CcUC01G004590 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G004590
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr01: 4612368 .. 4615019 (-)
RNA-Seq Expression	CcUC01G004590
Synteny	CcUC01G004590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTTAAAATTTTTTATTATCTTTTTATCATTTTTTACACGTCAACTACTACATCTATTTCATCTGAAAAAATTTTCAGGACAAAGGATACATTGACATCATCTAAAAAAAAAAAAAAACACATCATTTTATGAAAATGATGTTGTAAATAATGTCAAACCTTTTACCCATCAAATTTAGGGTGTTTTTGAAATATATTTTCAAGTGTTTAAATATAAAAAATAAGTCATTTTGAAAAAATCGAAATTTTTAGCAACTACTCAAAATAGAATTTGAAATGTATTTTTAAATAATTTTTATCAAAAGAGTTTAAATAAAAATAAATTTTTTGAGAAACACTTCTTTCACAAATCAATCCACACGTTGGCAATTGCCTTTCATTAAAAAAAATTCTCATACATGCTCCTAAGTCAGTCCTAACTGATACAATAATACACCAATTGGTGGTTTTGCACAACACATCTCAAAGAAAGAGAGAAATCCAAAGGAAAAGAACAAACCCATTATAGAAAACTGCAATCTTTTTCAAAAGGAAAGAAAAGAAAAGAAAATCCATCTCTAAGCTACTTATGTACTATGAGTTTTGCTCTGGCATGGCCTTCATTGATTTGAAACTGTTCTCCAAGCCCAAAATGTGCCATCAATAACCAAACTATAGTTATGAGCTCTCCTCCTTTACTAACCTGTTGAGCATGTTGGTCTGGTCTGCAATGGCTGGCTGCATATCCCAACATTTCAATCCAAACTTTGCTCATTATCTCCCATTTCTTTTCACACTTTTGTAGCTTCTTAGCAAGTAATGAACCATTAAACAGTACAGATTTGCTTTTATCTCCCTTCACTTCTACAGGTTTCGCATCGTTTACATTCACTTCAAGTATTCCGTGACAAGCCTCTGTGGTTGTAAGTTCACTTGAGCTACAGTCGAATCCTCTTCGGTCGAAGAACTTTTTTGCCTCGGCGCAAGTGTCCCTGAACCTTATTTCCCCGATTCCAGCCACGGCTGACATCATTGAGGGGAGCATCACTATGAGGTAGAGCATGTAATCTGATAAGAGCTTGCTGCATTCGCGATACGTAGTGGCGTCAGCGTCGGCGTCGGCGTTTGTGTTTTGTTTGTTTCTGTAGCAAAGTTCTGTTGCTATGTGCCACAGCATAAGGCTCTCATCAAAAGCTACTTCATCAATGTCGGATATTAACTCGCCGATGTCAATTTCCGATGGAAGCTCCATTATTTTCAGTACATAGGAGCCTCTAGATGAACATATTTCTTCAGTAACTTCTACACTTTCTGCTGCTTTGGACTTTTCAAGCATCTCGTTAAAGATCAAATCCCAAAGCTTCTCCAAAACTGGTTGCCTGGAGACATATTTCCAATCATCAAGGAACTCTTTGGCGCCTAAATAATCAATGACGAAATCATTTATACAACGAAAAAAACGAACTGTTTTATTGATCCAAGCAAGATAGAAGCCACAAAAGACTGATCTGTTTCTTGAATCATCAATTGGGATGCGTTCACTAAGGCAATATGCTATCAAATTGAACTGAGACACAGACTCGCGCCACCGGCGGAACATCCGTGGAGTGTCCAGCTTCTTAAACCCTGAAAATGGAGACTTCTTATGAACAGACTCTCGTCTCTGTCCTTTGAGCCGGAGTAAGCGTTCAAAACAAGTGGCAAAAATTGAATCATCCTTTATACGCGTAGCTATAGTCCAATCAGAGAAGACAGTCATGGAAATGGATAGAAAATCTAAAGCTAAGGCCCCAATAAGCAAAGCATAAGTAATCCTTACATCAATTTTCCTAAAATCAGTTTTATCCAATCTGCTAAACAATACCAAAGCCACAATCACAGAACACAGAGAAATGAGTCTAAAAATCATCCCAAATATATTATGAAGAACCACCACTTTGGTGAAGAGAACTTCATATATGAAGTTAAGCTCAACCTCAATCACTTTGAGGGCATCCTTCGGCTTTCTCTTCAAAAAGAAATCCCTGCTTTCATTTCTCTCCTTAAAGCTAAAAATCAAATCAACAATCAAACCCTTGAATTTGTTAAAGTAAAGAAAGGCATATTGAACAACCTCAAGCTGACTCAGATCACCCTCTTTTGCAGTGCTAGTGAAAGGACTCCATTCTTGATTAGGTTCACGCACAAGTTGAATGGTAGTTGGCAAATGGCCAGCTTTCTTACAAGTAAATTCCTCCATTAATTTAGCATAATCAGGACCTGGGTCAGGCTCTTTAAGCATGGAAGCTCTGAAACTCCTCAAACTCGCCAAATACAAAGCCCTAGTTCGCTCGGCGTACTTGATAATTCCTGCAAGAAACATCAAAATGGCAGGAACCCAGAGCTTGTTTCGAGGAATGGTTTGAATAAAGACATAAACAGTGGCAACGACCTGAAAAACCAATCCGATCAAATGGCGAAGCCAGAGAGCGTTGTCTTCGAGAGCGAAAGCGGTAATGGTGTCGGGGCCGCCGAGATGGAGGAGAAGAAAAGGAGCCCAGAAGGCGAGAAGGTCGATATTGGCGTCGGATTTGCTCTGGTTGTTGGAAATTAGGCCGACAATGAAACTGGCGGTCCAATCGGCGAGGAGATAGGCGGACCAGATGAGGAAGATGGGGAGTTTTCTTGA

