTCAGGTTCAAAGTCAATTTAAAATATTCTTTCAATCAAGCAAAATTAATTTAATTTTACATTTCTAAACGTTTTTTTTTTTTATATTATTAAAATTTGATTTGAAATAATTAACATATTTTTAGTGATTTTAAAAATGATTTTAACCATTTCAAAATCATTCTTAAATATTCACTATGTTTAAACATATTTTGAAGATATAATTTCACACCAAATATAAATCCTCATAATACTATGAATGCATAATATCCTTTAAAAAATATTACTAAAATATGTATAATATATATTTCTTTTTATTAAAAAACACTTCTAATCCTAAAATTTCATAAAAGCAACTATTTAGTCTTTGAATTCTAGTTCGTAATGATTTAGTCTTCGTATTTTCAATTTTGTAACAATTTAGTCATGAACTTTAGTATGAAACAATTTAGTCTTTATACTTTCAAATTTGTAACAATTTAGCTTCTAACTTAAAAAAATATATCAAAATTATATGTTAATTTTTATTATTTTATGATGTAGACTTTGTATTTGATAAAAATATTGAGCCTCTAATTAGTTTATCGGTTTATTTATGCAAAATATCTCATTAAATCTTAACATTAACTTTTACAATAGAGACTAAATTGTTATATTACAAAGTTCAAAGACTAAATTGTTACAAACCAAAGTTCAGAGACTAACAATAATCTGGTTAAAAATCACTTTTAGAAGTAACAATCTAGCACCTGAACTTTGATTTGTAACGATTTAGTCTATATACTTTTAATTTTGTATTAATTTAGTCTCTAGACTTTACTACGTAACAATTTAGTCCTTATACTTTAAAATTTGTAATGATTTAATTCCTATTATAGAAACTAGTGTTAAAATTTAATAAAATTTCTTGCATAAACAAACTAATAAACTAATTAGAGATTCAATATTTTTACAAAATACATAGTCTATATCATAAAATAACAAAAATTGACATTTAATTTTGATGATTTTTTTTTAATGTTAAGAACTAAATTGTTACAAATTTAAGTACATGAATTAAATTGTTATATAGTAAAGTTCAAGGACTAAATTATTACAAAATTAAAAGTAAATGGATTAAATCGTTACAAACTAAAATTTTGGGACAAAAAATGTTTTTTAACCAAATAATTTTTAACCTTATTTTTTTTTTTTTGTCCTCAAAACATAACTCAACATATACTTCCAATCAAGAAGTCCTTTGAAAGTCGATTCCAACGTCGAAAAAACGATTTCTCTCGATTGGACGGCTGGTTATGGGAGATCCTAAAATGAAGGGGGAAAGAAAGAAAGCCTGTGGTTTTGCAGGATTCATAACATTTGTCAATGATATTAGTTCATATGAGAATTAAAATCTAGTTTTAAACAAACACTGCATAGTATACTTATTGGAGTAAATCTTCAAGCTGGTTCTCTTATGATATAAATGGTTGCTGCTCCCTCCAAGGAACCTTCAGATTTGAGTTCAAGTTACACAACCTTAACACATTCTGTAGCTTCCAGAACAACAATTCAAAAAACTTGCCAAAAACTTTTTAGCCTTTCAAATCAGCTACAAGTCAGAAGCAGAAGCAGCACAAAAGTGAGTAGGAGCACCAGGTTGCTCCACGAGTTCGTCAACCGACTTGCACGAGACGGAGGAGGGGACGGTGTTGGACTGGAGCTTCCAACTGTTGATGTCACTTTTTCCAACGAGCAAGTGTATTTACAACGACTAGGTGGGACGACCCTGTAAACTCCACTGCTGGTTAGAATGTAAATGTCTTTGTCATTGTCCTCACCAAATGAGAAGACATAACCCAGAGCTGGGAGAGAGCTTCCCGGAGTGGAACTACAAGCTATAGGGGAATCAGGTGCACAACTGAAAAGAATCTTATTTGTGGTAAAGTTTCCACTGTTTTCTGGGCTTTCAATTCCTGCCCATATAGCAGAGGCATACAAATCTCCATACAAGTACCTGTTAAAAAACAACAGAATGAGACTGAATTAAAATGATTCTTTTTTCCTGAACAGTTTCATTTCAGACACTCTGAACATATAAATATACGTACGTACCTTCCATACATACACGGATCGGTCTTAGATCGATAGAAGTATCCCCCTGTTATTGATGCAGAACCTATATTCTTGTTCATTGAAGAATGGTTGTAGCCCATCACTGGGAAGATTGGATTAATGGAGTCTACAGGTGTGGATCCTCCGGGGGCTGAGTTTGGGACAAAGAAAAGAGGACCCTCGTAAACGCGCCAACCATAATTTCCACCCTTTGTGATGATGTCCACCTCTTCGTATCGATCCTGTAAGAAAAGAACAGGTAGAGTGAATTCAGCGTTGTTCATTAAGAGTAGCATAATAAACTATAACATTAAAATTTAAAAGGAACTAAAGGTTATCCTGATGCCACTACTCGACTAGAACATGAACTTGAACTGGTTTGTTCAAACTCTACTAGAACTTGAACTGCCACAACATCCAGCATAATTTGGGGGTTTAATTTTTGCTCTTTCAAACGAACTACTATTTAGATTTACTTTTATTGACCTCTCAGTACAGAAGTGTAAGAGTAAAATTCGAACCTGTCCAACATCTCCACACATGAAGTAGAGAGGTCTTTCTGAATCGAAACTGCAGCGCCAAGGATTTCTCAATCCATAAGCCCATATTTCCGGCTGCGCTCCTTGATCTTCAACAAATGGGTTATCCTTAGGAATAGTATAGTTTCCCCATAAATCAAGTTTACCAATATCTTCTGGACCTGTACCAAGTAATGAGAACAGAACGAGAGGAATTACGTACTTGTATTCATCAAAGAATAGTCGAGATGAAGATGACATTAACAGTTACATTAAAAAGGTCCGACAATCCGACTCCATCAACTGCAGTGGCAGAATGCGTAGAGAATAGCGATCCCACAGAAAACCAAGATTTCTTAAAGGATGTAACTTCATAGTAAAAGTTTAACACTTACTTGGAAAGTTATTGACATCAAGCCTCATAATCTTCCCAAGCAATGACTTCTTGTTCTGGGCAAAATTGTAAGGATCACCTTGACTGCCACCGTCTCCCATCATGAAATAAAGATAACCATCTGGCCCGAAGAGTATCTGTCCCCCATGATGAGCAGTAAATGGAAGGCCAATCGTGATTATTCTTCTTACTTCTGATGGCTTTGCAGTTGTTGCCTGAAAATAAGAATTGGCATTCCTTTAGATTCCACAAGTTACAATCCAGTAAACATACAAAAATACGTGTACTGTCTAGAGATTTTATACCAATGAAGGCTGGGATGCACTGCCATTAACGGTGTACTCTGCGACAACACTTTGATGCTGACACGGTTGGGATCCGCTATCAGATGGTAGTTTGGAAGGGTCACAATTAACATCAGAATTACAAGAACATCTTCCAGAGCACCCTGGCCACTTAACCTTGTCACAATTGAAAGAAGCAAAGAATCTCCCATTTTGTGCAAAGTTTGGATGAAATGCAAGGCCCATCATGCCAAATTGAGTATCAAAGTTAACTACATCGGTTAAATCAACAAACGGGTTAGATTCATCGAGCCCCAACACTCCTCCCGACCCCTTCTCAGGAATAGTTGCCAACCAAATCTTGCCCGCTTGGCTAGAGAAGAATGCACGATCAGATCCATCAGGATGGGCCACCATATTCAGGTAAGATCCATTCCCAATTTTCTCAAGACACAAGCCATTTGGAGGGCTAGGAAGTTCGGTATTGTTAAGGGACACAGGTTCACCAACAAAGCAGACTGATTCTTCTGTGGATGCTCCGCCAAATGCGCTGCAAAAGTCAGCCTTCGACTGCCATAGATCTGAGAGCTTGCTAGTACTGGAGTTGGTAGGTACTCCAGCTCGACCCTGTAACGAAGGGGCAAAGGGGGAGTTGACTATGGCTACATTTTGGCATGTGTCCCACACTGTAGAGCAGAAGTCAGTAGCTGCTTGGTTGGATTGTGGTGATTTTTCTGAAGTGGAGTTGCAGAGAAGAGGAACTGGCCTAGGCGTCGAATTGACTTGATATAGATCACCAGAAAATGGATCACACCTCTGAAGATATCATATAAAAAGGAAGAAAAAATTTGTAAAGGCTTGAGATACTGATACCACAAGTAAAATAACATCCAAGATGATCATCAAACAAGTCCAAAAAGTCAACCACTAATGTTCATATTAGGGTTAAAAAGCTAAGATTTAATGCTTATTTGTTAACAAAAGTAGAAAAACTATACTCACAGCCTTCATCCCAAAACCTTGTATTGATGTCTTTCTGTAGCATCAAGTGAATGGTATAGCTGTATAATCCTAACTTGTTTATGATGGTTTAACAGGTGTAAAGGTCATTTGACTTAAAAGTTTCTATCTAGGATTAAAAATTCTCATCTCCACTCATATCATTATCAAAAACAAGAATTCAAGAGTAAGGCTGATGGAAGAAGAGGTGGAAAGAAGATTGGAGAAACTAACTACTCTTCTCAAATCATTTAGGCAATGTTTGTCAACCAACTGATTCTTGGTTTTTGATTGTTGAAAATTGTGCTTGTTTCACACAATTTCACCTTAGACAAATTGCAAAAGCAAAAACAAGTTTTTAAAAACTACTTCTTTTGGTTTTCAAATTTTGGCTTGGATTTTAAAAACACTCCTAAAATGTGAACAACACGACACACAAATCAATATATGAAAGTGGTGACTACAAACTTAATTTTCAAAAACCAAAAACCAAAAACAAAACAATTACCAAACCAAGCCTTAGTTACTATCACAACATGACATAATCCCTTCAGAACCTCCTCAAAAACTTCAGGCAAACGAGAATTTATTATTCAGCAACAGATAAAAAAGAGACATAACAAGAACAATCAGCTATGCCATATATAGAAAGAAAGGGGAAATTATGTGTTTTCTTTAGGGGATCATCAGGTCTTACCGCACAGACAATGGATTTGATAAGAGAAGCACAAGCAGGATCAGAAATGTTCATCCCTTGGAATTGTCTCTGTATAACCCCATCTTGTGTAGAGTCACAGCAAAGACTCCCGTTATAAGGACAAAACTTCAATGTGGTGTTCAAAGTAAAGGGAGCCGCTACAGAGAAAGAAAATCACAAGATCTCAACAAGAAACTTAAGCACCAAAGCAGTAGGAGGGCATTGAGATTTGAAACAGAAGAATTAGCAAACATTAAACGAAGTAAAAGAGAAGAACAAGAACCTACTTGA

mRNA sequence

ATGCATCTACAAGTCAGAAGCAGAAGCAGCACAAAAGTGAGTAGGAGCACCAGGTTGCTCCACGAGTTCGTCAACCGACTTGCACGAGACGGAGGAGGGGACGGTGTTGGACTGGAGCTTCCAACTGTTGATGTCACTTTTTCCAACGAGCAAGGGATCATCAGGTCTTACCGCACAGACAATGGATTTGATAAGAGAAGCACAAGCAGGATCAGAAATGTTCATCCCTTGGAATTGTCTCTGTATAACCCCATCTTGTGTAGAGTCACAGCAAAGACTCCCGTTATAAGGACAAAACTTCAATGTGGTGTTCAAAGTAAAGGGAGCCGCTACAGAGAAAGAAAATCACAAGATCTCAACAAGAAACTTAAGCACCAAAGCAGTAGGAGGGCATTGAGATTTGAAACAGAAGAATTAGCAAACATTAAACGAAGTAAAAGAGAAGAACAAGAACCTACTTGA

Coding sequence (CDS)

ATGCATCTACAAGTCAGAAGCAGAAGCAGCACAAAAGTGAGTAGGAGCACCAGGTTGCTCCACGAGTTCGTCAACCGACTTGCACGAGACGGAGGAGGGGACGGTGTTGGACTGGAGCTTCCAACTGTTGATGTCACTTTTTCCAACGAGCAAGGGATCATCAGGTCTTACCGCACAGACAATGGATTTGATAAGAGAAGCACAAGCAGGATCAGAAATGTTCATCCCTTGGAATTGTCTCTGTATAACCCCATCTTGTGTAGAGTCACAGCAAAGACTCCCGTTATAAGGACAAAACTTCAATGTGGTGTTCAAAGTAAAGGGAGCCGCTACAGAGAAAGAAAATCACAAGATCTCAACAAGAAACTTAAGCACCAAAGCAGTAGGAGGGCATTGAGATTTGAAACAGAAGAATTAGCAAACATTAAACGAAGTAAAAGAGAAGAACAAGAACCTACTTGA

Protein sequence

MHLQVRSRSSTKVSRSTRLLHEFVNRLARDGGGDGVGLELPTVDVTFSNEQGIIRSYRTDNGFDKRSTSRIRNVHPLELSLYNPILCRVTAKTPVIRTKLQCGVQSKGSRYRERKSQDLNKKLKHQSSRRALRFETEELANIKRSKREEQEPT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G013990.1CcUC01G013990.1mRNA