Carg28128 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg28128
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1218)
Location	Carg_Chr04: 15163000 .. 15165408 (+)
RNA-Seq Expression	Carg28128
Synteny	Carg28128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACTTTTCTCACTCGCAGTCTTAAGCTCAGTTCTCCCTGGTTGCGATTTGTGAGAGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTAGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGTATGAGCCAGCCCCCCTTTCTGAAATTTTGCTTTTACTGTTTGAATTATTTGTGCTTTTATGAATGTGGGGTTTTCTGAGCTGGAAAGTTTTTGCATCTTTGTGATTTGATGTTGTTCTTGGATTGTTCTTGAATGGAGATTTGTGCTGAAATGTTTATTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGTTTACTGCATTTTGATTCTTGTTTTCAATGGAGAGATATGATTCATTATTTGATCTATAAATTAGTTGTTATTTGGATCTGTAAATTAGTTCATAAGTATCATCACGTCTGTATAACAGTCAGGACCATTTAGCTTTGCATTTTTGATAATTCAGAAAGATGTGTAAAGTTAAGGCATGAAAATTGGAAACAGCACAAATTTACCACTTGGTTGTACTCCCTGGTGAAGTAAATTGAATATGCATTATGATGAGGGTTATGTATATACTTTAACAGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGTGAGAATTTCTTCTTCTTCCTTTTGTTTTTCCAGAACAATGAACAATAATGTGCTGTTATTTGTGGAACAAATACTCTGTTATGCTCTTACCTCCTATTTTTACCACGATACATGTTATTCTTAGCAAGTTTGCATTCAGTTATCAATATTTTTTTTACATGTTGCTAGGTTTTTGGTTCTGTAACCCGATGAAAACTCTAGCAAATTGGATGTAAGAACCCTTGTCCATATGCAAATCCCTAGATCACATATACTAAAGCTTCAAATCAAGATGCTTTAATTCCAAACGATATGGAACTCTTAGAAATTCGATCTACCAACCTTATTGAAAAATAAAACTTTTAGATTTAAAATATCCAAGAACCCCAAAATGATAAGGAATCAGCCCAGAAAAAGTAAAATCTAGATTACCTAGTTGATCAAATATCTTAAGGTAAGAAAACTTATTTGAGATTTCCAATCACTCCATAAGTAAAATTAATCGAGTCACATGCAACATAAACTACATAGATTGCAGAGAGACATAGCTCTAGGCTAAAAAGATGCACAAATTACTACTTTTTTCTAGCCTCTTTTACAAATACAATCATGAAACTCTTGGCCTTCCACGAGATGTTTCAATAGTTTAACCTTCAAAGTTTATGACCATAATTAACCATCATATGCATCTCAAAAGTAAATAAAAAATATTAAAACTGAAAATACACTAATAAAACACTAAAGATCCAAAAACTGTAGATTTCAATCATCCACCTAAGAATTTGTAACCATTTATAGAATTTGTAACCATCCTAGAATAAATGATGTCTCCCTTAAAATAGTTTGAATCCATTGTTGCTTTAGTTAAGTTTGACTTTACTTTAACGTGGCATAAAATGCAACTTAAGTTGAACTTTAACCAAACTTGACTTGTGTGTGTGGCATTGATATTGTTTAAGGTACTACAAGAAATGTGCTACCCTTTTTTCCTCTCTGCCATTTGAAATTGGAGGAGGAAGATAATTGATGTATTTAAAAGTTTCCATGGGTGTTAAACTCGGATTATGCCTCGATATGTGGGTTTTCTTTTCTACGGATCTGTTGATAGCATAGGTTAAATAAATGTAGCTGACCCAAGTTACGAAACTCATATTTTATGCTACCTATAAACTTCTGCTGATCATAGATTTATATGAACTTCTATTTCCAATAGGCCCTTTTTCTGCACCATTTTGTTTAGGCGATGAGCCACACCTCAACTACAGGCTTGTTTTTGCTCAAGACTAAAATCTTTTTGAACATCTTACAAATCTTCAGGGCAACCTTTATAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTTCTCAAGCATCGCACAAAGCAAAGCGTTCGAGTTCAACGGTTGGGATGACAGGGTATGCCTAA

mRNA sequence

ACACTTTTCTCACTCGCAGTCTTAAGCTCAGTTCTCCCTGGTTGCGATTTGTGAGAGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTAGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGGCAACCTTTATAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTTCTCAAGCATCGCACAAAGCAAAGCGTTCGAGTTCAACGGTTGGGATGACAGGGTATGCCTAA