mRNA sequence

ATGATGACCTGGGTCAGGCTCTTTAAGCATGGAAGCTCTGAAACTCCTCAAACTCGCCAAATACAAAGCCCTAGTTCGCTCGGCGTACTTGATAATTCCTGCAAGAAACATCAAAATGGCAGGAACCCAGAGCTTGTTTCGAGGAATGGTTTGAATAAAGACATAAACAGTGGCAACGACCTGAAAAACCAATCCGATCAAATGGCGAAGCCAGAGAGCGTTGTCTTCGAGAGCGAAAGCGGTAATGGTGTCGGGGCCGCCGAGATGGAGGAGAAGAAAAGGAGCCCAGAAGGCGAGAAGGTCGATATTGGCGTCGGATTTGCTCTGGCCGACAATGAAACTGGCGGTCCAATCGGCGAGGAGATAGGCGGACCAGATGAGGAAGATGGGGAGTTTTCTTGA

Coding sequence (CDS)

ATGATGACCTGGGTCAGGCTCTTTAAGCATGGAAGCTCTGAAACTCCTCAAACTCGCCAAATACAAAGCCCTAGTTCGCTCGGCGTACTTGATAATTCCTGCAAGAAACATCAAAATGGCAGGAACCCAGAGCTTGTTTCGAGGAATGGTTTGAATAAAGACATAAACAGTGGCAACGACCTGAAAAACCAATCCGATCAAATGGCGAAGCCAGAGAGCGTTGTCTTCGAGAGCGAAAGCGGTAATGGTGTCGGGGCCGCCGAGATGGAGGAGAAGAAAAGGAGCCCAGAAGGCGAGAAGGTCGATATTGGCGTCGGATTTGCTCTGGCCGACAATGAAACTGGCGGTCCAATCGGCGAGGAGATAGGCGGACCAGATGAGGAAGATGGGGAGTTTTCTTGA

Protein sequence

MMTWVRLFKHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNGLNKDINSGNDLKNQSDQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFALADNETGGPIGEEIGGPDEEDGEFS

Homology

[Close]

BLAST of CcUC01G004590 vs. NCBI nr
Match: OAY69950.1 (hypothetical protein ACMD2_07718 [Ananas comosus])

HSP 1 Score: 74.7 bits (182), Expect = 6.7e-10
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 5   VRLFKHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNGLNKDINSGNDLKNQ 64
           V L +HG+++      +++  +LGVLD++  +H++G + + V+  G  +D     +L+ +
Sbjct: 51  VGLAEHGAAQAVGAPTVEAVGALGVLDDADDEHEDGGDDKRVALEGAEEDGGGREELEEE 110

Query: 65  SDQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEK------------------------ 124
           +D++A PE VV   E G+GVGAAE+EE++  PEGE                         
Sbjct: 111 ADEVAAPELVVLNREGGDGVGAAEVEEEEGGPEGEDDGAAGVVTAAAAAAAAASAARGGG 170

Query: 125 ----------VDIGVGF-ALADNETGGPIGEEIGGPDEEDGE 132
                      D+  G    A+ E G P+GEE+ GPD+E GE
Sbjct: 171 GVGGDGGGGGADVAEGVEEEAEAEVGDPVGEEVAGPDDEAGE 212

[Close]

BLAST of CcUC01G004590 vs. NCBI nr
Match: OAY64800.1 (hypothetical protein ACMD2_17917 [Ananas comosus])

HSP 1 Score: 74.3 bits (181), Expect = 8.7e-10
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 9   KHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNGLNKDINSGNDLKNQSDQM 68
           +HG ++      ++    LGVLD++  +H++GR  E V+  G  +D     +L+ ++D++
Sbjct: 105 EHGFAQAVGAPAVEGVGPLGVLDDADDEHEDGREDEGVAMEGAEEDGGGSEELEEEADEV 164

Query: 69  AKPESVVFESESGNGVGAAEMEEKKRSPEGE---KVDIGVGFALADNETGGPIGEEIGG 125
           A PE VV + E G+GV AAE+EE++R PEG+    V   V  A AD   GG +G   GG
Sbjct: 165 AAPELVVLDGEGGDGVRAAEVEEEERRPEGKDDGAVAAAVAAAAADIGLGGDVGHRDGG 223

[Close]

BLAST of CcUC01G004590 vs. NCBI nr
Match: BAF07339.1 (Os01g0953000 [Oryza sativa Japonica Group] >BAS76262.1 Os01g0953000 [Oryza sativa Japonica Group])

HSP 1 Score: 67.8 bits (164), Expect = 8.2e-08
Identity = 43/134 (32.09%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 9   KHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNG---LNKDINSGNDLKNQS 68
           +HG+ E    R+++ P  L VLD++  +H++GR+ E  +R G   L  D+    DL +++
Sbjct: 116 QHGAPEAAHARRLERPCPLAVLDDAGDEHEDGRDEE--ARGGGARLPVDVEGEGDLGDEA 175

Query: 69  DQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFA-----------LADNET 128
           +++A+PE VV + E G+GV  AE+E+++  PE E+V +                +A+   
Sbjct: 176 EEVAEPELVVLDGECGDGVLPAEVEDEEGRPEDEEVHVAAAVGAVAAELLVLGEVAEGVD 235

[Close]

BLAST of CcUC01G004590 vs. NCBI nr
Match: KAB8085252.1 (hypothetical protein EE612_008024 [Oryza sativa])

HSP 1 Score: 67.8 bits (164), Expect = 8.2e-08
Identity = 43/134 (32.09%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 9   KHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNG---LNKDINSGNDLKNQS 68
           +HG+ E    R+++ P  L VLD++  +H++GR+ E  +R G   L  D+    DL +++
Sbjct: 116 QHGAPEAAHARRLERPCPLAVLDDAGDEHEDGRDEE--ARGGGARLPVDVEGEGDLGDEA 175

Query: 69  DQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFA-----------LADNET 128
           +++A+PE VV + E G+GV  AE+E+++  PE E+V +                +A+   
Sbjct: 176 EEVAEPELVVLDGERGDGVLPAEVEDEEGRPEDEEVHVAAAVGAVAAELLVLGEVAEGVD 235

[Close]

BLAST of CcUC01G004590 vs. NCBI nr
Match: THU46993.1 (hypothetical protein C4D60_Mb09t10810 [Musa balbisiana])

HSP 1 Score: 54.3 bits (129), Expect = 9.3e-04
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 58  GNDLKNQS----DQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFA----- 117
           GND +N +    +Q+A+P+ +V E   G GVGAAE+EE++ SPEG +V + V FA     
Sbjct: 39  GNDSRNSTMAMPNQVAQPQLIVLEGVGGGGVGAAEVEEEEGSPEGGEVAVDVLFARLGLV 98

Query: 118 ---LADNETGGPIGEEIGGPDEE 129
              +A+ + G  IG ++G P++E
Sbjct: 99  VEEVAERQGGDVIGAQVGSPEDE 121

[Close]

BLAST of CcUC01G004590 vs. ExPASy TrEMBL
Match: A0A199UZ84 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_07718 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.2e-10
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 5   VRLFKHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNGLNKDINSGNDLKNQ 64
           V L +HG+++      +++  +LGVLD++  +H++G + + V+  G  +D     +L+ +
Sbjct: 51  VGLAEHGAAQAVGAPTVEAVGALGVLDDADDEHEDGGDDKRVALEGAEEDGGGREELEEE 110

Query: 65  SDQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEK------------------------ 124
           +D++A PE VV   E G+GVGAAE+EE++  PEGE                         
Sbjct: 111 ADEVAAPELVVLNREGGDGVGAAEVEEEEGGPEGEDDGAAGVVTAAAAAAAAASAARGGG 170

Query: 125 ----------VDIGVGF-ALADNETGGPIGEEIGGPDEEDGE 132
                      D+  G    A+ E G P+GEE+ GPD+E GE
Sbjct: 171 GVGGDGGGGGADVAEGVEEEAEAEVGDPVGEEVAGPDDEAGE 212

[Close]