Coding sequence (CDS)

ATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTAGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGGCAACCTTTATAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTTCTCAAGCATCGCACAAAGCAAAGCGTTCGAGTTCAACGGTTGGGATGACAGGGTATGCCTAA

Protein sequence

MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKRSSSTVGMTGYA

Homology

[Close]

BLAST of Carg28128 vs. NCBI nr
Match: KAG6601784.1 (hypothetical protein SDJN03_07017, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032499.1 hypothetical protein SDJN02_06548 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378.3 bits (970), Expect = 4.1e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
           GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 191

[Close]

BLAST of Carg28128 vs. NCBI nr
Match: XP_022952500.1 (uncharacterized protein LOC111455168 [Cucurbita moschata])

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
           GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATF+VAEACLIAGAAKNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQ SHKAKR
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 191

[Close]

BLAST of Carg28128 vs. NCBI nr
Match: XP_022971781.1 (uncharacterized protein LOC111470459 [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99
Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
           GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVY+YMYFTKATSSSQASHKAKR
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYFYMYFTKATSSSQASHKAKR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMT YA
Sbjct: 181 SSSTVGMTEYA 191

[Close]

BLAST of Carg28128 vs. NCBI nr
Match: XP_023538980.1 (uncharacterized protein LOC111799749 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
           GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQASHKAKR
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQASHKAKR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of Carg28128 vs. NCBI nr
Match: XP_008465787.1 (PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 180/191 (94.24%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFGRPLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGRPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQASHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQASHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of Carg28128 vs. ExPASy TrEMBL
Match: A0A6J1GLY4 (uncharacterized protein LOC111455168 OS=Cucurbita moschata OX=3662 GN=LOC111455168 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.5e-101
Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
           GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATF+VAEACLIAGAAKNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQ SHKAKR
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 191

[Close]

BLAST of Carg28128 vs. ExPASy TrEMBL
Match: A0A6J1I460 (uncharacterized protein LOC111470459 OS=Cucurbita maxima OX=3661 GN=LOC111470459 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.8e-100
Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
           GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA
Sbjct: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVY+YMYFTKATSSSQASHKAKR
Sbjct: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYFYMYFTKATSSSQASHKAKR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMT YA
Sbjct: 181 SSSTVGMTEYA 191

[Close]

BLAST of Carg28128 vs. ExPASy TrEMBL
Match: A0A1S3CPP1 (uncharacterized protein LOC103503388 OS=Cucumis melo OX=3656 GN=LOC103503388 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.8e-94
Identity = 180/191 (94.24%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFGRPLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGRPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQASHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQASHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of Carg28128 vs. ExPASy TrEMBL
Match: A0A0A0KQ16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373210 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.4e-93
Identity = 178/191 (93.19%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFG+PLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQ SHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQTSHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of Carg28128 vs. ExPASy TrEMBL
Match: A0A6J1DLS4 (uncharacterized protein LOC111022343 OS=Momordica charantia OX=3673 GN=LOC111022343 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.4e-93
Identity = 177/191 (92.67%), Postives = 181/191 (94.76%), Query Frame = 0


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGT+FEDK +N TYCVYDSDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTMFEDKLKNETYCVYDSDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYF SSWATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFFSSWATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT S+Q SHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-STQGSHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGM GYA
Sbjct: 181 SSSTVGMAGYA 190

[Close]

BLAST of Carg28128 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 278.5 bits (711), Expect = 4.1e-75
Identity = 140/190 (73.68%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGK STLV +LVV L LVAFGFSIAAERRRS+G   +D   N T+CVYDSDVATGYGVG 
Sbjct: 3   EGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLS ESLLM VTKCMCFGRPL PG +RAW+IIYF+SSW TF+VAEAC+IAGA KNAY
Sbjct: 63  FLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKRS 181
           HTKY   + +Q  +C +LRKG+FIAGAVF+VATM+LNVYYYMYFTK+ SS  A HKA RS
Sbjct: 123 HTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPA-HKANRS 182