BLAST of CcUC01G004590 vs. ExPASy TrEMBL
Match: A0A199UJP7 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_17917 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 9   KHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNGLNKDINSGNDLKNQSDQM 68
           +HG ++      ++    LGVLD++  +H++GR  E V+  G  +D     +L+ ++D++
Sbjct: 105 EHGFAQAVGAPAVEGVGPLGVLDDADDEHEDGREDEGVAMEGAEEDGGGSEELEEEADEV 164

Query: 69  AKPESVVFESESGNGVGAAEMEEKKRSPEGE---KVDIGVGFALADNETGGPIGEEIGG 125
           A PE VV + E G+GV AAE+EE++R PEG+    V   V  A AD   GG +G   GG
Sbjct: 165 AAPELVVLDGEGGDGVRAAEVEEEERRPEGKDDGAVAAAVAAAAADIGLGGDVGHRDGG 223

[Close]

BLAST of CcUC01G004590 vs. ExPASy TrEMBL
Match: A0A0P0VCY8 (Os01g0953000 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0953000 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-08
Identity = 43/134 (32.09%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 9   KHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNG---LNKDINSGNDLKNQS 68
           +HG+ E    R+++ P  L VLD++  +H++GR+ E  +R G   L  D+    DL +++
Sbjct: 116 QHGAPEAAHARRLERPCPLAVLDDAGDEHEDGRDEE--ARGGGARLPVDVEGEGDLGDEA 175

Query: 69  DQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFA-----------LADNET 128
           +++A+PE VV + E G+GV  AE+E+++  PE E+V +                +A+   
Sbjct: 176 EEVAEPELVVLDGECGDGVLPAEVEDEEGRPEDEEVHVAAAVGAVAAELLVLGEVAEGVD 235

[Close]

BLAST of CcUC01G004590 vs. ExPASy TrEMBL
Match: Q0JFY9 (Os01g0953000 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0953000 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-08
Identity = 43/134 (32.09%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 9   KHGSSETPQTRQIQSPSSLGVLDNSCKKHQNGRNPELVSRNG---LNKDINSGNDLKNQS 68
           +HG+ E    R+++ P  L VLD++  +H++GR+ E  +R G   L  D+    DL +++
Sbjct: 116 QHGAPEAAHARRLERPCPLAVLDDAGDEHEDGRDEE--ARGGGARLPVDVEGEGDLGDEA 175

Query: 69  DQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFA-----------LADNET 128
           +++A+PE VV + E G+GV  AE+E+++  PE E+V +                +A+   
Sbjct: 176 EEVAEPELVVLDGECGDGVLPAEVEDEEGRPEDEEVHVAAAVGAVAAELLVLGEVAEGVD 235

[Close]

BLAST of CcUC01G004590 vs. ExPASy TrEMBL
Match: A0A4S8IFK6 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb09t10810 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.5e-04
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 58  GNDLKNQS----DQMAKPESVVFESESGNGVGAAEMEEKKRSPEGEKVDIGVGFA----- 117
           GND +N +    +Q+A+P+ +V E   G GVGAAE+EE++ SPEG +V + V FA     
Sbjct: 39  GNDSRNSTMAMPNQVAQPQLIVLEGVGGGGVGAAEVEEEEGSPEGGEVAVDVLFARLGLV 98

Query: 118 ---LADNETGGPIGEEIGGPDEE 129
              +A+ + G  IG ++G P++E
Sbjct: 99  VEEVAERQGGDVIGAQVGSPEDE 121

The following BLAST results are available for this feature:

BLAST of CcUC01G004590 vs. NCBI nr


Match Name	E-value	Identity	Description
OAY69950.1	6.7e-10	30.86	hypothetical protein ACMD2_07718 [Ananas comosus]	[more]
OAY64800.1	8.7e-10	36.97	hypothetical protein ACMD2_17917 [Ananas comosus]	[more]
BAF07339.1	8.2e-08	32.09	Os01g0953000 [Oryza sativa Japonica Group] >BAS76262.1 Os01g0953000 [Oryza sativ...	[more]
KAB8085252.1	8.2e-08	32.09	hypothetical protein EE612_008024 [Oryza sativa]	[more]
THU46993.1	9.3e-04	39.76	hypothetical protein C4D60_Mb09t10810 [Musa balbisiana]	[more]

BLAST of CcUC01G004590 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC01G004590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A199UZ84	3.2e-10	30.86	Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_07718 PE=4 SV=1	[more]
A0A199UJP7	4.2e-10	36.97	Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_17917 PE=4 SV=1	[more]
A0A0P0VCY8	3.9e-08	32.09	Os01g0953000 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0953000 PE...	[more]
Q0JFY9	3.9e-08	32.09	Os01g0953000 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0953000 PE...	[more]
A0A4S8IFK6	4.5e-04	39.76	Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb09t10810 PE=4 SV=...	[more]

BLAST of CcUC01G004590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G004590.1	CcUC01G004590.1	mRNA