Query: 182 SSTVGMTGYA 192
           SS +GM GYA
Sbjct: 183 SSNIGMAGYA 188

[Close]

BLAST of Carg28128 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43
Identity = 85/167 (50.90%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S +V  +V V  L+AFG ++AAE+RRS   + +D E    YCVYDSD ATGYGVG FLF 
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
           ++ + L+M V++C C G+PL PGG+RA A+I F+ SW  F++AE CL+AG+ +NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 126 RGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSS 173
           R M       C+TLRKGVF AGA FV    I++ +YY ++  A  +S
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEAS 169

[Close]

BLAST of Carg28128 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-40
Identity = 82/178 (46.07%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S L+ LLV V  L+AFG ++AAE+RR+   +  +  R+ +YCVYD D+ATG GVG FL L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRE-SRDLSYCVYDKDIATGLGVGSFLVL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
           L+ + L+M  ++C+C GR LTP G+R+WAI  F+++W  F +A+ CL+AG+ +NAYHTKY
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKY 122

Query: 126 RGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASHKAKRSSS 184
           R      + +C +LRKGVF AGA F+V T I++  YY+  ++A     +     R SS
Sbjct: 123 RVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKDFQPSRDPGIRMSS 179

[Close]

BLAST of Carg28128 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39
Identity = 78/169 (46.15%), Postives = 116/169 (68.64%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D+++   YCVY +D+AT YG G F+ L
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
              + L+M  ++C C G+ L PGG+RA AII FL  W  F++AE CL+A + +NAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 126 RGMIYAQN-LACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQ 174
           R M   ++  +CE +RKGVF AGA F + T I++ +YY+ +++A  + Q
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAYQ 171

[Close]

BLAST of Carg28128 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D E+   +C Y SD+AT YG G F+ L
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
              + ++M  ++C C G+ L PGG+RA  I+ FL  W  F++AE CL+AG+ +NAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 126 RGMIYAQN-LACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQASH 177
           R M   +N  +CE +RKGVF AGA F + T I++ +YY+ +++A    Q  H
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQTPH 174

The following BLAST results are available for this feature:

BLAST of Carg28128 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601784.1	4.1e-101	100.00	hypothetical protein SDJN03_07017, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022952500.1	1.5e-100	98.95	uncharacterized protein LOC111455168 [Cucurbita moschata]	[more]
XP_022971781.1	1.0e-99	98.95	uncharacterized protein LOC111470459 [Cucurbita maxima]	[more]
XP_023538980.1	2.9e-99	99.48	uncharacterized protein LOC111799749 [Cucurbita pepo subsp. pepo]	[more]
XP_008465787.1	1.4e-93	94.24	PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo]	[more]

BLAST of Carg28128 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg28128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLY4	7.5e-101	98.95	uncharacterized protein LOC111455168 OS=Cucurbita moschata OX=3662 GN=LOC1114551...	[more]
A0A6J1I460	4.8e-100	98.95	uncharacterized protein LOC111470459 OS=Cucurbita maxima OX=3661 GN=LOC111470459...	[more]
A0A1S3CPP1	6.8e-94	94.24	uncharacterized protein LOC103503388 OS=Cucumis melo OX=3656 GN=LOC103503388 PE=...	[more]
A0A0A0KQ16	4.4e-93	93.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373210 PE=4 SV=1	[more]
A0A6J1DLS4	4.4e-93	92.67	uncharacterized protein LOC111022343 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Carg28128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13380.1	4.1e-75	73.68	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	1.1e-43	50.90	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	3.3e-40	46.07	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	1.2e-39	46.15	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	1.0e-38	45.35	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 62..156 e-value: 1.6E-22 score: 79.8
None	No IPR available	PANTHER	PTHR31769:SF5	EXPRESSED PROTEIN	coord: 3..191
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg28128-RA	Carg28128-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane